Wall clock time and date at job start Sun Mar 7 2021 07:05:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 C 1.46898 * 111.00001 * 2 1 4 4 C 1.50702 * 109.47011 * 293.95332 * 3 2 1 5 5 O 1.21274 * 120.00041 * 0.02562 * 4 3 2 6 6 N 1.34782 * 119.99615 * 179.97438 * 4 3 2 7 7 C 1.46498 * 119.99742 * 179.97438 * 6 4 3 8 8 H 1.09007 * 112.90582 * 23.75067 * 7 6 4 9 9 C 1.53781 * 113.61619 * 155.00062 * 7 6 4 10 10 C 1.53777 * 87.07928 * 89.11573 * 9 7 6 11 11 H 1.08998 * 113.62045 * 270.80566 * 10 9 7 12 12 C 1.52998 * 113.61515 * 139.98224 * 10 9 7 13 13 N 1.46496 * 109.47444 * 175.00255 * 12 10 9 14 14 C 1.35313 * 125.86774 * 125.00133 * 13 12 10 15 15 C 1.35355 * 106.17637 * 180.02562 * 14 13 12 16 16 N 1.33770 * 106.49598 * 0.02562 * 15 14 13 17 17 N 1.28636 * 108.88653 * 359.97438 * 16 15 14 18 18 C 1.53780 * 113.61886 * 252.50216 * 7 6 4 19 19 C 1.39671 * 110.99811 * 123.95397 * 2 1 3 20 20 C 1.38890 * 120.07461 * 115.77084 * 19 2 1 21 21 C 1.50701 * 120.04020 * 0.02562 * 20 19 2 22 22 O 1.42901 * 109.47211 * 285.00528 * 21 20 19 23 23 Si 1.86293 * 109.47441 * 164.99939 * 21 20 19 24 24 C 1.38128 * 119.92490 * 179.78776 * 20 19 2 25 25 C 1.38261 * 120.07401 * 0.49032 * 24 20 19 26 26 C 1.50703 * 119.92592 * 179.76739 * 25 24 20 27 27 F 1.39896 * 109.47064 * 179.97438 * 26 25 24 28 28 F 1.39901 * 109.46903 * 299.97188 * 26 25 24 29 29 F 1.39898 * 109.47220 * 59.97289 * 26 25 24 30 30 C 1.38308 * 120.15245 * 359.73989 * 25 24 20 31 31 C 1.38086 * 120.07031 * 0.02562 * 30 25 24 32 32 H 1.08999 * 109.47457 * 60.00159 * 1 2 3 33 33 H 1.09003 * 109.47483 * 179.97438 * 1 2 3 34 34 H 1.08995 * 109.47189 * 299.99936 * 1 2 3 35 35 H 1.09004 * 109.47059 * 173.95380 * 3 2 1 36 36 H 1.09004 * 109.46864 * 53.95528 * 3 2 1 37 37 H 0.96999 * 120.00090 * 0.02562 * 6 4 3 38 38 H 1.09004 * 113.61118 * 334.57130 * 9 7 6 39 39 H 1.08992 * 113.62029 * 203.66744 * 9 7 6 40 40 H 1.08999 * 109.47047 * 55.00176 * 12 10 9 41 41 H 1.09008 * 109.46978 * 295.00473 * 12 10 9 42 42 H 1.07998 * 126.91382 * 359.97438 * 14 13 12 43 43 H 1.08000 * 126.75432 * 179.73657 * 15 14 13 44 44 H 1.08993 * 113.61531 * 156.33371 * 18 7 6 45 45 H 1.09001 * 113.61081 * 25.42615 * 18 7 6 46 46 H 1.09004 * 109.47030 * 44.99568 * 21 20 19 47 47 H 0.96698 * 114.00258 * 179.97438 * 22 21 20 48 48 H 1.48500 * 110.00297 * 298.68050 * 23 21 20 49 49 H 1.48498 * 110.00207 * 60.00304 * 23 21 20 50 50 H 1.07995 * 119.96309 * 180.22691 * 24 20 19 51 51 H 1.07991 * 119.96671 * 180.02562 * 30 25 24 52 52 H 1.08004 * 120.03336 * 179.97438 * 31 30 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6369 2.0471 -1.2985 5 8 1.0047 1.4456 -2.1407 6 7 2.0180 3.3202 -1.5233 7 6 1.6700 3.9769 -2.7858 8 1 0.7979 3.5348 -3.2676 9 6 1.6074 5.5102 -2.6859 10 6 3.1052 5.5154 -3.0344 11 1 3.7566 5.4488 -2.1630 12 6 3.5076 6.6383 -3.9925 13 7 4.9619 6.6326 -4.1683 14 6 5.6175 6.5577 -5.3497 15 6 6.9374 6.5821 -5.0507 16 7 7.0236 6.6689 -3.7186 17 7 5.8358 6.6970 -3.2254 18 6 2.8671 4.1659 -3.7324 19 6 1.9695 -0.7283 1.0816 20 6 2.7067 -1.8845 0.8608 21 6 2.9685 -2.3549 -0.5468 22 8 1.7783 -2.9350 -1.0843 23 14 4.3285 -3.6280 -0.5333 24 6 3.2040 -2.5999 1.9326 25 6 2.9599 -2.1719 3.2244 26 6 3.4995 -2.9580 4.3915 27 9 3.1265 -2.3337 5.5866 28 9 2.9780 -4.2558 4.3607 29 9 4.8950 -3.0141 4.3106 30 6 2.2220 -1.0237 3.4481 31 6 1.7261 -0.3010 2.3810 32 1 -0.3634 0.5138 -0.8900 33 1 -0.3634 -1.0277 -0.0005 34 1 -0.3633 0.5138 0.8899 35 1 3.0797 1.3444 0.1082 36 1 1.5611 1.9273 0.8310 37 1 2.5233 3.8014 -0.8495 38 1 1.3917 5.8738 -1.6812 39 1 0.9801 5.9722 -3.4480 40 1 3.1952 7.5975 -3.5797 41 1 3.0244 6.4833 -4.9573 42 1 5.1764 6.4911 -6.3332 43 1 7.7593 6.5354 -5.7497 44 1 2.5841 4.2604 -4.7807 45 1 3.6683 3.4443 -3.5725 46 1 3.2699 -1.5077 -1.1629 47 1 1.8734 -3.2600 -1.9900 48 1 5.5806 -3.0283 -0.0062 49 1 3.9298 -4.7883 0.3033 50 1 3.7804 -3.4970 1.7615 51 1 2.0335 -0.6919 4.4583 52 1 1.1497 0.5953 2.5564 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567714_6406254.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:27 Heat of formation + Delta-G solvation = -29.613715 kcal Electronic energy + Delta-G solvation = -41515.113462 eV Core-core repulsion = 35684.742416 eV Total energy + Delta-G solvation = -5830.371046 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.167 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -51.40095 -48.90850 -48.87979 -44.14465 -41.84735 -41.12767 -39.66580 -37.65400 -37.56715 -35.73089 -34.12985 -33.24901 -32.24991 -31.92989 -30.06268 -28.88478 -27.70947 -27.03424 -26.73071 -25.37760 -24.64165 -23.62243 -23.38007 -22.32858 -22.14690 -21.62117 -20.20571 -19.72952 -19.69308 -19.42899 -18.74478 -18.42035 -18.34560 -17.70336 -17.44501 -17.18137 -17.00056 -16.41885 -16.20516 -16.12325 -15.87115 -15.80140 -15.77902 -15.62640 -15.40329 -15.30233 -15.18072 -15.05486 -15.02337 -14.91806 -14.82591 -14.72294 -14.64400 -14.10909 -14.09201 -13.98392 -13.85959 -13.50524 -13.44495 -13.12409 -12.93579 -12.81181 -12.70838 -12.61213 -12.29791 -12.27776 -12.06068 -11.85355 -11.67128 -11.46766 -10.94292 -10.84174 -10.38810 -10.30431 -10.28818 -10.17993 -10.07459 -9.62335 -5.04962 -0.49176 -0.14735 0.71290 1.23275 1.40055 1.53100 1.54200 1.57055 1.64456 1.85625 1.87964 2.03414 2.45427 2.67352 2.76300 3.15262 3.34998 3.36814 3.42152 3.43385 3.54546 3.63753 3.71018 3.79622 3.80668 3.86780 4.01530 4.04595 4.05656 4.11598 4.17482 4.22581 4.31318 4.36231 4.37707 4.41942 4.43868 4.45581 4.55994 4.68567 4.75855 4.77897 4.80526 4.82511 4.86041 4.98906 4.99385 5.05905 5.08044 5.19420 5.26494 5.29859 5.57854 5.63948 5.74310 6.06184 6.50113 6.90556 7.22753 7.55997 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 N -0.494 5.494 3 C 0.034 3.966 4 C 0.520 3.480 5 O -0.553 6.553 6 N -0.707 5.707 7 C 0.117 3.883 8 H 0.093 0.907 9 C -0.116 4.116 10 C -0.120 4.120 11 H 0.090 0.910 12 C 0.114 3.886 13 N -0.282 5.282 14 C -0.036 4.036 15 C -0.074 4.074 16 N -0.322 5.322 17 N -0.124 5.124 18 C -0.146 4.146 19 C 0.144 3.856 20 C -0.068 4.068 21 C -0.053 4.053 22 O -0.553 6.553 23 Si 0.749 3.251 24 C -0.084 4.084 25 C -0.190 4.190 26 C 0.508 3.492 27 F -0.171 7.171 28 F -0.183 7.183 29 F -0.182 7.182 30 C -0.052 4.052 31 C -0.140 4.140 32 H 0.083 0.917 33 H 0.062 0.938 34 H 0.044 0.956 35 H 0.117 0.883 36 H 0.099 0.901 37 H 0.413 0.587 38 H 0.088 0.912 39 H 0.123 0.877 40 H 0.114 0.886 41 H 0.143 0.857 42 H 0.233 0.767 43 H 0.208 0.792 44 H 0.109 0.891 45 H 0.048 0.952 46 H 0.086 0.914 47 H 0.399 0.601 48 H -0.286 1.286 49 H -0.289 1.289 50 H 0.124 0.876 51 H 0.164 0.836 52 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.544 6.514 -6.482 10.251 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 N -0.215 5.215 3 C -0.095 4.095 4 C 0.306 3.694 5 O -0.430 6.430 6 N -0.359 5.359 7 C 0.011 3.989 8 H 0.111 0.889 9 C -0.154 4.154 10 C -0.139 4.139 11 H 0.108 0.892 12 C -0.005 4.005 13 N -0.077 5.077 14 C -0.187 4.187 15 C -0.232 4.232 16 N -0.187 5.187 17 N -0.103 5.103 18 C -0.184 4.184 19 C 0.050 3.950 20 C -0.069 4.069 21 C -0.164 4.164 22 O -0.361 6.361 23 Si 0.655 3.345 24 C -0.103 4.103 25 C -0.191 4.191 26 C 0.454 3.546 27 F -0.152 7.152 28 F -0.164 7.164 29 F -0.164 7.164 30 C -0.071 4.071 31 C -0.160 4.160 32 H 0.101 0.899 33 H 0.081 0.919 34 H 0.063 0.937 35 H 0.135 0.865 36 H 0.117 0.883 37 H 0.249 0.751 38 H 0.107 0.893 39 H 0.141 0.859 40 H 0.132 0.868 41 H 0.161 0.839 42 H 0.249 0.751 43 H 0.224 0.776 44 H 0.128 0.872 45 H 0.067 0.933 46 H 0.104 0.896 47 H 0.249 0.751 48 H -0.212 1.212 49 H -0.216 1.216 50 H 0.141 0.859 51 H 0.181 0.819 52 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -4.313 5.665 -4.904 8.645 hybrid contribution 0.085 0.320 0.513 0.611 sum -4.227 5.985 -4.391 8.543 Atomic orbital electron populations 1.22496 0.83882 1.02723 1.02073 1.59081 1.09929 1.12536 1.39943 1.22188 1.03208 0.88359 0.95721 1.20596 0.78521 0.81597 0.88691 1.90705 1.40358 1.64518 1.47465 1.45603 1.57536 1.13194 1.19589 1.21803 0.98080 0.94119 0.84910 0.88906 1.23295 0.93961 0.93459 1.04727 1.22875 0.98394 0.93933 0.98725 0.89218 1.22640 0.71418 1.02050 1.04376 1.47828 1.10085 1.44835 1.04908 1.24379 0.92982 1.07500 0.93872 1.24200 0.98380 1.07630 0.92942 1.75081 1.14596 1.18143 1.10921 1.78185 0.93248 1.21557 1.17317 1.23564 0.98100 0.96339 1.00418 1.18854 0.93746 0.92960 0.89449 1.19460 0.98198 0.94998 0.94232 1.24455 0.95974 1.03998 0.91939 1.86424 1.33699 1.80588 1.35436 0.94393 0.74422 0.77313 0.88385 1.20719 0.98871 0.98951 0.91717 1.19946 1.07064 1.00186 0.91948 1.18353 0.75510 0.77773 0.82955 1.93180 1.91138 1.82088 1.48803 1.93223 1.86558 1.40000 1.96644 1.93218 1.30404 1.96368 1.96382 1.21191 0.92803 0.91287 1.01796 1.22010 1.00733 1.01815 0.91432 0.89879 0.91941 0.93709 0.86533 0.88314 0.75082 0.89339 0.85866 0.86834 0.83947 0.75097 0.77555 0.87247 0.93302 0.89622 0.75076 1.21240 1.21620 0.85861 0.81887 0.81648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 8.94 127.69 1.14 1.18 16 2 N -0.49 -0.36 3.71 -724.44 -2.69 -3.05 16 3 C 0.03 -0.15 5.03 85.56 0.43 0.28 16 4 C 0.52 -0.49 7.55 87.66 0.66 0.17 16 5 O -0.55 -4.07 13.91 -3.01 -0.04 -4.11 16 6 N -0.71 4.39 5.26 -440.03 -2.32 2.07 16 7 C 0.12 -0.80 4.32 45.52 0.20 -0.60 16 8 H 0.09 -0.28 7.47 -2.38 -0.02 -0.30 16 9 C -0.12 1.45 7.39 31.12 0.23 1.68 16 10 C -0.12 1.14 3.71 -10.27 -0.04 1.10 16 11 H 0.09 -0.46 7.91 -2.39 -0.02 -0.48 16 12 C 0.11 -1.22 6.29 86.38 0.54 -0.68 16 13 N -0.28 0.54 3.44 -347.74 -1.20 -0.65 16 14 C -0.04 0.16 11.57 83.49 0.97 1.12 16 15 C -0.07 -0.12 12.05 83.73 1.01 0.89 16 16 N -0.32 -3.24 12.41 -58.25 -0.72 -3.96 16 17 N -0.12 -0.89 12.76 37.02 0.47 -0.42 16 18 C -0.15 1.05 7.43 31.12 0.23 1.28 16 19 C 0.14 0.23 4.65 38.21 0.18 0.40 16 20 C -0.07 -0.32 5.31 -19.73 -0.10 -0.43 16 21 C -0.05 -0.11 2.33 71.24 0.17 0.05 16 22 O -0.55 -1.48 12.86 -148.98 -1.92 -3.40 16 23 Si 0.75 0.65 30.19 68.60 2.07 2.72 16 24 C -0.08 -0.54 8.20 22.25 0.18 -0.36 16 25 C -0.19 -0.88 5.37 -19.84 -0.11 -0.99 16 26 C 0.51 3.24 3.31 71.24 0.24 3.48 16 27 F -0.17 -0.84 15.96 44.97 0.72 -0.12 16 28 F -0.18 -1.63 17.24 44.97 0.78 -0.86 16 29 F -0.18 -1.51 17.23 44.97 0.78 -0.73 16 30 C -0.05 0.02 9.42 22.25 0.21 0.23 16 31 C -0.14 0.32 8.70 22.40 0.19 0.52 16 32 H 0.08 0.36 5.88 -2.39 -0.01 0.35 16 33 H 0.06 0.28 8.13 -2.39 -0.02 0.26 16 34 H 0.04 -0.13 7.47 -2.39 -0.02 -0.15 16 35 H 0.12 -0.73 8.06 -2.39 -0.02 -0.74 16 36 H 0.10 -0.97 7.48 -2.38 -0.02 -0.99 16 37 H 0.41 -4.38 8.70 -92.71 -0.81 -5.19 16 38 H 0.09 -1.14 8.14 -2.38 -0.02 -1.16 16 39 H 0.12 -1.99 8.10 -2.39 -0.02 -2.01 16 40 H 0.11 -1.40 8.14 -2.39 -0.02 -1.42 16 41 H 0.14 -2.47 7.77 -2.38 -0.02 -2.48 16 42 H 0.23 -3.28 8.06 -2.91 -0.02 -3.31 16 43 H 0.21 -0.86 8.06 -2.91 -0.02 -0.88 16 44 H 0.11 -1.12 7.90 -2.39 -0.02 -1.14 16 45 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 46 H 0.09 0.09 7.78 -2.38 -0.02 0.08 16 47 H 0.40 -2.53 8.74 -74.06 -0.65 -3.17 16 48 H -0.29 -1.78 7.11 99.48 0.71 -1.08 16 49 H -0.29 -2.15 6.76 99.48 0.67 -1.48 16 50 H 0.12 0.95 4.90 -2.91 -0.01 0.93 16 51 H 0.16 -0.73 7.15 -2.92 -0.02 -0.75 16 52 H 0.17 -1.37 7.16 -2.91 -0.02 -1.39 16 Total: 0.00 -31.60 441.56 1.82 -29.78 By element: Atomic # 1 Polarization: -26.15 SS G_CDS: -0.44 Total: -26.58 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: 6.33 Total: 9.32 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -6.45 Total: -6.01 kcal Atomic # 8 Polarization: -5.55 SS G_CDS: -1.96 Total: -7.51 kcal Atomic # 9 Polarization: -3.98 SS G_CDS: 2.27 Total: -1.71 kcal Atomic # 14 Polarization: 0.65 SS G_CDS: 2.07 Total: 2.72 kcal Total: -31.60 1.82 -29.78 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_6406254.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.164 kcal (2) G-P(sol) polarization free energy of solvation -31.597 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.434 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.777 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.614 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.83 seconds