Wall clock time and date at job start Sun Mar 7 2021 07:05:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86306 * 109.47096 * 2 1 4 4 C 1.50701 * 109.46660 * 240.00656 * 2 1 3 5 5 C 1.34233 * 126.50361 * 105.02283 * 4 2 1 6 6 N 1.36837 * 109.93996 * 179.75740 * 5 4 2 7 7 C 1.46495 * 125.06438 * 180.20862 * 6 5 4 8 8 C 1.50697 * 109.47327 * 265.02270 * 7 6 5 9 9 O 1.21287 * 119.99633 * 0.02562 * 8 7 6 10 10 N 1.34772 * 120.00412 * 179.97438 * 8 7 6 11 11 C 1.46504 * 119.99973 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.84902 * 334.66450 * 11 10 8 13 13 C 1.53780 * 113.61330 * 105.86776 * 11 10 8 14 14 C 1.54047 * 86.98557 * 89.15933 * 13 11 10 15 15 H 1.08997 * 113.61296 * 270.87583 * 14 13 11 16 16 C 1.53002 * 113.69368 * 139.99092 * 14 13 11 17 17 N 1.46499 * 109.47365 * 87.46302 * 16 14 13 18 18 C 1.35311 * 125.87112 * 124.71321 * 17 16 14 19 19 C 1.35345 * 106.18070 * 179.90336 * 18 17 16 20 20 N 1.33773 * 106.49402 * 0.35402 * 19 18 17 21 21 N 1.28638 * 108.88713 * 359.77214 * 20 19 18 22 22 C 1.53774 * 87.08014 * 25.43100 * 14 13 11 23 23 C 1.37694 * 109.87197 * 0.24279 * 6 5 4 24 24 C 1.39089 * 133.51293 * 180.02562 * 23 6 5 25 25 C 1.37793 * 119.77490 * 179.97438 * 24 23 6 26 26 C 1.38788 * 120.67004 * 0.02562 * 25 24 23 27 27 C 1.36665 * 120.52467 * 359.96951 * 26 25 24 28 28 C 1.39585 * 119.76767 * 0.02660 * 27 26 25 29 29 H 0.96703 * 113.99982 * 300.00046 * 1 2 3 30 30 H 1.08991 * 109.47247 * 120.00096 * 2 1 3 31 31 H 1.48501 * 109.99990 * 300.00456 * 3 2 1 32 32 H 1.48501 * 109.99955 * 61.32200 * 3 2 1 33 33 H 1.08002 * 125.03336 * 0.02716 * 5 4 2 34 34 H 1.08997 * 109.47518 * 25.02697 * 7 6 5 35 35 H 1.08998 * 109.47133 * 145.02513 * 7 6 5 36 36 H 0.97000 * 120.00067 * 0.02562 * 10 8 7 37 37 H 1.09003 * 113.60760 * 203.66643 * 13 11 10 38 38 H 1.08995 * 113.61341 * 334.55764 * 13 11 10 39 39 H 1.09001 * 109.47257 * 207.46286 * 16 14 13 40 40 H 1.09006 * 109.47270 * 327.46078 * 16 14 13 41 41 H 1.08001 * 126.90590 * 0.02562 * 18 17 16 42 42 H 1.07997 * 126.75697 * 180.12285 * 19 18 17 43 43 H 1.08997 * 113.61376 * 220.02184 * 22 14 13 44 44 H 1.09004 * 113.69514 * 89.12721 * 22 14 13 45 45 H 1.07998 * 120.10973 * 359.97438 * 24 23 6 46 46 H 1.08001 * 119.66261 * 179.97438 * 25 24 23 47 47 H 1.07994 * 119.73455 * 180.02562 * 26 25 24 48 48 H 1.07998 * 120.11361 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2306 5 6 2.4610 -0.1375 -2.3229 6 7 2.8077 -1.0992 -3.2325 7 6 3.4181 -0.8409 -4.5389 8 6 2.3431 -0.7852 -5.5935 9 8 1.1813 -0.9450 -5.2842 10 7 2.6726 -0.5568 -6.8802 11 6 1.6273 -0.5021 -7.9054 12 1 0.7363 -1.0673 -7.6320 13 6 1.3255 0.9217 -8.4019 14 6 2.4243 0.6987 -9.4583 15 1 3.4198 0.9864 -9.1202 16 6 2.0775 1.2673 -10.8357 17 7 2.4934 2.6704 -10.9038 18 6 3.3134 3.2100 -11.8351 19 6 3.4260 4.5223 -11.5236 20 7 2.6855 4.7172 -10.4267 21 7 2.1460 3.6006 -10.0847 22 6 2.1388 -0.8062 -9.3234 23 6 2.4967 -2.3457 -2.7372 24 6 2.6349 -3.6365 -3.2367 25 6 2.2180 -4.7108 -2.4813 26 6 1.6600 -4.5190 -1.2251 27 6 1.5149 -3.2594 -0.7150 28 6 1.9305 -2.1567 -1.4630 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5138 0.8899 31 1 1.5614 2.4680 -1.2084 32 1 1.5879 2.4586 1.2243 33 1 2.5977 0.9248 -2.4614 34 1 3.9488 0.1108 -4.5103 35 1 4.1193 -1.6408 -4.7768 36 1 3.6017 -0.4286 -7.1276 37 1 0.3278 1.0336 -8.8265 38 1 1.5669 1.6978 -7.6757 39 1 2.5968 0.6967 -11.6057 40 1 1.0015 1.1991 -10.9966 41 1 3.7821 2.6971 -12.6620 42 1 4.0035 5.2651 -12.0537 43 1 3.0365 -1.4242 -9.3406 44 1 1.3634 -1.1673 -9.9991 45 1 3.0675 -3.7961 -4.2133 46 1 2.3257 -5.7123 -2.8711 47 1 1.3387 -5.3719 -0.6458 48 1 1.0802 -3.1179 0.2635 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567714_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:52 Heat of formation + Delta-G solvation = 137.742009 kcal Electronic energy + Delta-G solvation = -32259.197517 eV Core-core repulsion = 27899.068444 eV Total energy + Delta-G solvation = -4360.129073 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -44.16023 -42.56081 -41.29085 -39.61050 -38.10867 -37.73024 -35.80565 -34.46932 -33.94986 -31.93389 -31.47804 -30.30599 -29.80348 -28.74522 -26.77722 -25.91318 -24.73058 -23.77173 -23.51745 -22.83953 -22.33104 -21.83746 -20.58466 -20.42174 -18.85565 -18.53374 -18.33682 -18.15412 -17.72619 -17.30966 -16.89661 -16.47907 -16.39321 -15.95056 -15.91911 -15.79546 -15.37300 -15.27098 -15.14784 -14.93460 -14.78343 -14.71902 -14.42747 -14.15188 -13.94686 -13.55439 -13.53982 -13.32413 -13.04762 -12.75750 -12.66319 -12.58359 -12.53386 -12.36247 -12.13157 -11.92843 -11.76341 -11.73265 -11.31717 -11.22073 -10.99819 -10.56643 -10.37647 -10.31813 -10.19987 -9.17317 -8.65463 -4.94741 0.12460 0.62953 0.70088 1.28748 1.35728 1.37745 1.51966 1.57988 1.63646 1.69035 1.94957 2.12410 2.92789 3.27170 3.41251 3.52630 3.52898 3.57809 3.62438 3.68737 3.73623 3.77916 3.82424 3.99999 4.03823 4.09729 4.15111 4.22255 4.26632 4.32024 4.35804 4.37113 4.38280 4.56531 4.61589 4.69251 4.70745 4.77244 4.78827 4.83969 4.89351 4.93840 5.00540 5.08649 5.13069 5.28097 5.48667 5.50409 5.65144 5.72136 5.72992 5.74014 6.13944 6.22229 6.41230 6.65481 7.08150 7.55748 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.055 4.055 3 Si 0.778 3.222 4 C -0.180 4.180 5 C 0.070 3.930 6 N -0.467 5.467 7 C 0.088 3.912 8 C 0.491 3.509 9 O -0.574 6.574 10 N -0.694 5.694 11 C 0.110 3.890 12 H 0.078 0.922 13 C -0.145 4.145 14 C -0.110 4.110 15 H 0.099 0.901 16 C 0.113 3.887 17 N -0.285 5.285 18 C -0.034 4.034 19 C -0.074 4.074 20 N -0.325 5.325 21 N -0.122 5.122 22 C -0.109 4.109 23 C 0.091 3.909 24 C -0.133 4.133 25 C -0.105 4.105 26 C -0.153 4.153 27 C -0.087 4.087 28 C -0.118 4.118 29 H 0.390 0.610 30 H 0.082 0.918 31 H -0.296 1.296 32 H -0.283 1.283 33 H 0.188 0.812 34 H 0.160 0.840 35 H 0.152 0.848 36 H 0.420 0.580 37 H 0.089 0.911 38 H 0.048 0.952 39 H 0.151 0.849 40 H 0.106 0.894 41 H 0.236 0.764 42 H 0.209 0.791 43 H 0.103 0.897 44 H 0.118 0.882 45 H 0.136 0.864 46 H 0.149 0.851 47 H 0.139 0.861 48 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.123 -4.343 -7.347 13.241 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.163 4.163 3 Si 0.682 3.318 4 C -0.187 4.187 5 C -0.056 4.056 6 N -0.149 5.149 7 C -0.036 4.036 8 C 0.277 3.723 9 O -0.452 6.452 10 N -0.347 5.347 11 C 0.004 3.996 12 H 0.096 0.904 13 C -0.184 4.184 14 C -0.129 4.129 15 H 0.117 0.883 16 C -0.006 4.006 17 N -0.080 5.080 18 C -0.185 4.185 19 C -0.232 4.232 20 N -0.190 5.190 21 N -0.102 5.102 22 C -0.147 4.147 23 C -0.014 4.014 24 C -0.154 4.154 25 C -0.124 4.124 26 C -0.171 4.171 27 C -0.105 4.105 28 C -0.122 4.122 29 H 0.239 0.761 30 H 0.100 0.900 31 H -0.223 1.223 32 H -0.210 1.210 33 H 0.205 0.795 34 H 0.177 0.823 35 H 0.170 0.830 36 H 0.258 0.742 37 H 0.107 0.893 38 H 0.067 0.933 39 H 0.169 0.831 40 H 0.124 0.876 41 H 0.252 0.748 42 H 0.225 0.775 43 H 0.121 0.879 44 H 0.136 0.864 45 H 0.154 0.846 46 H 0.166 0.834 47 H 0.157 0.843 48 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 8.487 -3.542 -6.696 11.376 hybrid contribution -0.813 -0.005 -0.337 0.880 sum 7.674 -3.547 -7.033 10.997 Atomic orbital electron populations 1.86626 1.19582 1.80583 1.50606 1.24430 0.83125 1.11733 0.97040 0.94302 0.89744 0.71018 0.76771 1.19760 1.09503 0.91635 0.97802 1.21881 1.00409 0.94808 0.88484 1.43380 1.53286 1.03855 1.14397 1.21992 0.93687 1.09242 0.78684 1.21545 0.90471 0.75732 0.84589 1.90819 1.22404 1.50161 1.81785 1.45476 1.11340 1.72137 1.05792 1.21864 0.91786 0.97253 0.88678 0.90382 1.23506 0.99669 0.96678 0.98564 1.22849 0.99713 0.97216 0.93117 0.88326 1.22632 1.03737 0.73456 1.00766 1.47872 1.30693 1.11275 1.18126 1.24424 0.99560 0.95272 0.99280 1.24225 1.04134 0.97661 0.97131 1.75104 1.11620 1.17509 1.14794 1.78292 1.21935 0.92512 1.17422 1.23244 1.03824 0.93973 0.93647 1.18443 1.01753 0.87000 0.94213 1.20266 1.05086 0.88863 1.01138 1.21160 0.97955 0.99054 0.94271 1.20939 1.02172 0.96960 0.97076 1.20452 0.98883 0.91585 0.99620 1.19356 1.03941 0.93635 0.95296 0.76067 0.90001 1.22330 1.20972 0.79481 0.82272 0.83050 0.74200 0.89280 0.93298 0.83125 0.87579 0.74763 0.77466 0.87898 0.86384 0.84649 0.83375 0.84282 0.86077 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -5.45 12.86 -148.98 -1.92 -7.37 16 2 C -0.06 -0.32 3.05 71.24 0.22 -0.10 16 3 Si 0.78 0.82 30.79 68.60 2.11 2.93 16 4 C -0.18 -1.72 5.61 -18.63 -0.10 -1.83 16 5 C 0.07 0.42 9.89 83.00 0.82 1.24 16 6 N -0.47 -2.22 2.27 -520.01 -1.18 -3.40 16 7 C 0.09 -0.42 6.48 85.63 0.56 0.13 16 8 C 0.49 0.81 7.90 87.66 0.69 1.51 16 9 O -0.57 -8.38 16.04 -3.05 -0.05 -8.43 16 10 N -0.69 3.83 5.26 -440.03 -2.32 1.52 16 11 C 0.11 -0.41 4.30 45.52 0.20 -0.21 16 12 H 0.08 0.21 7.50 -2.39 -0.02 0.19 16 13 C -0.15 0.29 7.45 31.21 0.23 0.52 16 14 C -0.11 1.03 3.65 -10.18 -0.04 0.99 16 15 H 0.10 -0.88 8.14 -2.39 -0.02 -0.90 16 16 C 0.11 -1.18 6.30 86.38 0.54 -0.63 16 17 N -0.29 0.51 3.44 -347.73 -1.20 -0.68 16 18 C -0.03 0.17 11.57 83.49 0.97 1.14 16 19 C -0.07 -0.10 12.05 83.73 1.01 0.91 16 20 N -0.33 -3.42 12.41 -58.26 -0.72 -4.14 16 21 N -0.12 -0.99 12.93 37.02 0.48 -0.51 16 22 C -0.11 1.33 7.38 31.12 0.23 1.56 16 23 C 0.09 0.83 6.80 39.03 0.27 1.10 16 24 C -0.13 -0.78 10.00 22.37 0.22 -0.55 16 25 C -0.11 -0.52 10.01 22.30 0.22 -0.30 16 26 C -0.15 -1.03 9.97 22.03 0.22 -0.81 16 27 C -0.09 -0.89 10.05 22.23 0.22 -0.67 16 28 C -0.12 -1.43 6.35 -20.20 -0.13 -1.55 16 29 H 0.39 0.21 8.74 -74.06 -0.65 -0.44 16 30 H 0.08 0.21 7.96 -2.39 -0.02 0.19 16 31 H -0.30 -2.28 7.04 99.48 0.70 -1.58 16 32 H -0.28 -1.32 7.11 99.48 0.71 -0.61 16 33 H 0.19 0.13 6.30 -2.91 -0.02 0.11 16 34 H 0.16 -1.95 8.12 -2.39 -0.02 -1.97 16 35 H 0.15 -1.73 8.14 -2.39 -0.02 -1.75 16 36 H 0.42 -5.50 8.70 -92.71 -0.81 -6.30 16 37 H 0.09 -0.09 7.91 -2.39 -0.02 -0.11 16 38 H 0.05 0.21 8.14 -2.39 -0.02 0.19 16 39 H 0.15 -2.77 8.07 -2.39 -0.02 -2.78 16 40 H 0.11 -1.11 7.85 -2.38 -0.02 -1.13 16 41 H 0.24 -3.63 8.06 -2.91 -0.02 -3.65 16 42 H 0.21 -0.97 8.06 -2.91 -0.02 -0.99 16 43 H 0.10 -1.59 8.14 -2.39 -0.02 -1.60 16 44 H 0.12 -1.71 8.10 -2.38 -0.02 -1.73 16 45 H 0.14 0.05 8.06 -2.91 -0.02 0.03 16 46 H 0.15 -0.11 8.06 -2.91 -0.02 -0.13 16 47 H 0.14 0.29 8.06 -2.91 -0.02 0.27 16 48 H 0.12 1.01 8.06 -2.91 -0.02 0.99 16 Total: 0.00 -42.48 409.13 1.14 -41.34 By element: Atomic # 1 Polarization: -23.29 SS G_CDS: -0.42 Total: -23.70 kcal Atomic # 6 Polarization: -3.91 SS G_CDS: 6.35 Total: 2.44 kcal Atomic # 7 Polarization: -2.27 SS G_CDS: -4.94 Total: -7.21 kcal Atomic # 8 Polarization: -13.83 SS G_CDS: -1.96 Total: -15.80 kcal Atomic # 14 Polarization: 0.82 SS G_CDS: 2.11 Total: 2.93 kcal Total: -42.48 1.14 -41.34 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.082 kcal (2) G-P(sol) polarization free energy of solvation -42.483 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 136.598 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.340 kcal (6) G-S(sol) free energy of system = (1) + (5) 137.742 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds