Wall clock time and date at job start Sun Mar 7 2021 07:24:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86306 * 109.47049 * 2 1 4 4 C 1.50703 * 109.46912 * 240.00408 * 2 1 3 5 5 C 1.38243 * 119.97323 * 120.00129 * 4 2 1 6 6 C 1.38289 * 120.11362 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05159 * 359.97438 * 6 5 4 8 8 C 1.38747 * 119.94590 * 359.97438 * 7 6 5 9 9 O 1.35898 * 120.05546 * 179.97438 * 8 7 6 10 10 C 1.42904 * 116.99940 * 0.02562 * 9 8 7 11 11 C 1.53002 * 109.47009 * 179.97438 * 10 9 8 12 12 C 1.50701 * 109.47115 * 179.97438 * 11 10 9 13 13 O 1.21291 * 119.99773 * 0.02562 * 12 11 10 14 14 N 1.34773 * 120.00357 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00143 * 180.02562 * 14 12 11 16 16 C 1.53002 * 109.46901 * 179.97438 * 15 14 12 17 17 H 1.09000 * 112.84847 * 316.19433 * 16 15 14 18 18 C 1.53780 * 113.61604 * 87.50144 * 16 15 14 19 19 C 1.53777 * 87.08308 * 139.97737 * 18 16 15 20 20 H 1.08998 * 113.68901 * 89.12551 * 19 18 16 21 21 N 1.46499 * 113.61712 * 220.01879 * 19 18 16 22 22 C 1.35313 * 125.86691 * 12.21444 * 21 19 18 23 23 C 1.35353 * 106.17428 * 179.90096 * 22 21 19 24 24 N 1.33773 * 106.49767 * 0.35825 * 23 22 21 25 25 N 1.28640 * 108.88534 * 359.76686 * 24 23 22 26 26 C 1.53781 * 113.61343 * 184.99926 * 16 15 14 27 27 C 1.38163 * 119.97235 * 299.99554 * 4 2 1 28 28 H 0.96702 * 113.99834 * 59.99558 * 1 2 3 29 29 H 1.08991 * 109.47104 * 120.00507 * 2 1 3 30 30 H 1.48496 * 109.99558 * 60.00217 * 3 2 1 31 31 H 1.48494 * 109.99818 * 181.31720 * 3 2 1 32 32 H 1.08004 * 119.94085 * 0.02562 * 5 4 2 33 33 H 1.07993 * 119.96940 * 180.27537 * 6 5 4 34 34 H 1.08000 * 120.02369 * 180.02562 * 7 6 5 35 35 H 1.08999 * 109.47040 * 299.99833 * 10 9 8 36 36 H 1.08995 * 109.47340 * 59.99861 * 10 9 8 37 37 H 1.08999 * 109.47276 * 299.99925 * 11 10 9 38 38 H 1.08998 * 109.47492 * 59.99955 * 11 10 9 39 39 H 0.97004 * 119.99823 * 359.97438 * 14 12 11 40 40 H 1.08999 * 109.47012 * 299.99956 * 15 14 12 41 41 H 1.08995 * 109.47476 * 60.00051 * 15 14 12 42 42 H 1.08995 * 113.61553 * 254.53173 * 18 16 15 43 43 H 1.09007 * 113.61163 * 25.43295 * 18 16 15 44 44 H 1.07996 * 126.91148 * 0.02562 * 22 21 19 45 45 H 1.08003 * 126.75004 * 180.12133 * 23 22 21 46 46 H 1.09001 * 113.61370 * 334.56287 * 26 16 15 47 47 H 1.08996 * 113.61785 * 105.38424 * 26 16 15 48 48 H 1.08000 * 120.02728 * 0.03006 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2306 5 6 2.7261 -0.0379 -2.1401 6 6 3.1891 -0.6871 -3.2700 7 6 2.8586 -2.0097 -3.4921 8 6 2.0620 -2.6871 -2.5802 9 8 1.7351 -3.9883 -2.7967 10 6 2.2469 -4.5968 -3.9841 11 6 1.7774 -6.0513 -4.0548 12 6 2.3166 -6.6929 -5.3073 13 8 3.0088 -6.0502 -6.0682 14 7 2.0307 -7.9811 -5.5814 15 6 2.5553 -8.6049 -6.7987 16 6 2.0868 -10.0598 -6.8688 17 1 2.1716 -10.5782 -5.9138 18 6 0.7177 -10.2340 -7.5470 19 6 1.2985 -11.4890 -8.2197 20 1 1.1670 -12.3996 -7.6353 21 7 0.8918 -11.6468 -9.6182 22 6 0.2851 -10.7060 -10.3784 23 6 0.0941 -11.2694 -11.5942 24 7 0.5796 -12.5135 -11.5169 25 7 1.0451 -12.7060 -10.3333 26 6 2.6837 -10.8429 -8.0500 27 6 1.5973 -2.0331 -1.4487 28 1 -0.3933 0.4418 -0.7650 29 1 1.7924 -0.5139 0.8899 30 1 1.5616 2.4678 1.2085 31 1 3.5346 1.7703 -0.0321 32 1 2.9866 0.9959 -1.9676 33 1 3.8134 -0.1609 -3.9768 34 1 3.2208 -2.5164 -4.3745 35 1 1.8827 -4.0543 -4.8565 36 1 3.3363 -4.5675 -3.9668 37 1 2.1420 -6.5936 -3.1824 38 1 0.6880 -6.0811 -4.0719 39 1 1.4781 -8.4955 -4.9723 40 1 2.1904 -8.0628 -7.6710 41 1 3.6447 -8.5749 -6.7818 42 1 -0.0915 -10.4477 -6.8487 43 1 0.4732 -9.4362 -8.2485 44 1 0.0106 -9.7062 -10.0765 45 1 -0.3640 -10.8068 -12.4560 46 1 2.9766 -10.2116 -8.8890 47 1 3.4626 -11.5471 -7.7580 48 1 0.9761 -2.5579 -0.7380 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567720_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:24:47 Heat of formation + Delta-G solvation = 49.375176 kcal Electronic energy + Delta-G solvation = -29775.229880 eV Core-core repulsion = 25414.464934 eV Total energy + Delta-G solvation = -4360.764947 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -44.26321 -41.41970 -40.97110 -40.09687 -39.10204 -37.26471 -35.89478 -34.11952 -33.30289 -32.45752 -32.01751 -30.94478 -29.21574 -27.03551 -26.96672 -25.80922 -24.58201 -23.67131 -23.62229 -22.30586 -22.08699 -21.46902 -20.45909 -19.36184 -18.85250 -18.02697 -17.69413 -17.52507 -17.36736 -17.09864 -17.06061 -16.79675 -16.45091 -16.24896 -16.06990 -15.83533 -15.38913 -15.23035 -14.90254 -14.77212 -14.59592 -14.38842 -14.20296 -13.89328 -13.65585 -13.53513 -13.30978 -13.16136 -12.92658 -12.83482 -12.80413 -12.54088 -12.36845 -11.99711 -11.86861 -11.81350 -11.77440 -11.70851 -11.62610 -11.07803 -10.94665 -10.50313 -10.37877 -10.15312 -9.92860 -9.27640 -4.97930 0.19412 0.38626 0.62152 1.30438 1.43435 1.53259 1.58625 1.65331 1.72376 1.97565 2.48524 2.66465 3.04341 3.22245 3.47948 3.51043 3.56865 3.59692 3.66326 3.67292 3.85257 3.89842 3.95375 4.02239 4.09913 4.19613 4.23152 4.23668 4.28258 4.29312 4.39478 4.42907 4.50727 4.57397 4.61771 4.65888 4.69471 4.73133 4.77067 4.80026 4.85348 4.94877 4.97610 5.17312 5.24935 5.25638 5.37545 5.40769 5.43596 5.69861 5.70260 6.32653 6.46688 6.76218 7.16676 7.50064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.077 4.077 3 Si 0.784 3.216 4 C -0.084 4.084 5 C -0.158 4.158 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.117 3.883 9 O -0.324 6.324 10 C 0.073 3.927 11 C -0.133 4.133 12 C 0.519 3.481 13 O -0.586 6.586 14 N -0.712 5.712 15 C 0.131 3.869 16 C -0.098 4.098 17 H 0.132 0.868 18 C -0.127 4.127 19 C 0.100 3.900 20 H 0.143 0.857 21 N -0.275 5.275 22 C -0.037 4.037 23 C -0.068 4.068 24 N -0.320 5.320 25 N -0.130 5.130 26 C -0.134 4.134 27 C -0.141 4.141 28 H 0.396 0.604 29 H 0.107 0.893 30 H -0.299 1.299 31 H -0.285 1.285 32 H 0.147 0.853 33 H 0.153 0.847 34 H 0.137 0.863 35 H 0.066 0.934 36 H 0.062 0.938 37 H 0.125 0.875 38 H 0.128 0.872 39 H 0.421 0.579 40 H 0.066 0.934 41 H 0.061 0.939 42 H 0.111 0.889 43 H 0.105 0.895 44 H 0.228 0.772 45 H 0.212 0.788 46 H 0.086 0.914 47 H 0.092 0.908 48 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.485 3.228 2.600 4.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.187 4.187 3 Si 0.690 3.310 4 C -0.085 4.085 5 C -0.175 4.175 6 C -0.093 4.093 7 C -0.230 4.230 8 C 0.072 3.928 9 O -0.238 6.238 10 C -0.003 4.003 11 C -0.173 4.173 12 C 0.306 3.694 13 O -0.466 6.466 14 N -0.365 5.365 15 C 0.007 3.993 16 C -0.117 4.117 17 H 0.150 0.850 18 C -0.165 4.165 19 C 0.000 4.000 20 H 0.161 0.839 21 N -0.069 5.069 22 C -0.188 4.188 23 C -0.226 4.226 24 N -0.185 5.185 25 N -0.108 5.108 26 C -0.173 4.173 27 C -0.160 4.160 28 H 0.246 0.754 29 H 0.124 0.876 30 H -0.227 1.227 31 H -0.212 1.212 32 H 0.165 0.835 33 H 0.170 0.830 34 H 0.155 0.845 35 H 0.085 0.915 36 H 0.081 0.919 37 H 0.143 0.857 38 H 0.146 0.854 39 H 0.259 0.741 40 H 0.084 0.916 41 H 0.079 0.921 42 H 0.129 0.871 43 H 0.123 0.877 44 H 0.244 0.756 45 H 0.228 0.772 46 H 0.104 0.896 47 H 0.111 0.889 48 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.019 2.292 3.101 3.988 hybrid contribution -0.200 -0.045 0.102 0.229 sum -1.220 2.247 3.203 4.098 Atomic orbital electron populations 1.86469 1.17123 1.82218 1.50484 1.25281 0.85389 1.11179 0.96815 0.93545 0.77808 0.74947 0.84690 1.20238 0.97652 0.93660 0.96915 1.21175 1.00423 1.00714 0.95235 1.21250 0.97542 0.93488 0.97038 1.21549 1.03185 0.97064 1.01184 1.19129 0.95216 0.83533 0.94892 1.85954 1.71400 1.22722 1.43756 1.22462 0.98842 0.93450 0.85540 1.21439 1.05048 0.93773 0.97005 1.20581 0.79525 0.82283 0.86976 1.90756 1.40260 1.63921 1.51692 1.45796 1.53637 1.11451 1.25605 1.21296 0.98875 0.91910 0.87172 1.22514 0.95358 0.94215 0.99650 0.84989 1.23616 0.98544 0.94550 0.99793 1.23819 0.98581 1.02555 0.75076 0.83898 1.47843 1.37235 1.08820 1.12961 1.24185 1.03146 0.99646 0.91861 1.24235 1.05998 0.91870 1.00525 1.75086 1.13841 1.18564 1.11025 1.78257 1.21825 1.11430 0.99304 1.23419 0.95584 0.99342 0.98985 1.20309 1.03779 0.94632 0.97290 0.75429 0.87572 1.22692 1.21162 0.83540 0.82982 0.84527 0.91546 0.91931 0.85678 0.85374 0.74126 0.91599 0.92088 0.87098 0.87695 0.75563 0.77153 0.89557 0.88906 0.85474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.36 12.77 -148.98 -1.90 -2.26 16 2 C -0.08 0.00 2.82 71.24 0.20 0.20 16 3 Si 0.78 -1.93 29.79 68.60 2.04 0.11 16 4 C -0.08 -0.11 5.39 -19.88 -0.11 -0.21 16 5 C -0.16 0.15 8.67 22.28 0.19 0.35 16 6 C -0.08 0.05 10.04 22.25 0.22 0.28 16 7 C -0.21 -0.40 9.04 22.36 0.20 -0.20 16 8 C 0.12 0.48 6.69 22.50 0.15 0.63 16 9 O -0.32 -0.95 10.14 -92.40 -0.94 -1.88 16 10 C 0.07 -0.05 4.03 71.98 0.29 0.24 16 11 C -0.13 0.93 6.07 29.85 0.18 1.11 16 12 C 0.52 -1.72 7.83 87.66 0.69 -1.04 16 13 O -0.59 -3.78 15.98 -3.06 -0.05 -3.83 16 14 N -0.71 7.18 5.56 -463.06 -2.57 4.60 16 15 C 0.13 -1.20 5.51 86.38 0.48 -0.72 16 16 C -0.10 1.38 3.75 -10.27 -0.04 1.35 16 17 H 0.13 -2.33 8.14 -2.39 -0.02 -2.35 16 18 C -0.13 1.80 6.97 31.12 0.22 2.02 16 19 C 0.10 -0.80 4.96 45.52 0.23 -0.58 16 20 H 0.14 -1.34 8.14 -2.39 -0.02 -1.36 16 21 N -0.27 -0.10 3.53 -324.68 -1.15 -1.25 16 22 C -0.04 0.10 10.77 83.49 0.90 1.00 16 23 C -0.07 -0.20 12.05 83.73 1.01 0.81 16 24 N -0.32 -3.76 12.41 -58.25 -0.72 -4.48 16 25 N -0.13 -1.28 13.17 37.02 0.49 -0.79 16 26 C -0.13 1.26 7.44 31.12 0.23 1.49 16 27 C -0.14 -0.57 9.55 22.36 0.21 -0.35 16 28 H 0.40 -2.97 8.70 -74.06 -0.64 -3.61 16 29 H 0.11 0.14 7.96 -2.39 -0.02 0.12 16 30 H -0.30 -1.47 7.11 99.48 0.71 -0.76 16 31 H -0.28 -0.58 7.11 99.48 0.71 0.13 16 32 H 0.15 -0.79 4.87 -2.91 -0.01 -0.81 16 33 H 0.15 -0.84 8.06 -2.91 -0.02 -0.87 16 34 H 0.14 0.04 6.30 -2.91 -0.02 0.02 16 35 H 0.07 0.02 7.62 -2.39 -0.02 0.00 16 36 H 0.06 0.06 7.62 -2.39 -0.02 0.04 16 37 H 0.13 -1.29 8.14 -2.39 -0.02 -1.31 16 38 H 0.13 -1.39 8.14 -2.39 -0.02 -1.41 16 39 H 0.42 -7.02 8.47 -92.71 -0.79 -7.81 16 40 H 0.07 -0.46 7.84 -2.39 -0.02 -0.48 16 41 H 0.06 -0.32 8.14 -2.39 -0.02 -0.34 16 42 H 0.11 -1.89 8.14 -2.39 -0.02 -1.91 16 43 H 0.10 -1.54 6.08 -2.38 -0.01 -1.55 16 44 H 0.23 -2.70 6.73 -2.91 -0.02 -2.72 16 45 H 0.21 -0.74 8.06 -2.91 -0.02 -0.77 16 46 H 0.09 -0.58 8.10 -2.39 -0.02 -0.60 16 47 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 48 H 0.13 0.57 8.06 -2.91 -0.02 0.55 16 Total: 0.00 -32.14 400.61 0.07 -32.07 By element: Atomic # 1 Polarization: -28.28 SS G_CDS: -0.38 Total: -28.66 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: 5.26 Total: 6.37 kcal Atomic # 7 Polarization: 2.03 SS G_CDS: -3.96 Total: -1.92 kcal Atomic # 8 Polarization: -5.09 SS G_CDS: -2.89 Total: -7.97 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: 2.04 Total: 0.11 kcal Total: -32.14 0.07 -32.07 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.443 kcal (2) G-P(sol) polarization free energy of solvation -32.141 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.302 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.073 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.068 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds