Wall clock time and date at job start Sun Mar 7 2021 07:24:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47109 * 2 1 4 4 C 1.50695 * 109.47029 * 120.00179 * 2 1 3 5 5 C 1.38273 * 119.94361 * 65.00352 * 4 2 1 6 6 C 1.38145 * 120.05465 * 180.02562 * 5 4 2 7 7 C 1.38734 * 119.94552 * 359.97438 * 6 5 4 8 8 O 1.35897 * 120.05665 * 180.02562 * 7 6 5 9 9 C 1.42899 * 116.99793 * 179.97438 * 8 7 6 10 10 C 1.50702 * 109.46876 * 179.97438 * 9 8 7 11 11 O 1.21283 * 120.00262 * 0.02562 * 10 9 8 12 12 N 1.34777 * 119.99928 * 179.72354 * 10 9 8 13 13 C 1.46499 * 120.00199 * 180.27479 * 12 10 9 14 14 C 1.52997 * 109.47555 * 180.02562 * 13 12 10 15 15 H 1.09000 * 112.84729 * 43.80692 * 14 13 12 16 16 C 1.53782 * 113.61653 * 174.99994 * 14 13 12 17 17 C 1.53780 * 87.07872 * 139.98291 * 16 14 13 18 18 H 1.09011 * 113.61353 * 89.11949 * 17 16 14 19 19 N 1.46499 * 113.61584 * 219.93121 * 17 16 14 20 20 C 1.35318 * 125.86463 * 85.00468 * 19 17 16 21 21 C 1.35348 * 106.17319 * 180.02562 * 20 19 17 22 22 N 1.33765 * 106.50187 * 359.97438 * 21 20 19 23 23 N 1.28636 * 108.88301 * 359.73419 * 22 21 20 24 24 C 1.53774 * 87.08411 * 334.56798 * 17 16 14 25 25 C 1.38733 * 119.88395 * 0.27895 * 7 6 5 26 26 C 1.38147 * 119.94799 * 359.42093 * 25 7 6 27 27 H 0.96695 * 113.99887 * 300.00089 * 1 2 3 28 28 H 1.09004 * 109.46831 * 240.00080 * 2 1 3 29 29 H 1.48497 * 109.99707 * 178.67972 * 3 2 1 30 30 H 1.48497 * 110.00012 * 299.99943 * 3 2 1 31 31 H 1.07994 * 119.97341 * 359.97099 * 5 4 2 32 32 H 1.07993 * 120.03046 * 180.02562 * 6 5 4 33 33 H 1.09004 * 109.47206 * 60.00256 * 9 8 7 34 34 H 1.08994 * 109.47548 * 299.99913 * 9 8 7 35 35 H 0.97000 * 120.00317 * 0.28382 * 12 10 9 36 36 H 1.08998 * 109.47134 * 300.00670 * 13 12 10 37 37 H 1.09002 * 109.46857 * 59.99862 * 13 12 10 38 38 H 1.08997 * 113.61383 * 254.53330 * 16 14 13 39 39 H 1.08997 * 113.61199 * 25.35148 * 16 14 13 40 40 H 1.08000 * 126.91146 * 0.02562 * 20 19 17 41 41 H 1.08007 * 126.74713 * 180.02562 * 21 20 19 42 42 H 1.08998 * 113.61544 * 270.88323 * 24 17 16 43 43 H 1.09004 * 113.61702 * 139.97454 * 24 17 16 44 44 H 1.08009 * 120.02352 * 179.72687 * 25 7 6 45 45 H 1.07996 * 119.97029 * 180.32168 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6840 -2.0606 1.3971 6 6 2.1430 -2.7141 2.5244 7 6 2.8530 -2.0146 3.4894 8 8 3.3059 -2.6552 4.5990 9 6 4.0299 -1.8721 5.5501 10 6 4.4486 -2.7452 6.7049 11 8 4.1563 -3.9222 6.7125 12 7 5.1532 -2.2193 7.7264 13 6 5.5654 -3.0693 8.8462 14 6 6.3448 -2.2320 9.8622 15 1 5.8820 -1.2647 10.0574 16 6 6.7201 -3.0040 11.1382 17 6 8.0781 -2.2849 11.0794 18 1 8.0905 -1.3313 11.6074 19 7 9.2124 -3.1435 11.4292 20 6 9.8730 -3.9680 10.5837 21 6 10.8399 -4.5656 11.3185 22 7 10.7255 -4.0834 12.5610 23 7 9.7558 -3.2388 12.5922 24 6 7.8512 -2.1475 9.5647 25 6 3.0952 -0.6588 3.3223 26 6 2.6395 -0.0113 2.1903 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 3.5346 1.7702 0.0322 30 1 1.5615 2.4679 -1.2085 31 1 1.1309 -2.6046 0.6458 32 1 1.9499 -3.7687 2.6540 33 1 3.3940 -1.0661 5.9164 34 1 4.9147 -1.4493 5.0744 35 1 5.3873 -1.2780 7.7204 36 1 4.6826 -3.4924 9.3254 37 1 6.1994 -3.8752 8.4763 38 1 6.1191 -2.7318 12.0058 39 1 6.7886 -4.0820 10.9920 40 1 9.6696 -4.1189 9.5339 41 1 11.5623 -5.2889 10.9700 42 1 8.2304 -2.9912 8.9881 43 1 8.1633 -1.1838 9.1620 44 1 3.6439 -0.1111 4.0743 45 1 2.8323 1.0430 2.0573 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567720_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:24:41 Heat of formation + Delta-G solvation = 62.992027 kcal Electronic energy + Delta-G solvation = -28119.503880 eV Core-core repulsion = 23914.867023 eV Total energy + Delta-G solvation = -4204.636857 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -44.25567 -41.67689 -41.05232 -40.23752 -39.02184 -37.18473 -36.03127 -34.15906 -32.51099 -32.00508 -31.84644 -30.70796 -28.57591 -27.38955 -26.30067 -25.35678 -24.02809 -23.63319 -22.52355 -22.40826 -21.85053 -20.83032 -19.60076 -19.20581 -18.37382 -18.06273 -17.68424 -17.47123 -17.32774 -16.89353 -16.69535 -16.32872 -16.14488 -15.97769 -15.81243 -15.64969 -15.29916 -14.95796 -14.72936 -14.67720 -14.31213 -14.02230 -13.90407 -13.82030 -13.69191 -13.57426 -13.41586 -12.95783 -12.65825 -12.29659 -12.24440 -12.18184 -12.10945 -12.09058 -11.81884 -11.74555 -11.09743 -10.99801 -10.46334 -10.40951 -10.34942 -10.11847 -9.29696 -5.10571 0.21754 0.22601 0.59901 1.21416 1.24578 1.32550 1.34397 1.57020 1.66611 1.92533 2.37189 2.58836 2.69114 2.83355 3.08989 3.17814 3.33858 3.44062 3.49556 3.58639 3.65129 3.66412 3.74998 3.78457 3.80302 3.83319 3.98795 4.07257 4.16258 4.19165 4.26092 4.29339 4.36210 4.37483 4.44318 4.46037 4.50982 4.57798 4.70967 4.81304 4.87937 5.05296 5.08403 5.17093 5.20775 5.44015 5.58624 5.60184 6.06483 6.23649 6.54268 6.91522 7.57218 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.684 3.316 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.133 3.867 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.515 3.485 11 O -0.510 6.510 12 N -0.728 5.728 13 C 0.133 3.867 14 C -0.118 4.118 15 H 0.112 0.888 16 C -0.132 4.132 17 C 0.116 3.884 18 H 0.137 0.863 19 N -0.282 5.282 20 C -0.052 4.052 21 C -0.049 4.049 22 N -0.271 5.271 23 N -0.085 5.085 24 C -0.139 4.139 25 C -0.206 4.206 26 C -0.074 4.074 27 H 0.379 0.621 28 H 0.113 0.887 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.134 0.866 32 H 0.136 0.864 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.403 0.597 36 H 0.078 0.922 37 H 0.075 0.925 38 H 0.093 0.907 39 H 0.098 0.902 40 H 0.189 0.811 41 H 0.191 0.809 42 H 0.100 0.900 43 H 0.092 0.908 44 H 0.132 0.868 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.126 6.479 -0.989 6.650 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.175 4.175 3 Si 0.587 3.413 4 C -0.157 4.157 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.039 4.039 10 C 0.300 3.700 11 O -0.383 6.383 12 N -0.383 5.383 13 C 0.010 3.990 14 C -0.137 4.137 15 H 0.130 0.870 16 C -0.171 4.171 17 C 0.014 3.986 18 H 0.155 0.845 19 N -0.076 5.076 20 C -0.203 4.203 21 C -0.206 4.206 22 N -0.137 5.137 23 N -0.064 5.064 24 C -0.178 4.178 25 C -0.225 4.225 26 C -0.092 4.092 27 H 0.226 0.774 28 H 0.130 0.870 29 H -0.183 1.183 30 H -0.180 1.180 31 H 0.152 0.848 32 H 0.154 0.846 33 H 0.114 0.886 34 H 0.113 0.887 35 H 0.238 0.762 36 H 0.096 0.904 37 H 0.093 0.907 38 H 0.112 0.888 39 H 0.116 0.884 40 H 0.206 0.794 41 H 0.208 0.792 42 H 0.119 0.881 43 H 0.111 0.889 44 H 0.150 0.850 45 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.817 6.167 -0.427 6.235 hybrid contribution 0.365 -0.241 -1.282 1.355 sum -0.453 5.926 -1.709 6.184 Atomic orbital electron populations 1.86511 1.17152 1.81694 1.49231 1.24983 0.85205 1.09884 0.97395 0.94887 0.80913 0.78161 0.87372 1.20261 1.02466 0.95191 0.97813 1.20873 0.96325 0.93472 0.96197 1.20542 1.01173 1.01103 0.93535 1.19066 0.94416 0.90999 0.86719 1.86174 1.68517 1.36589 1.28788 1.22459 0.97944 0.94014 0.89443 1.20048 0.78437 0.88492 0.83046 1.90809 1.53265 1.16213 1.78057 1.45766 1.57199 1.13728 1.21593 1.21343 0.99377 0.92769 0.85530 1.22629 0.94738 1.00777 0.95596 0.86999 1.23422 0.94071 1.01090 0.98530 1.23369 0.82491 0.94588 0.98171 0.84495 1.47503 1.23643 1.28990 1.07425 1.23588 0.98174 0.98688 0.99806 1.23691 1.01930 1.04635 0.90389 1.75167 1.11202 1.07293 1.20016 1.78350 1.06649 1.17011 1.04421 1.23606 0.95891 1.04871 0.93385 1.21166 1.06960 0.93617 1.00757 1.20766 0.96426 0.99011 0.92986 0.77400 0.86994 1.18336 1.17958 0.84773 0.84618 0.88592 0.88692 0.76208 0.90385 0.90705 0.88805 0.88371 0.79441 0.79222 0.88133 0.88945 0.85041 0.85267 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.08 12.83 -35.23 -0.45 -0.37 16 2 C -0.06 0.05 2.80 36.00 0.10 0.15 16 3 Si 0.68 -1.18 29.80 -169.99 -5.07 -6.25 16 4 C -0.16 0.07 5.35 -104.60 -0.56 -0.49 16 5 C -0.05 -0.02 9.68 -39.60 -0.38 -0.40 16 6 C -0.14 -0.14 9.99 -39.43 -0.39 -0.53 16 7 C 0.13 0.09 6.69 -39.22 -0.26 -0.17 16 8 O -0.29 -0.44 9.67 -39.33 -0.38 -0.82 16 9 C 0.04 -0.11 5.22 36.01 0.19 0.08 16 10 C 0.52 -0.36 7.91 -10.98 -0.09 -0.44 16 11 O -0.51 -2.41 16.50 -14.35 -0.24 -2.65 16 12 N -0.73 3.31 5.56 -60.29 -0.33 2.97 16 13 C 0.13 -0.57 5.51 -4.04 -0.02 -0.59 16 14 C -0.12 0.77 3.75 -89.81 -0.34 0.44 16 15 H 0.11 -0.89 8.14 -51.93 -0.42 -1.32 16 16 C -0.13 0.62 7.44 -25.92 -0.19 0.43 16 17 C 0.12 -0.45 4.96 -67.12 -0.33 -0.78 16 18 H 0.14 -0.64 8.14 -51.92 -0.42 -1.06 16 19 N -0.28 0.00 3.53 -53.97 -0.19 -0.19 16 20 C -0.05 0.05 10.78 -17.05 -0.18 -0.13 16 21 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 22 N -0.27 -1.34 12.41 30.23 0.38 -0.96 16 23 N -0.09 -0.35 13.17 60.35 0.79 0.45 16 24 C -0.14 0.88 6.98 -25.92 -0.18 0.70 16 25 C -0.21 0.31 9.04 -39.43 -0.36 -0.05 16 26 C -0.07 0.11 8.66 -39.61 -0.34 -0.23 16 27 H 0.38 -1.52 8.70 45.56 0.40 -1.13 16 28 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 29 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 30 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 31 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 32 H 0.14 0.08 8.06 -52.49 -0.42 -0.34 16 33 H 0.10 -0.52 7.65 -51.93 -0.40 -0.91 16 34 H 0.10 -0.50 7.67 -51.93 -0.40 -0.90 16 35 H 0.40 -3.19 8.47 -40.82 -0.35 -3.53 16 36 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.07 -0.24 7.85 -51.93 -0.41 -0.65 16 38 H 0.09 -0.45 8.14 -51.93 -0.42 -0.88 16 39 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 40 H 0.19 -0.90 6.74 -52.49 -0.35 -1.25 16 41 H 0.19 -0.34 8.06 -52.48 -0.42 -0.76 16 42 H 0.10 -0.63 6.09 -51.93 -0.32 -0.94 16 43 H 0.09 -0.67 8.14 -51.93 -0.42 -1.09 16 44 H 0.13 -0.59 6.30 -52.48 -0.33 -0.92 16 45 H 0.13 -0.48 4.90 -52.49 -0.26 -0.74 16 LS Contribution 379.80 15.07 5.72 5.72 Total: 0.00 -13.78 379.80 -9.15 -22.93 By element: Atomic # 1 Polarization: -12.72 SS G_CDS: -5.82 Total: -18.54 kcal Atomic # 6 Polarization: 1.26 SS G_CDS: -3.56 Total: -2.30 kcal Atomic # 7 Polarization: 1.62 SS G_CDS: 0.64 Total: 2.26 kcal Atomic # 8 Polarization: -2.77 SS G_CDS: -1.07 Total: -3.84 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.07 Total: -6.25 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -13.78 -9.15 -22.93 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.926 kcal (2) G-P(sol) polarization free energy of solvation -13.782 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.152 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.934 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds