Wall clock time and date at job start Sun Mar 7 2021 07:05:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35906 * 116.99689 * 2 1 4 4 C 1.38618 * 120.02296 * 180.27831 * 3 2 1 5 5 C 1.38660 * 119.88530 * 180.20829 * 4 3 2 6 6 O 1.35895 * 120.02409 * 179.79484 * 5 4 3 7 7 C 1.42900 * 117.00155 * 359.71343 * 6 5 4 8 8 C 1.50701 * 109.47168 * 180.02562 * 7 6 5 9 9 O 1.21276 * 119.99882 * 0.02562 * 8 7 6 10 10 N 1.34771 * 120.00086 * 180.02562 * 8 7 6 11 11 C 1.46505 * 120.00229 * 180.02562 * 10 8 7 12 12 H 1.08995 * 112.84790 * 336.20262 * 11 10 8 13 13 C 1.53782 * 113.61044 * 107.50298 * 11 10 8 14 14 C 1.53782 * 87.07859 * 89.12081 * 13 11 10 15 15 H 1.09000 * 113.68767 * 270.86497 * 14 13 11 16 16 C 1.53005 * 113.61559 * 139.97940 * 14 13 11 17 17 N 1.46500 * 109.47040 * 87.49830 * 16 14 13 18 18 C 1.35312 * 125.86582 * 124.99824 * 17 16 14 19 19 C 1.35359 * 106.17441 * 179.77310 * 18 17 16 20 20 N 1.33772 * 106.49554 * 0.22938 * 19 18 17 21 21 N 1.28640 * 108.88426 * 359.97438 * 20 19 18 22 22 C 1.53773 * 113.61452 * 205.00119 * 11 10 8 23 23 C 1.38755 * 119.94421 * 359.50921 * 5 4 3 24 24 C 1.50702 * 119.96838 * 180.23457 * 23 5 4 25 25 O 1.42902 * 109.46984 * 285.00037 * 24 23 5 26 26 Si 1.86297 * 109.46793 * 165.00308 * 24 23 5 27 27 C 1.38196 * 120.05361 * 0.25894 * 23 5 4 28 28 C 1.38154 * 120.11232 * 359.97438 * 27 23 5 29 29 H 1.08998 * 109.47252 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.46993 * 299.99973 * 1 2 3 31 31 H 1.09000 * 109.47135 * 60.00008 * 1 2 3 32 32 H 1.07995 * 120.05881 * 359.96871 * 4 3 2 33 33 H 1.09001 * 109.46895 * 60.00530 * 7 6 5 34 34 H 1.08994 * 109.47525 * 300.00678 * 7 6 5 35 35 H 0.97006 * 120.00112 * 0.02562 * 10 8 7 36 36 H 1.08998 * 113.61566 * 334.57062 * 13 11 10 37 37 H 1.08999 * 113.61259 * 203.66272 * 13 11 10 38 38 H 1.08994 * 109.47014 * 327.50167 * 16 14 13 39 39 H 1.08995 * 109.47162 * 207.50285 * 16 14 13 40 40 H 1.08002 * 126.91567 * 0.04325 * 18 17 16 41 41 H 1.07994 * 126.74727 * 180.21281 * 19 18 17 42 42 H 1.08999 * 113.61451 * 156.33734 * 22 11 10 43 43 H 1.08999 * 113.69867 * 25.44522 * 22 11 10 44 44 H 1.08991 * 109.46970 * 45.00197 * 24 23 5 45 45 H 0.96699 * 113.99899 * 300.00635 * 25 24 23 46 46 H 1.48499 * 109.99999 * 179.97438 * 26 24 23 47 47 H 1.48503 * 110.00214 * 301.31725 * 26 24 23 48 48 H 1.08000 * 119.94223 * 179.97438 * 27 23 5 49 49 H 1.08005 * 119.96781 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 3.4301 1.2842 -0.0058 5 6 4.0566 2.5211 -0.0014 6 8 5.4135 2.5962 -0.0029 7 6 6.1316 1.3607 -0.0027 8 6 7.6124 1.6403 -0.0039 9 8 8.0133 2.7849 -0.0043 10 7 8.4912 0.6185 -0.0044 11 6 9.9308 0.8903 -0.0049 12 1 10.1760 1.8720 -0.4102 13 6 10.6152 0.5879 1.3386 14 6 10.8311 -0.8425 0.8169 15 1 10.0071 -1.5196 1.0415 16 6 12.1971 -1.4279 1.1808 17 7 12.1187 -2.0701 2.4952 18 6 12.4560 -3.3506 2.7734 19 6 12.2347 -3.5196 4.0980 20 7 11.7740 -2.3511 4.5583 21 7 11.7146 -1.5139 3.5834 22 6 10.7727 -0.2500 -0.6010 23 6 3.2969 3.6823 -0.0015 24 6 3.9773 5.0270 -0.0021 25 8 4.5039 5.2949 1.2990 26 14 2.7435 6.3468 -0.4566 27 6 1.9171 3.6065 -0.0006 28 6 1.2905 2.3752 -0.0001 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 4.0197 0.3793 -0.0099 33 1 5.8690 0.7877 -0.8921 34 1 5.8708 0.7890 0.8878 35 1 8.1705 -0.2970 -0.0044 36 1 9.9419 0.6438 2.1939 37 1 11.5416 1.1416 1.4910 38 1 12.9384 -0.6294 1.2102 39 1 12.4872 -2.1656 0.4327 40 1 12.8309 -4.0881 2.0791 41 1 12.3976 -4.4207 4.6705 42 1 11.7423 0.0745 -0.9788 43 1 10.2280 -0.8715 -1.3117 44 1 4.7894 5.0229 -0.7290 45 1 3.8355 5.3135 1.9976 46 1 3.4019 7.6779 -0.4601 47 1 2.1649 6.0623 -1.7944 48 1 1.3275 4.5114 -0.0002 49 1 0.2119 2.3188 0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567714_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:13 Heat of formation + Delta-G solvation = 23.730995 kcal Electronic energy + Delta-G solvation = -33416.157646 eV Core-core repulsion = 28735.598492 eV Total energy + Delta-G solvation = -4680.559154 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -44.15623 -41.91667 -41.33788 -40.21375 -39.43868 -38.27660 -36.94160 -35.81505 -34.30039 -32.30910 -31.93018 -31.48545 -30.10654 -28.92793 -28.34654 -26.77022 -26.13349 -24.93605 -23.75662 -23.49281 -22.52452 -22.34394 -21.99915 -20.47965 -19.95663 -18.81270 -18.44364 -18.06425 -17.89132 -17.60433 -17.30286 -17.19573 -16.90207 -16.69423 -16.52870 -16.05320 -15.92869 -15.86478 -15.58622 -15.26843 -15.21944 -15.14401 -14.99388 -14.58096 -14.47526 -13.96300 -13.87071 -13.55636 -13.47128 -13.34712 -13.18502 -13.09718 -12.65711 -12.52268 -12.35857 -12.27944 -12.03555 -11.92679 -11.88624 -11.75643 -11.65011 -11.32242 -11.13476 -10.99202 -10.37343 -10.31432 -10.24116 -9.72887 -9.12526 -5.04598 0.18400 0.27659 0.70524 1.30298 1.31299 1.36588 1.52608 1.63603 1.63969 1.97328 2.22629 2.50308 2.55513 3.27569 3.40357 3.43352 3.57736 3.58370 3.63339 3.71305 3.74146 3.80533 3.87654 3.96264 4.04495 4.06213 4.13828 4.15320 4.31924 4.32591 4.35934 4.36996 4.38025 4.42547 4.44456 4.59132 4.61311 4.71662 4.78274 4.78928 4.83995 4.93464 4.99988 5.01359 5.07193 5.21108 5.25663 5.28309 5.43826 5.48063 5.73408 6.08193 6.31137 6.37188 6.84144 7.01709 7.56196 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.163 3.837 4 C -0.255 4.255 5 C 0.172 3.828 6 O -0.305 6.305 7 C 0.036 3.964 8 C 0.516 3.484 9 O -0.567 6.567 10 N -0.693 5.693 11 C 0.108 3.892 12 H 0.085 0.915 13 C -0.145 4.145 14 C -0.112 4.112 15 H 0.096 0.904 16 C 0.114 3.886 17 N -0.285 5.285 18 C -0.034 4.034 19 C -0.074 4.074 20 N -0.325 5.325 21 N -0.122 5.122 22 C -0.108 4.108 23 C -0.203 4.203 24 C -0.070 4.070 25 O -0.559 6.559 26 Si 0.796 3.204 27 C -0.031 4.031 28 C -0.236 4.236 29 H 0.115 0.885 30 H 0.071 0.929 31 H 0.069 0.931 32 H 0.150 0.850 33 H 0.124 0.876 34 H 0.117 0.883 35 H 0.419 0.581 36 H 0.048 0.952 37 H 0.095 0.905 38 H 0.109 0.891 39 H 0.151 0.849 40 H 0.236 0.764 41 H 0.209 0.791 42 H 0.122 0.878 43 H 0.100 0.900 44 H 0.080 0.920 45 H 0.391 0.609 46 H -0.304 1.304 47 H -0.278 1.278 48 H 0.168 0.832 49 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.739 -9.284 -5.398 11.371 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.117 3.883 4 C -0.274 4.274 5 C 0.126 3.874 6 O -0.217 6.217 7 C -0.042 4.042 8 C 0.302 3.698 9 O -0.444 6.444 10 N -0.347 5.347 11 C 0.003 3.997 12 H 0.103 0.897 13 C -0.184 4.184 14 C -0.131 4.131 15 H 0.114 0.886 16 C -0.005 4.005 17 N -0.080 5.080 18 C -0.186 4.186 19 C -0.232 4.232 20 N -0.190 5.190 21 N -0.101 5.101 22 C -0.147 4.147 23 C -0.204 4.204 24 C -0.178 4.178 25 O -0.366 6.366 26 Si 0.700 3.300 27 C -0.048 4.048 28 C -0.255 4.255 29 H 0.134 0.866 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.168 0.832 33 H 0.142 0.858 34 H 0.135 0.865 35 H 0.257 0.743 36 H 0.067 0.933 37 H 0.113 0.887 38 H 0.127 0.873 39 H 0.169 0.831 40 H 0.252 0.748 41 H 0.225 0.775 42 H 0.141 0.859 43 H 0.119 0.881 44 H 0.098 0.902 45 H 0.240 0.760 46 H -0.232 1.232 47 H -0.205 1.205 48 H 0.185 0.815 49 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -3.438 -6.543 -5.662 9.311 hybrid contribution 0.837 -1.696 -0.357 1.925 sum -2.601 -8.240 -6.019 10.531 Atomic orbital electron populations 1.23415 0.75899 1.05714 1.02813 1.86056 1.23863 1.26580 1.87937 1.18875 0.91553 0.85129 0.92721 1.20539 0.93594 0.97273 1.15975 1.18645 0.81634 0.93383 0.93773 1.86220 1.15735 1.31572 1.88214 1.22711 0.88482 0.86559 1.06482 1.20461 0.88522 0.85216 0.75629 1.90776 1.80690 1.23245 1.49738 1.45345 1.05484 1.09329 1.74559 1.21938 0.79272 1.00696 0.97786 0.89706 1.23485 1.01284 0.96785 0.96824 1.22815 0.96547 0.95930 0.97840 0.88614 1.22632 0.99308 1.00651 0.77923 1.47876 1.40249 1.09569 1.10274 1.24430 1.06506 0.88482 0.99178 1.24230 1.05494 0.98833 0.94616 1.75105 1.18385 1.02168 1.23384 1.78293 1.19803 1.22653 0.89365 1.23266 1.01595 0.95037 0.94764 1.19759 0.93875 0.93981 1.12784 1.25174 1.04461 0.99770 0.88426 1.86546 1.39325 1.93713 1.17030 0.94084 0.80351 0.72977 0.82543 1.20874 0.91459 0.98673 0.93811 1.21457 1.01832 0.91113 1.11092 0.86637 0.91061 0.91235 0.83196 0.85826 0.86528 0.74345 0.93288 0.88669 0.87297 0.83134 0.74761 0.77452 0.85940 0.88117 0.90214 0.76030 1.23221 1.20466 0.81536 0.82005 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.36 10.50 -92.50 -0.97 -1.33 16 3 C 0.16 0.35 6.68 22.49 0.15 0.50 16 4 C -0.25 -0.86 8.97 22.46 0.20 -0.66 16 5 C 0.17 1.22 6.66 22.49 0.15 1.37 16 6 O -0.31 -3.19 8.99 -73.33 -0.66 -3.85 16 7 C 0.04 0.06 5.22 71.24 0.37 0.43 16 8 C 0.52 3.30 7.91 87.66 0.69 3.99 16 9 O -0.57 -10.35 16.10 16.02 0.26 -10.09 16 10 N -0.69 1.31 5.26 -440.06 -2.32 -1.00 16 11 C 0.11 -0.20 4.32 45.51 0.20 0.00 16 12 H 0.08 0.31 7.46 -2.39 -0.02 0.29 16 13 C -0.15 0.10 7.43 31.12 0.23 0.34 16 14 C -0.11 0.88 3.63 -10.27 -0.04 0.85 16 15 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 16 C 0.11 -1.08 6.29 86.38 0.54 -0.54 16 17 N -0.29 0.24 3.44 -347.73 -1.20 -0.95 16 18 C -0.03 0.14 11.57 83.49 0.97 1.11 16 19 C -0.07 -0.16 12.05 83.73 1.01 0.85 16 20 N -0.33 -3.73 12.41 -58.25 -0.72 -4.45 16 21 N -0.12 -1.10 12.93 37.02 0.48 -0.62 16 22 C -0.11 1.17 7.39 31.12 0.23 1.39 16 23 C -0.20 -1.05 5.27 -19.75 -0.10 -1.16 16 24 C -0.07 -0.50 2.37 71.24 0.17 -0.33 16 25 O -0.56 -5.10 12.88 -148.98 -1.92 -7.02 16 26 Si 0.80 0.97 29.91 68.60 2.05 3.02 16 27 C -0.03 0.02 8.65 22.24 0.19 0.22 16 28 C -0.24 0.32 9.03 22.38 0.20 0.52 16 29 H 0.12 -1.07 8.14 -2.39 -0.02 -1.09 16 30 H 0.07 -0.61 7.66 -2.39 -0.02 -0.63 16 31 H 0.07 -0.59 7.66 -2.39 -0.02 -0.60 16 32 H 0.15 -0.11 6.30 -2.91 -0.02 -0.13 16 33 H 0.12 -0.60 7.65 -2.39 -0.02 -0.61 16 34 H 0.12 -0.36 7.67 -2.39 -0.02 -0.38 16 35 H 0.42 -3.80 8.70 -92.70 -0.81 -4.60 16 36 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 37 H 0.09 -0.07 7.90 -2.39 -0.02 -0.09 16 38 H 0.11 -1.09 7.84 -2.39 -0.02 -1.11 16 39 H 0.15 -2.64 8.07 -2.39 -0.02 -2.65 16 40 H 0.24 -3.43 8.06 -2.91 -0.02 -3.45 16 41 H 0.21 -0.80 8.06 -2.91 -0.02 -0.82 16 42 H 0.12 -1.69 8.10 -2.39 -0.02 -1.71 16 43 H 0.10 -1.36 8.14 -2.39 -0.02 -1.38 16 44 H 0.08 1.03 7.82 -2.39 -0.02 1.01 16 45 H 0.39 -0.34 8.70 -74.06 -0.64 -0.99 16 46 H -0.30 -2.84 7.11 99.48 0.71 -2.13 16 47 H -0.28 -1.28 7.11 99.48 0.71 -0.57 16 48 H 0.17 -1.25 5.12 -2.91 -0.01 -1.26 16 49 H 0.16 -1.16 6.29 -2.91 -0.02 -1.18 16 Total: 0.00 -41.82 411.54 0.88 -40.93 By element: Atomic # 1 Polarization: -24.11 SS G_CDS: -0.40 Total: -24.51 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: 6.28 Total: 9.88 kcal Atomic # 7 Polarization: -3.27 SS G_CDS: -3.76 Total: -7.03 kcal Atomic # 8 Polarization: -19.00 SS G_CDS: -3.29 Total: -22.29 kcal Atomic # 14 Polarization: 0.97 SS G_CDS: 2.05 Total: 3.02 kcal Total: -41.82 0.88 -40.93 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.663 kcal (2) G-P(sol) polarization free energy of solvation -41.816 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.932 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds