Wall clock time and date at job start Sun Mar 7 2021 07:05:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86297 * 109.47282 * 2 1 4 4 C 1.50701 * 109.47444 * 120.00660 * 2 1 3 5 5 C 1.38244 * 119.97024 * 245.02051 * 4 2 1 6 6 C 1.38293 * 120.11243 * 179.97438 * 5 4 2 7 7 C 1.38126 * 120.05244 * 359.68366 * 6 5 4 8 8 C 1.38753 * 119.94449 * 0.59316 * 7 6 5 9 9 O 1.35904 * 120.05582 * 179.70317 * 8 7 6 10 10 C 1.42897 * 116.99621 * 359.72387 * 9 8 7 11 11 C 1.50698 * 109.46726 * 179.97438 * 10 9 8 12 12 O 1.21284 * 120.00445 * 0.02562 * 11 10 9 13 13 N 1.34776 * 120.00045 * 179.97438 * 11 10 9 14 14 C 1.46497 * 120.00076 * 180.02562 * 13 11 10 15 15 H 1.09001 * 112.85363 * 23.80270 * 14 13 11 16 16 C 1.53780 * 113.61615 * 155.00346 * 14 13 11 17 17 C 1.53782 * 87.08158 * 89.11617 * 16 14 13 18 18 H 1.08997 * 113.61302 * 270.79655 * 17 16 14 19 19 C 1.52999 * 113.61350 * 139.98492 * 17 16 14 20 20 N 1.46502 * 109.47056 * 176.53073 * 19 17 16 21 21 C 1.35315 * 125.87191 * 125.00095 * 20 19 17 22 22 C 1.35344 * 106.17731 * 179.73450 * 21 20 19 23 23 N 1.33776 * 106.49718 * 359.97438 * 22 21 20 24 24 N 1.28633 * 108.88517 * 359.97438 * 23 22 21 25 25 C 1.53772 * 87.17261 * 25.39155 * 17 16 14 26 26 C 1.38160 * 119.97430 * 64.99500 * 4 2 1 27 27 H 0.96706 * 113.99788 * 299.99693 * 1 2 3 28 28 H 1.09006 * 109.47228 * 240.00145 * 2 1 3 29 29 H 1.48493 * 110.00037 * 300.00450 * 3 2 1 30 30 H 1.48510 * 109.99643 * 61.32341 * 3 2 1 31 31 H 1.08001 * 119.94615 * 359.97438 * 5 4 2 32 32 H 1.07997 * 119.97277 * 179.97438 * 6 5 4 33 33 H 1.08001 * 120.02480 * 180.31892 * 7 6 5 34 34 H 1.09001 * 109.47214 * 60.00399 * 10 9 8 35 35 H 1.09004 * 109.47295 * 299.99896 * 10 9 8 36 36 H 0.96999 * 119.99836 * 0.02562 * 13 11 10 37 37 H 1.09000 * 113.61547 * 334.56974 * 16 14 13 38 38 H 1.09003 * 113.61640 * 203.66305 * 16 14 13 39 39 H 1.09004 * 109.47423 * 56.53031 * 19 17 16 40 40 H 1.09002 * 109.47147 * 296.52962 * 19 17 16 41 41 H 1.07998 * 126.90914 * 359.71348 * 21 20 19 42 42 H 1.08000 * 126.75529 * 179.97438 * 22 21 20 43 43 H 1.09003 * 113.61404 * 89.15886 * 25 17 16 44 44 H 1.08997 * 113.61534 * 220.05938 * 25 17 16 45 45 H 1.07998 * 120.02856 * 0.04709 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6384 -0.0118 2.1911 6 6 3.1004 -0.6608 3.3215 7 6 2.8506 -2.0079 3.4964 8 6 2.1461 -2.7128 2.5309 9 8 1.9043 -4.0397 2.6978 10 6 2.4098 -4.6464 3.8887 11 6 2.0472 -6.1090 3.9002 12 8 1.4181 -6.5851 2.9790 13 7 2.4227 -6.8883 4.9337 14 6 2.0706 -8.3103 4.9446 15 1 1.8920 -8.7099 3.9463 16 6 3.0194 -9.1734 5.7929 17 6 2.0932 -8.8803 6.9850 18 1 2.3623 -7.9790 7.5357 19 6 1.8668 -10.0880 7.8967 20 7 1.0437 -9.6886 9.0409 21 6 -0.1177 -10.2684 9.4231 22 6 -0.5328 -9.5937 10.5205 23 7 0.3832 -8.6469 10.7533 24 7 1.3046 -8.7302 9.8596 25 6 0.9681 -8.6630 5.9596 26 6 1.6845 -2.0596 1.3975 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 1.5614 2.4679 -1.2084 30 1 1.5879 2.4585 1.2244 31 1 2.8303 1.0428 2.0586 32 1 3.6528 -0.1128 4.0704 33 1 3.2071 -2.5132 4.3819 34 1 1.9729 -4.1573 4.7594 35 1 3.4943 -4.5403 3.9184 36 1 2.9261 -6.5077 5.6703 37 1 4.0174 -8.7485 5.9006 38 1 3.0345 -10.2231 5.4996 39 1 2.8277 -10.4599 8.2525 40 1 1.3571 -10.8737 7.3390 41 1 -0.6137 -11.1017 8.9478 42 1 -1.4274 -9.7825 11.0952 43 1 0.4213 -9.5729 5.7119 44 1 0.3124 -7.8266 6.2016 45 1 1.1325 -2.6051 0.6466 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567714_4860298.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:07 Heat of formation + Delta-G solvation = 63.874178 kcal Electronic energy + Delta-G solvation = -28494.439003 eV Core-core repulsion = 24289.840399 eV Total energy + Delta-G solvation = -4204.598604 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -44.19181 -41.75798 -41.16739 -39.83063 -38.82498 -37.30319 -35.87950 -34.31136 -32.52943 -31.98321 -31.73020 -30.13148 -28.92973 -27.08808 -26.83077 -24.97295 -23.72476 -23.65320 -22.90778 -22.40099 -21.75082 -20.51278 -19.39501 -18.89051 -18.45634 -17.75472 -17.69917 -17.47762 -17.29646 -17.07321 -16.81285 -16.19857 -16.17826 -15.85800 -15.73653 -15.45410 -15.23599 -15.04126 -14.90913 -14.73214 -14.31210 -14.13702 -13.97120 -13.85948 -13.57667 -13.18002 -13.01730 -12.81755 -12.60237 -12.48912 -12.21283 -11.99736 -11.97588 -11.85783 -11.74814 -11.58650 -11.03063 -10.97287 -10.63512 -10.35632 -10.30981 -9.97863 -9.30713 -4.95870 0.16543 0.37005 0.62733 1.22323 1.29195 1.35738 1.37004 1.59581 1.66138 1.96024 2.44564 2.62704 3.01660 3.08887 3.21680 3.34496 3.39222 3.45434 3.52785 3.60498 3.68734 3.69783 3.83059 3.83904 3.85429 3.97995 4.05699 4.11649 4.16187 4.28211 4.32471 4.34877 4.35902 4.51478 4.53843 4.57357 4.62375 4.71261 4.76594 4.84679 4.93559 5.19478 5.21107 5.28290 5.31970 5.40648 5.56550 5.61007 6.13598 6.30320 6.40720 6.97051 7.56155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.078 4.078 3 Si 0.692 3.308 4 C -0.078 4.078 5 C -0.155 4.155 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.128 3.872 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.520 3.480 12 O -0.508 6.508 13 N -0.712 5.712 14 C 0.125 3.875 15 H 0.111 0.889 16 C -0.133 4.133 17 C -0.128 4.128 18 H 0.109 0.891 19 C 0.123 3.877 20 N -0.289 5.289 21 C -0.051 4.051 22 C -0.051 4.051 23 N -0.272 5.272 24 N -0.086 5.086 25 C -0.149 4.149 26 C -0.120 4.120 27 H 0.376 0.624 28 H 0.121 0.879 29 H -0.257 1.257 30 H -0.260 1.260 31 H 0.130 0.870 32 H 0.131 0.869 33 H 0.130 0.870 34 H 0.095 0.905 35 H 0.097 0.903 36 H 0.404 0.596 37 H 0.084 0.916 38 H 0.104 0.896 39 H 0.103 0.897 40 H 0.109 0.891 41 H 0.190 0.810 42 H 0.190 0.810 43 H 0.096 0.904 44 H 0.075 0.925 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.726 -2.886 1.617 5.769 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.187 4.187 3 Si 0.593 3.407 4 C -0.078 4.078 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.038 4.038 11 C 0.304 3.696 12 O -0.381 6.381 13 N -0.366 5.366 14 C 0.019 3.981 15 H 0.129 0.871 16 C -0.172 4.172 17 C -0.147 4.147 18 H 0.127 0.873 19 C 0.002 3.998 20 N -0.082 5.082 21 C -0.201 4.201 22 C -0.209 4.209 23 N -0.138 5.138 24 N -0.066 5.066 25 C -0.187 4.187 26 C -0.139 4.139 27 H 0.224 0.776 28 H 0.138 0.862 29 H -0.182 1.182 30 H -0.185 1.185 31 H 0.147 0.853 32 H 0.149 0.851 33 H 0.148 0.852 34 H 0.113 0.887 35 H 0.114 0.886 36 H 0.239 0.761 37 H 0.103 0.897 38 H 0.122 0.878 39 H 0.121 0.879 40 H 0.127 0.873 41 H 0.207 0.793 42 H 0.207 0.793 43 H 0.114 0.886 44 H 0.093 0.907 45 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 5.027 -1.717 0.584 5.344 hybrid contribution -1.478 -1.046 0.959 2.049 sum 3.549 -2.762 1.543 4.754 Atomic orbital electron populations 1.86625 1.17474 1.79990 1.49259 1.25106 0.84145 1.11180 0.98287 0.94880 0.91605 0.74096 0.80127 1.20090 0.97784 0.93491 0.96451 1.21002 1.01205 1.00012 0.95021 1.20913 0.97560 0.93576 0.97009 1.21305 1.04728 0.96106 1.00262 1.19039 0.95485 0.82378 0.94801 1.86168 1.73805 1.20171 1.39928 1.22444 1.00796 0.91679 0.88883 1.20050 0.79644 0.87531 0.82328 1.90795 1.37733 1.74586 1.35034 1.45471 1.58406 1.09259 1.23438 1.21802 0.95493 0.80316 1.00449 0.87122 1.23339 0.98502 1.01433 0.93925 1.23032 0.98510 0.98493 0.94660 0.87314 1.22231 0.95864 0.98152 0.83512 1.47498 1.16939 1.22213 1.21592 1.23733 0.90858 1.04432 1.01118 1.23685 1.02261 0.96169 0.98742 1.75157 1.00832 1.20266 1.17502 1.78272 1.21175 1.07744 0.99429 1.23595 0.96688 1.03037 0.95407 1.20280 1.02764 0.93659 0.97156 0.77604 0.86166 1.18197 1.18504 0.85271 0.85066 0.85237 0.88705 0.88554 0.76126 0.89734 0.87778 0.87867 0.87268 0.79274 0.79309 0.88561 0.90661 0.84627 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.03 12.83 -35.23 -0.45 -1.48 16 2 C -0.08 -0.02 2.80 36.01 0.10 0.08 16 3 Si 0.69 -0.60 29.88 -169.99 -5.08 -5.68 16 4 C -0.08 -0.06 5.35 -104.65 -0.56 -0.62 16 5 C -0.15 0.05 8.67 -39.56 -0.34 -0.29 16 6 C -0.07 0.06 10.04 -39.60 -0.40 -0.34 16 7 C -0.21 0.07 9.04 -39.43 -0.36 -0.29 16 8 C 0.13 0.25 6.69 -39.21 -0.26 -0.02 16 9 O -0.29 -0.84 9.67 -39.35 -0.38 -1.22 16 10 C 0.04 -0.04 5.22 36.00 0.19 0.14 16 11 C 0.52 0.46 7.91 -10.99 -0.09 0.37 16 12 O -0.51 -2.99 16.10 -14.36 -0.23 -3.22 16 13 N -0.71 1.76 5.26 -52.93 -0.28 1.48 16 14 C 0.12 -0.33 4.33 -67.03 -0.29 -0.62 16 15 H 0.11 -0.09 7.46 -51.93 -0.39 -0.48 16 16 C -0.13 0.69 7.39 -25.92 -0.19 0.50 16 17 C -0.13 0.53 3.70 -89.81 -0.33 0.20 16 18 H 0.11 -0.30 7.95 -51.93 -0.41 -0.72 16 19 C 0.12 -0.53 6.28 -4.04 -0.03 -0.55 16 20 N -0.29 0.13 3.44 -61.26 -0.21 -0.08 16 21 C -0.05 0.06 11.57 -17.05 -0.20 -0.13 16 22 C -0.05 -0.05 12.05 -17.74 -0.21 -0.26 16 23 N -0.27 -1.21 12.41 30.23 0.38 -0.83 16 24 N -0.09 -0.28 12.79 60.35 0.77 0.49 16 25 C -0.15 0.43 7.44 -25.83 -0.19 0.24 16 26 C -0.12 -0.27 9.62 -39.43 -0.38 -0.65 16 27 H 0.38 -0.36 8.70 45.56 0.40 0.03 16 28 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 29 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 30 H -0.26 -0.23 7.01 56.52 0.40 0.16 16 31 H 0.13 -0.26 4.84 -52.49 -0.25 -0.51 16 32 H 0.13 -0.40 8.06 -52.49 -0.42 -0.83 16 33 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 34 H 0.10 -0.31 7.65 -51.93 -0.40 -0.71 16 35 H 0.10 -0.37 7.67 -51.93 -0.40 -0.76 16 36 H 0.40 -2.10 8.70 -40.82 -0.36 -2.46 16 37 H 0.08 -0.46 8.14 -51.93 -0.42 -0.89 16 38 H 0.10 -0.67 8.10 -51.93 -0.42 -1.09 16 39 H 0.10 -0.52 8.14 -51.93 -0.42 -0.95 16 40 H 0.11 -0.73 7.80 -51.93 -0.41 -1.14 16 41 H 0.19 -0.98 8.06 -52.49 -0.42 -1.40 16 42 H 0.19 -0.36 8.06 -52.49 -0.42 -0.79 16 43 H 0.10 -0.38 7.92 -51.93 -0.41 -0.79 16 44 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.14 0.39 8.06 -52.49 -0.42 -0.03 16 LS Contribution 382.29 15.07 5.76 5.76 Total: 0.00 -13.01 382.29 -9.21 -22.23 By element: Atomic # 1 Polarization: -9.27 SS G_CDS: -5.95 Total: -15.22 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -3.54 Total: -2.24 kcal Atomic # 7 Polarization: 0.40 SS G_CDS: 0.66 Total: 1.06 kcal Atomic # 8 Polarization: -4.85 SS G_CDS: -1.06 Total: -5.92 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.08 Total: -5.68 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -13.01 -9.21 -22.23 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_4860298.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.103 kcal (2) G-P(sol) polarization free energy of solvation -13.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.215 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.229 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.874 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds