Wall clock time and date at job start Sun Mar 7 2021 07:24:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86306 * 109.47049 * 2 1 4 4 C 1.50703 * 109.46912 * 240.00408 * 2 1 3 5 5 C 1.38243 * 119.97323 * 120.00129 * 4 2 1 6 6 C 1.38289 * 120.11362 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05159 * 359.97438 * 6 5 4 8 8 C 1.38747 * 119.94590 * 359.97438 * 7 6 5 9 9 O 1.35898 * 120.05546 * 179.97438 * 8 7 6 10 10 C 1.42904 * 116.99940 * 0.02562 * 9 8 7 11 11 C 1.53002 * 109.47009 * 179.97438 * 10 9 8 12 12 C 1.50701 * 109.47115 * 179.97438 * 11 10 9 13 13 O 1.21291 * 119.99773 * 0.02562 * 12 11 10 14 14 N 1.34773 * 120.00357 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00143 * 180.02562 * 14 12 11 16 16 C 1.53002 * 109.46901 * 179.97438 * 15 14 12 17 17 H 1.09000 * 112.84847 * 316.19433 * 16 15 14 18 18 C 1.53780 * 113.61604 * 87.50144 * 16 15 14 19 19 C 1.53777 * 87.08308 * 139.97737 * 18 16 15 20 20 H 1.08998 * 113.68901 * 89.12551 * 19 18 16 21 21 N 1.46499 * 113.61712 * 220.01879 * 19 18 16 22 22 C 1.35313 * 125.86691 * 12.21444 * 21 19 18 23 23 C 1.35353 * 106.17428 * 179.90096 * 22 21 19 24 24 N 1.33773 * 106.49767 * 0.35825 * 23 22 21 25 25 N 1.28640 * 108.88534 * 359.76686 * 24 23 22 26 26 C 1.53781 * 113.61343 * 184.99926 * 16 15 14 27 27 C 1.38163 * 119.97235 * 299.99554 * 4 2 1 28 28 H 0.96702 * 113.99834 * 59.99558 * 1 2 3 29 29 H 1.08991 * 109.47104 * 120.00507 * 2 1 3 30 30 H 1.48496 * 109.99558 * 60.00217 * 3 2 1 31 31 H 1.48494 * 109.99818 * 181.31720 * 3 2 1 32 32 H 1.08004 * 119.94085 * 0.02562 * 5 4 2 33 33 H 1.07993 * 119.96940 * 180.27537 * 6 5 4 34 34 H 1.08000 * 120.02369 * 180.02562 * 7 6 5 35 35 H 1.08999 * 109.47040 * 299.99833 * 10 9 8 36 36 H 1.08995 * 109.47340 * 59.99861 * 10 9 8 37 37 H 1.08999 * 109.47276 * 299.99925 * 11 10 9 38 38 H 1.08998 * 109.47492 * 59.99955 * 11 10 9 39 39 H 0.97004 * 119.99823 * 359.97438 * 14 12 11 40 40 H 1.08999 * 109.47012 * 299.99956 * 15 14 12 41 41 H 1.08995 * 109.47476 * 60.00051 * 15 14 12 42 42 H 1.08995 * 113.61553 * 254.53173 * 18 16 15 43 43 H 1.09007 * 113.61163 * 25.43295 * 18 16 15 44 44 H 1.07996 * 126.91148 * 0.02562 * 22 21 19 45 45 H 1.08003 * 126.75004 * 180.12133 * 23 22 21 46 46 H 1.09001 * 113.61370 * 334.56287 * 26 16 15 47 47 H 1.08996 * 113.61785 * 105.38424 * 26 16 15 48 48 H 1.08000 * 120.02728 * 0.03006 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2306 5 6 2.7261 -0.0379 -2.1401 6 6 3.1891 -0.6871 -3.2700 7 6 2.8586 -2.0097 -3.4921 8 6 2.0620 -2.6871 -2.5802 9 8 1.7351 -3.9883 -2.7967 10 6 2.2469 -4.5968 -3.9841 11 6 1.7774 -6.0513 -4.0548 12 6 2.3166 -6.6929 -5.3073 13 8 3.0088 -6.0502 -6.0682 14 7 2.0307 -7.9811 -5.5814 15 6 2.5553 -8.6049 -6.7987 16 6 2.0868 -10.0598 -6.8688 17 1 2.1716 -10.5782 -5.9138 18 6 0.7177 -10.2340 -7.5470 19 6 1.2985 -11.4890 -8.2197 20 1 1.1670 -12.3996 -7.6353 21 7 0.8918 -11.6468 -9.6182 22 6 0.2851 -10.7060 -10.3784 23 6 0.0941 -11.2694 -11.5942 24 7 0.5796 -12.5135 -11.5169 25 7 1.0451 -12.7060 -10.3333 26 6 2.6837 -10.8429 -8.0500 27 6 1.5973 -2.0331 -1.4487 28 1 -0.3933 0.4418 -0.7650 29 1 1.7924 -0.5139 0.8899 30 1 1.5616 2.4678 1.2085 31 1 3.5346 1.7703 -0.0321 32 1 2.9866 0.9959 -1.9676 33 1 3.8134 -0.1609 -3.9768 34 1 3.2208 -2.5164 -4.3745 35 1 1.8827 -4.0543 -4.8565 36 1 3.3363 -4.5675 -3.9668 37 1 2.1420 -6.5936 -3.1824 38 1 0.6880 -6.0811 -4.0719 39 1 1.4781 -8.4955 -4.9723 40 1 2.1904 -8.0628 -7.6710 41 1 3.6447 -8.5749 -6.7818 42 1 -0.0915 -10.4477 -6.8487 43 1 0.4732 -9.4362 -8.2485 44 1 0.0106 -9.7062 -10.0765 45 1 -0.3640 -10.8068 -12.4560 46 1 2.9766 -10.2116 -8.8890 47 1 3.4626 -11.5471 -7.7580 48 1 0.9761 -2.5579 -0.7380 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567720_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:24:49 Heat of formation + Delta-G solvation = 53.222331 kcal Electronic energy + Delta-G solvation = -29775.063055 eV Core-core repulsion = 25414.464934 eV Total energy + Delta-G solvation = -4360.598122 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -44.25172 -41.48611 -41.11926 -40.30994 -39.11131 -37.27521 -36.05088 -34.17155 -33.41888 -32.45293 -32.00105 -30.96743 -29.42888 -27.38962 -27.03118 -25.92133 -24.69947 -23.66604 -23.62680 -22.43532 -22.14406 -21.60979 -20.77508 -19.41778 -18.99550 -18.11094 -17.75502 -17.64054 -17.47370 -17.28340 -17.11890 -16.84578 -16.59285 -16.35844 -16.11040 -15.93126 -15.40740 -15.34657 -14.99662 -14.92323 -14.70704 -14.40399 -14.16353 -14.02061 -13.98477 -13.85292 -13.49049 -13.25628 -13.04085 -12.89859 -12.86025 -12.64998 -12.40347 -12.22272 -12.08579 -11.93575 -11.86953 -11.74521 -11.62543 -11.16333 -11.01146 -10.51138 -10.37350 -10.34669 -9.90670 -9.24980 -5.03881 0.21665 0.40879 0.60318 1.25510 1.27182 1.38417 1.57305 1.63145 1.66840 1.95876 2.32724 2.68246 2.70356 2.84788 3.11457 3.19252 3.40273 3.44489 3.49980 3.61432 3.65391 3.72726 3.79099 3.84438 3.87315 3.99227 4.03822 4.08237 4.16813 4.19484 4.22683 4.27328 4.29673 4.30920 4.38235 4.46924 4.48510 4.49176 4.52922 4.56691 4.66834 4.71864 4.82673 4.97564 5.11392 5.21022 5.26379 5.37933 5.44472 5.58975 5.67963 6.15320 6.35397 6.55240 6.93176 7.57508 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.693 3.307 4 C -0.082 4.082 5 C -0.155 4.155 6 C -0.073 4.073 7 C -0.203 4.203 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.074 3.926 11 C -0.141 4.141 12 C 0.520 3.480 13 O -0.537 6.537 14 N -0.729 5.729 15 C 0.131 3.869 16 C -0.119 4.119 17 H 0.111 0.889 18 C -0.139 4.139 19 C 0.115 3.885 20 H 0.137 0.863 21 N -0.282 5.282 22 C -0.052 4.052 23 C -0.049 4.049 24 N -0.271 5.271 25 N -0.085 5.085 26 C -0.132 4.132 27 C -0.125 4.125 28 H 0.380 0.620 29 H 0.115 0.885 30 H -0.255 1.255 31 H -0.258 1.258 32 H 0.128 0.872 33 H 0.131 0.869 34 H 0.132 0.868 35 H 0.073 0.927 36 H 0.072 0.928 37 H 0.108 0.892 38 H 0.108 0.892 39 H 0.404 0.596 40 H 0.074 0.926 41 H 0.076 0.924 42 H 0.092 0.908 43 H 0.100 0.900 44 H 0.189 0.811 45 H 0.191 0.809 46 H 0.097 0.903 47 H 0.093 0.907 48 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.755 2.373 1.823 3.469 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.595 3.405 4 C -0.083 4.083 5 C -0.173 4.173 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.181 4.181 12 C 0.307 3.693 13 O -0.413 6.413 14 N -0.382 5.382 15 C 0.007 3.993 16 C -0.138 4.138 17 H 0.129 0.871 18 C -0.177 4.177 19 C 0.014 3.986 20 H 0.155 0.845 21 N -0.075 5.075 22 C -0.203 4.203 23 C -0.206 4.206 24 N -0.137 5.137 25 N -0.064 5.064 26 C -0.171 4.171 27 C -0.144 4.144 28 H 0.227 0.773 29 H 0.133 0.867 30 H -0.180 1.180 31 H -0.183 1.183 32 H 0.146 0.854 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.239 0.761 40 H 0.092 0.908 41 H 0.094 0.906 42 H 0.111 0.889 43 H 0.119 0.881 44 H 0.206 0.794 45 H 0.208 0.792 46 H 0.116 0.884 47 H 0.112 0.888 48 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.263 1.510 2.319 2.780 hybrid contribution -0.435 0.184 0.296 0.557 sum -0.697 1.694 2.615 3.193 Atomic orbital electron populations 1.86510 1.16949 1.81712 1.49256 1.25105 0.85349 1.10228 0.97314 0.94597 0.81000 0.77865 0.87072 1.20133 0.97603 0.93930 0.96593 1.20939 1.00964 0.99839 0.95557 1.20933 0.97749 0.93743 0.96669 1.21389 1.03159 0.96502 1.01077 1.18950 0.94696 0.83144 0.94522 1.85974 1.71195 1.22790 1.43061 1.22409 0.99348 0.92044 0.86343 1.21465 1.03952 0.95484 0.97236 1.20311 0.80215 0.81747 0.87072 1.90773 1.37884 1.62606 1.50040 1.45920 1.54398 1.12267 1.25589 1.21332 0.99698 0.90803 0.87425 1.22631 0.95911 0.95833 0.99405 0.87062 1.23599 0.98166 0.96061 0.99885 1.23375 0.97588 1.01059 0.76605 0.84505 1.47506 1.38448 1.09552 1.12033 1.23586 1.05134 0.98700 0.92843 1.23691 1.05690 0.92583 0.98680 1.75170 1.12183 1.16310 1.10042 1.78354 1.19819 1.09442 0.98823 1.23421 0.95857 0.99302 0.98539 1.20234 1.03118 0.93976 0.97081 0.77303 0.86745 1.17971 1.18282 0.85432 0.85142 0.84993 0.90876 0.90950 0.87401 0.87374 0.76102 0.90817 0.90551 0.88939 0.88149 0.79445 0.79217 0.88420 0.88843 0.84817 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.17 12.77 -35.23 -0.45 -0.61 16 2 C -0.07 0.01 2.82 36.01 0.10 0.11 16 3 Si 0.69 -0.74 29.79 -169.99 -5.06 -5.80 16 4 C -0.08 -0.05 5.39 -104.65 -0.56 -0.61 16 5 C -0.16 0.02 8.67 -39.56 -0.34 -0.32 16 6 C -0.07 0.00 10.04 -39.60 -0.40 -0.39 16 7 C -0.20 -0.16 9.04 -39.43 -0.36 -0.51 16 8 C 0.13 0.22 6.69 -39.22 -0.26 -0.04 16 9 O -0.32 -0.38 10.14 -19.42 -0.20 -0.57 16 10 C 0.07 -0.05 4.03 37.16 0.15 0.10 16 11 C -0.14 0.44 6.07 -27.88 -0.17 0.27 16 12 C 0.52 -0.75 7.83 -10.99 -0.09 -0.83 16 13 O -0.54 -1.52 15.98 5.55 0.09 -1.43 16 14 N -0.73 3.15 5.56 -60.29 -0.33 2.82 16 15 C 0.13 -0.54 5.51 -4.04 -0.02 -0.57 16 16 C -0.12 0.73 3.75 -89.81 -0.34 0.40 16 17 H 0.11 -0.82 8.14 -51.93 -0.42 -1.25 16 18 C -0.14 0.83 6.97 -25.92 -0.18 0.65 16 19 C 0.12 -0.42 4.96 -67.12 -0.33 -0.75 16 20 H 0.14 -0.60 8.14 -51.93 -0.42 -1.02 16 21 N -0.28 -0.04 3.53 -53.97 -0.19 -0.23 16 22 C -0.05 0.05 10.77 -17.05 -0.18 -0.13 16 23 C -0.05 -0.06 12.05 -17.73 -0.21 -0.27 16 24 N -0.27 -1.36 12.41 30.24 0.38 -0.98 16 25 N -0.09 -0.36 13.17 60.35 0.79 0.44 16 26 C -0.13 0.60 7.44 -25.92 -0.19 0.40 16 27 C -0.13 -0.20 9.55 -39.44 -0.38 -0.58 16 28 H 0.38 -1.35 8.70 45.56 0.40 -0.95 16 29 H 0.12 0.03 7.96 -51.93 -0.41 -0.38 16 30 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 31 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 32 H 0.13 -0.25 4.87 -52.48 -0.26 -0.51 16 33 H 0.13 -0.27 8.06 -52.49 -0.42 -0.70 16 34 H 0.13 -0.03 6.30 -52.49 -0.33 -0.36 16 35 H 0.07 -0.02 7.62 -51.93 -0.40 -0.42 16 36 H 0.07 -0.01 7.62 -51.93 -0.40 -0.41 16 37 H 0.11 -0.47 8.14 -51.93 -0.42 -0.90 16 38 H 0.11 -0.49 8.14 -51.93 -0.42 -0.91 16 39 H 0.40 -2.86 8.47 -40.82 -0.35 -3.20 16 40 H 0.07 -0.24 7.84 -51.93 -0.41 -0.64 16 41 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 42 H 0.09 -0.63 8.14 -51.93 -0.42 -1.05 16 43 H 0.10 -0.61 6.08 -51.93 -0.32 -0.92 16 44 H 0.19 -0.89 6.73 -52.49 -0.35 -1.25 16 45 H 0.19 -0.35 8.06 -52.48 -0.42 -0.77 16 46 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 47 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 48 H 0.13 0.21 8.06 -52.49 -0.42 -0.22 16 LS Contribution 400.61 15.07 6.04 6.04 Total: 0.00 -12.21 400.61 -9.37 -21.58 By element: Atomic # 1 Polarization: -11.50 SS G_CDS: -6.66 Total: -18.16 kcal Atomic # 6 Polarization: 0.69 SS G_CDS: -3.77 Total: -3.08 kcal Atomic # 7 Polarization: 1.40 SS G_CDS: 0.64 Total: 2.04 kcal Atomic # 8 Polarization: -2.06 SS G_CDS: -0.56 Total: -2.62 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.06 Total: -5.80 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -12.21 -9.37 -21.58 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 74.807 kcal (2) G-P(sol) polarization free energy of solvation -12.214 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.593 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.585 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.222 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds