Wall clock time and date at job start Sun Mar 7 2021 07:05:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86306 * 109.47096 * 2 1 4 4 C 1.50701 * 109.46660 * 240.00656 * 2 1 3 5 5 C 1.34233 * 126.50361 * 105.02283 * 4 2 1 6 6 N 1.36837 * 109.93996 * 179.75740 * 5 4 2 7 7 C 1.46495 * 125.06438 * 180.20862 * 6 5 4 8 8 C 1.50697 * 109.47327 * 265.02270 * 7 6 5 9 9 O 1.21287 * 119.99633 * 0.02562 * 8 7 6 10 10 N 1.34772 * 120.00412 * 179.97438 * 8 7 6 11 11 C 1.46504 * 119.99973 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.84902 * 334.66450 * 11 10 8 13 13 C 1.53780 * 113.61330 * 105.86776 * 11 10 8 14 14 C 1.54047 * 86.98557 * 89.15933 * 13 11 10 15 15 H 1.08997 * 113.61296 * 270.87583 * 14 13 11 16 16 C 1.53002 * 113.69368 * 139.99092 * 14 13 11 17 17 N 1.46499 * 109.47365 * 87.46302 * 16 14 13 18 18 C 1.35311 * 125.87112 * 124.71321 * 17 16 14 19 19 C 1.35345 * 106.18070 * 179.90336 * 18 17 16 20 20 N 1.33773 * 106.49402 * 0.35402 * 19 18 17 21 21 N 1.28638 * 108.88713 * 359.77214 * 20 19 18 22 22 C 1.53774 * 87.08014 * 25.43100 * 14 13 11 23 23 C 1.37694 * 109.87197 * 0.24279 * 6 5 4 24 24 C 1.39089 * 133.51293 * 180.02562 * 23 6 5 25 25 C 1.37793 * 119.77490 * 179.97438 * 24 23 6 26 26 C 1.38788 * 120.67004 * 0.02562 * 25 24 23 27 27 C 1.36665 * 120.52467 * 359.96951 * 26 25 24 28 28 C 1.39585 * 119.76767 * 0.02660 * 27 26 25 29 29 H 0.96703 * 113.99982 * 300.00046 * 1 2 3 30 30 H 1.08991 * 109.47247 * 120.00096 * 2 1 3 31 31 H 1.48501 * 109.99990 * 300.00456 * 3 2 1 32 32 H 1.48501 * 109.99955 * 61.32200 * 3 2 1 33 33 H 1.08002 * 125.03336 * 0.02716 * 5 4 2 34 34 H 1.08997 * 109.47518 * 25.02697 * 7 6 5 35 35 H 1.08998 * 109.47133 * 145.02513 * 7 6 5 36 36 H 0.97000 * 120.00067 * 0.02562 * 10 8 7 37 37 H 1.09003 * 113.60760 * 203.66643 * 13 11 10 38 38 H 1.08995 * 113.61341 * 334.55764 * 13 11 10 39 39 H 1.09001 * 109.47257 * 207.46286 * 16 14 13 40 40 H 1.09006 * 109.47270 * 327.46078 * 16 14 13 41 41 H 1.08001 * 126.90590 * 0.02562 * 18 17 16 42 42 H 1.07997 * 126.75697 * 180.12285 * 19 18 17 43 43 H 1.08997 * 113.61376 * 220.02184 * 22 14 13 44 44 H 1.09004 * 113.69514 * 89.12721 * 22 14 13 45 45 H 1.07998 * 120.10973 * 359.97438 * 24 23 6 46 46 H 1.08001 * 119.66261 * 179.97438 * 25 24 23 47 47 H 1.07994 * 119.73455 * 180.02562 * 26 25 24 48 48 H 1.07998 * 120.11361 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2306 5 6 2.4610 -0.1375 -2.3229 6 7 2.8077 -1.0992 -3.2325 7 6 3.4181 -0.8409 -4.5389 8 6 2.3431 -0.7852 -5.5935 9 8 1.1813 -0.9450 -5.2842 10 7 2.6726 -0.5568 -6.8802 11 6 1.6273 -0.5021 -7.9054 12 1 0.7363 -1.0673 -7.6320 13 6 1.3255 0.9217 -8.4019 14 6 2.4243 0.6987 -9.4583 15 1 3.4198 0.9864 -9.1202 16 6 2.0775 1.2673 -10.8357 17 7 2.4934 2.6704 -10.9038 18 6 3.3134 3.2100 -11.8351 19 6 3.4260 4.5223 -11.5236 20 7 2.6855 4.7172 -10.4267 21 7 2.1460 3.6006 -10.0847 22 6 2.1388 -0.8062 -9.3234 23 6 2.4967 -2.3457 -2.7372 24 6 2.6349 -3.6365 -3.2367 25 6 2.2180 -4.7108 -2.4813 26 6 1.6600 -4.5190 -1.2251 27 6 1.5149 -3.2594 -0.7150 28 6 1.9305 -2.1567 -1.4630 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5138 0.8899 31 1 1.5614 2.4680 -1.2084 32 1 1.5879 2.4586 1.2243 33 1 2.5977 0.9248 -2.4614 34 1 3.9488 0.1108 -4.5103 35 1 4.1193 -1.6408 -4.7768 36 1 3.6017 -0.4286 -7.1276 37 1 0.3278 1.0336 -8.8265 38 1 1.5669 1.6978 -7.6757 39 1 2.5968 0.6967 -11.6057 40 1 1.0015 1.1991 -10.9966 41 1 3.7821 2.6971 -12.6620 42 1 4.0035 5.2651 -12.0537 43 1 3.0365 -1.4242 -9.3406 44 1 1.3634 -1.1673 -9.9991 45 1 3.0675 -3.7961 -4.2133 46 1 2.3257 -5.7123 -2.8711 47 1 1.3387 -5.3719 -0.6458 48 1 1.0802 -3.1179 0.2635 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567714_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:53 Heat of formation + Delta-G solvation = 142.971202 kcal Electronic energy + Delta-G solvation = -32258.970762 eV Core-core repulsion = 27899.068444 eV Total energy + Delta-G solvation = -4359.902318 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -44.19606 -42.45623 -41.37208 -39.64077 -37.94520 -37.56559 -35.87939 -34.42895 -33.91585 -31.97897 -31.37809 -30.15061 -29.88992 -28.75990 -27.01605 -25.83706 -24.81167 -23.64404 -23.55877 -22.74757 -22.42192 -21.81676 -20.62896 -20.40041 -18.94473 -18.46791 -18.31517 -18.08924 -17.63387 -17.38293 -17.01046 -16.44742 -16.29646 -16.06066 -15.93338 -15.70248 -15.53379 -15.31884 -15.23090 -14.83850 -14.66453 -14.59675 -14.34376 -14.15584 -13.97544 -13.76079 -13.50489 -13.41129 -13.16965 -12.74171 -12.62899 -12.52869 -12.41940 -12.36975 -12.00662 -11.95638 -11.84899 -11.56945 -11.54882 -11.10886 -11.05816 -10.38585 -10.35479 -10.27145 -10.23709 -8.98624 -8.49635 -4.90194 0.30880 0.61975 0.81826 1.28707 1.36442 1.37673 1.42264 1.65049 1.65734 1.76844 2.02686 2.07646 2.98251 3.11317 3.13292 3.29860 3.37945 3.44922 3.47938 3.58664 3.71112 3.75128 3.76193 3.81216 3.83458 3.91246 4.04651 4.09316 4.10480 4.26760 4.34013 4.35850 4.38374 4.44023 4.47912 4.56019 4.63971 4.72656 4.73569 4.82769 4.84498 4.91046 4.93627 5.02553 5.19807 5.28226 5.33403 5.56301 5.67414 5.83424 5.88791 5.92976 6.13681 6.32239 6.39639 6.65978 6.99250 7.56747 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.037 4.037 3 Si 0.677 3.323 4 C -0.151 4.151 5 C 0.072 3.928 6 N -0.466 5.466 7 C 0.093 3.907 8 C 0.493 3.507 9 O -0.508 6.508 10 N -0.713 5.713 11 C 0.120 3.880 12 H 0.107 0.893 13 C -0.137 4.137 14 C -0.125 4.125 15 H 0.098 0.902 16 C 0.123 3.877 17 N -0.291 5.291 18 C -0.054 4.054 19 C -0.051 4.051 20 N -0.273 5.273 21 N -0.079 5.079 22 C -0.133 4.133 23 C 0.109 3.891 24 C -0.127 4.127 25 C -0.097 4.097 26 C -0.146 4.146 27 C -0.065 4.065 28 C -0.085 4.085 29 H 0.375 0.625 30 H 0.072 0.928 31 H -0.255 1.255 32 H -0.260 1.260 33 H 0.169 0.831 34 H 0.124 0.876 35 H 0.119 0.881 36 H 0.402 0.598 37 H 0.096 0.904 38 H 0.079 0.921 39 H 0.109 0.891 40 H 0.103 0.897 41 H 0.190 0.810 42 H 0.190 0.810 43 H 0.081 0.919 44 H 0.103 0.897 45 H 0.115 0.885 46 H 0.125 0.875 47 H 0.123 0.877 48 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.645 -3.189 -4.943 9.646 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.147 4.147 3 Si 0.578 3.422 4 C -0.158 4.158 5 C -0.052 4.052 6 N -0.150 5.150 7 C -0.033 4.033 8 C 0.277 3.723 9 O -0.381 6.381 10 N -0.366 5.366 11 C 0.015 3.985 12 H 0.125 0.875 13 C -0.176 4.176 14 C -0.144 4.144 15 H 0.116 0.884 16 C 0.002 3.998 17 N -0.085 5.085 18 C -0.204 4.204 19 C -0.208 4.208 20 N -0.139 5.139 21 N -0.059 5.059 22 C -0.172 4.172 23 C 0.005 3.995 24 C -0.148 4.148 25 C -0.117 4.117 26 C -0.165 4.165 27 C -0.083 4.083 28 C -0.089 4.089 29 H 0.222 0.778 30 H 0.090 0.910 31 H -0.180 1.180 32 H -0.185 1.185 33 H 0.186 0.814 34 H 0.142 0.858 35 H 0.137 0.863 36 H 0.236 0.764 37 H 0.114 0.886 38 H 0.098 0.902 39 H 0.127 0.873 40 H 0.121 0.879 41 H 0.207 0.793 42 H 0.207 0.793 43 H 0.100 0.900 44 H 0.122 0.878 45 H 0.133 0.867 46 H 0.143 0.857 47 H 0.141 0.859 48 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 5.970 -2.366 -4.283 7.719 hybrid contribution -0.002 -0.340 -0.999 1.055 sum 5.968 -2.706 -5.281 8.416 Atomic orbital electron populations 1.86676 1.18269 1.79825 1.49350 1.24013 0.83891 1.09703 0.97077 0.95426 0.91470 0.74722 0.80555 1.19417 1.08294 0.91618 0.96483 1.21514 1.01167 0.93868 0.88676 1.43159 1.53821 1.04627 1.13361 1.21569 0.94397 1.06083 0.81295 1.21058 0.90890 0.76917 0.83459 1.90839 1.19716 1.46799 1.80709 1.45606 1.10416 1.73840 1.06730 1.21816 0.92052 0.97813 0.86834 0.87475 1.23513 0.98780 0.97416 0.97904 1.22986 1.01019 0.96560 0.93820 0.88373 1.22238 1.02782 0.74943 0.99865 1.47548 1.31463 1.10649 1.18816 1.23745 1.01301 0.96005 0.99386 1.23691 1.03884 0.95723 0.97546 1.75182 1.09863 1.16224 1.12652 1.78361 1.20223 0.91797 1.15523 1.23328 1.02807 0.94635 0.96419 1.18157 1.01407 0.85852 0.94124 1.19943 1.05317 0.89229 1.00276 1.20811 0.98445 0.97914 0.94490 1.20656 1.02439 0.96883 0.96506 1.20270 0.97918 0.90934 0.99214 1.18943 1.03005 0.92767 0.94211 0.77776 0.91029 1.17957 1.18470 0.81381 0.85825 0.86290 0.76390 0.88575 0.90236 0.87265 0.87872 0.79279 0.79317 0.89988 0.87844 0.86743 0.85742 0.85947 0.86089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.98 12.86 -35.23 -0.45 -2.43 16 2 C -0.04 -0.07 3.05 36.01 0.11 0.04 16 3 Si 0.68 0.12 30.79 -169.99 -5.23 -5.11 16 4 C -0.15 -0.58 5.61 -102.71 -0.58 -1.16 16 5 C 0.07 0.18 9.89 -16.73 -0.17 0.01 16 6 N -0.47 -0.98 2.27 -115.71 -0.26 -1.24 16 7 C 0.09 -0.18 6.48 -5.20 -0.03 -0.22 16 8 C 0.49 0.28 7.90 -10.99 -0.09 0.19 16 9 O -0.51 -3.11 16.04 5.55 0.09 -3.02 16 10 N -0.71 1.87 5.26 -53.01 -0.28 1.59 16 11 C 0.12 -0.25 4.30 -67.11 -0.29 -0.54 16 12 H 0.11 0.03 7.50 -51.93 -0.39 -0.36 16 13 C -0.14 0.23 7.45 -25.78 -0.19 0.04 16 14 C -0.12 0.51 3.65 -89.67 -0.33 0.18 16 15 H 0.10 -0.35 8.14 -51.93 -0.42 -0.78 16 16 C 0.12 -0.51 6.30 -4.04 -0.03 -0.53 16 17 N -0.29 0.11 3.44 -61.26 -0.21 -0.10 16 18 C -0.05 0.08 11.57 -17.05 -0.20 -0.12 16 19 C -0.05 -0.04 12.05 -17.74 -0.21 -0.25 16 20 N -0.27 -1.25 12.41 30.23 0.38 -0.87 16 21 N -0.08 -0.28 12.93 60.35 0.78 0.51 16 22 C -0.13 0.68 7.38 -25.92 -0.19 0.49 16 23 C 0.11 0.44 6.80 -83.98 -0.57 -0.13 16 24 C -0.13 -0.35 10.00 -39.43 -0.39 -0.75 16 25 C -0.10 -0.23 10.01 -39.54 -0.40 -0.63 16 26 C -0.15 -0.41 9.97 -39.95 -0.40 -0.81 16 27 C -0.06 -0.26 10.05 -39.65 -0.40 -0.66 16 28 C -0.09 -0.42 6.35 -105.14 -0.67 -1.09 16 29 H 0.37 -0.26 8.74 45.56 0.40 0.14 16 30 H 0.07 0.03 7.96 -51.93 -0.41 -0.38 16 31 H -0.25 -0.80 7.04 56.52 0.40 -0.40 16 32 H -0.26 -0.55 7.11 56.52 0.40 -0.14 16 33 H 0.17 0.00 6.30 -52.49 -0.33 -0.33 16 34 H 0.12 -0.64 8.12 -51.93 -0.42 -1.06 16 35 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 36 H 0.40 -2.29 8.70 -40.82 -0.36 -2.64 16 37 H 0.10 -0.15 7.91 -51.93 -0.41 -0.56 16 38 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 39 H 0.11 -0.75 8.07 -51.93 -0.42 -1.17 16 40 H 0.10 -0.47 7.85 -51.93 -0.41 -0.87 16 41 H 0.19 -1.04 8.06 -52.49 -0.42 -1.47 16 42 H 0.19 -0.40 8.06 -52.49 -0.42 -0.82 16 43 H 0.08 -0.48 8.14 -51.93 -0.42 -0.90 16 44 H 0.10 -0.62 8.10 -51.93 -0.42 -1.04 16 45 H 0.11 0.07 8.06 -52.49 -0.42 -0.35 16 46 H 0.12 0.01 8.06 -52.49 -0.42 -0.42 16 47 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 48 H 0.12 0.33 8.06 -52.49 -0.42 -0.09 16 LS Contribution 409.13 15.07 6.17 6.17 Total: 0.00 -15.14 409.13 -10.64 -25.78 By element: Atomic # 1 Polarization: -8.72 SS G_CDS: -6.60 Total: -15.32 kcal Atomic # 6 Polarization: -0.93 SS G_CDS: -5.01 Total: -5.95 kcal Atomic # 7 Polarization: -0.52 SS G_CDS: 0.40 Total: -0.11 kcal Atomic # 8 Polarization: -5.09 SS G_CDS: -0.36 Total: -5.45 kcal Atomic # 14 Polarization: 0.12 SS G_CDS: -5.23 Total: -5.11 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -15.14 -10.64 -25.78 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 168.752 kcal (2) G-P(sol) polarization free energy of solvation -15.138 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 153.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.642 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.781 kcal (6) G-S(sol) free energy of system = (1) + (5) 142.971 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds