Wall clock time and date at job start Sun Mar 7 2021 07:24:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47237 * 2 1 4 4 C 1.50701 * 109.47038 * 120.00309 * 2 1 3 5 5 C 1.38244 * 119.96929 * 245.02489 * 4 2 1 6 6 C 1.38293 * 120.10904 * 179.97438 * 5 4 2 7 7 C 1.38121 * 120.05612 * 359.67624 * 6 5 4 8 8 C 1.38745 * 119.94183 * 0.59516 * 7 6 5 9 9 O 1.35907 * 120.05819 * 179.70065 * 8 7 6 10 10 C 1.42903 * 116.99624 * 359.72817 * 9 8 7 11 11 C 1.52999 * 109.47396 * 180.02562 * 10 9 8 12 12 C 1.52990 * 109.47335 * 180.02562 * 11 10 9 13 13 C 1.50700 * 109.47295 * 179.97438 * 12 11 10 14 14 O 1.21287 * 119.99735 * 0.02562 * 13 12 11 15 15 N 1.34777 * 120.00100 * 179.97438 * 13 12 11 16 16 C 1.46501 * 119.99813 * 180.02562 * 15 13 12 17 17 C 1.52996 * 109.47279 * 180.02562 * 16 15 13 18 18 H 1.09004 * 112.84963 * 43.80202 * 17 16 15 19 19 C 1.53779 * 113.61823 * 174.99617 * 17 16 15 20 20 C 1.53778 * 87.08107 * 140.06661 * 19 17 16 21 21 H 1.09002 * 113.61629 * 89.20431 * 20 19 17 22 22 N 1.46502 * 113.61348 * 220.02377 * 20 19 17 23 23 C 1.35315 * 125.87191 * 83.47339 * 22 20 19 24 24 C 1.35344 * 106.17731 * 179.73450 * 23 22 20 25 25 N 1.33776 * 106.49718 * 359.97438 * 24 23 22 26 26 N 1.28633 * 108.88517 * 359.97438 * 25 24 23 27 27 C 1.53782 * 87.17405 * 334.61017 * 20 19 17 28 28 C 1.38166 * 119.97622 * 64.99925 * 4 2 1 29 29 H 0.96696 * 114.00235 * 300.00072 * 1 2 3 30 30 H 1.08998 * 109.47435 * 239.99737 * 2 1 3 31 31 H 1.48494 * 110.00001 * 299.99638 * 3 2 1 32 32 H 1.48497 * 109.99599 * 61.31858 * 3 2 1 33 33 H 1.08004 * 119.94693 * 359.97357 * 5 4 2 34 34 H 1.08006 * 119.96914 * 179.97438 * 6 5 4 35 35 H 1.07997 * 120.02496 * 180.32104 * 7 6 5 36 36 H 1.09002 * 109.47269 * 60.00015 * 10 9 8 37 37 H 1.09008 * 109.46958 * 299.99934 * 10 9 8 38 38 H 1.09002 * 109.47006 * 59.99723 * 11 10 9 39 39 H 1.09004 * 109.46988 * 300.00336 * 11 10 9 40 40 H 1.09002 * 109.47346 * 59.99874 * 12 11 10 41 41 H 1.09004 * 109.47310 * 300.00082 * 12 11 10 42 42 H 0.96995 * 119.99907 * 0.02562 * 15 13 12 43 43 H 1.09002 * 109.47173 * 60.00048 * 16 15 13 44 44 H 1.09008 * 109.47067 * 299.99959 * 16 15 13 45 45 H 1.09000 * 113.61255 * 25.52205 * 19 17 16 46 46 H 1.08994 * 113.61761 * 254.61841 * 19 17 16 47 47 H 1.07998 * 126.90914 * 359.71348 * 23 22 20 48 48 H 1.08000 * 126.75551 * 180.02562 * 24 23 22 49 49 H 1.09001 * 113.61378 * 139.93896 * 27 20 19 50 50 H 1.09000 * 113.61589 * 270.84029 * 27 20 19 51 51 H 1.08004 * 120.02204 * 0.04026 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6382 -0.0116 2.1912 6 6 3.1000 -0.6606 3.3217 7 6 2.8502 -2.0077 3.4967 8 6 2.1458 -2.7125 2.5312 9 8 1.9038 -4.0394 2.6981 10 6 2.4092 -4.6461 3.8892 11 6 2.0421 -6.1314 3.9004 12 6 2.5826 -6.7808 5.1758 13 6 2.2204 -8.2436 5.1871 14 8 1.5922 -8.7199 4.2654 15 7 2.5954 -9.0227 6.2209 16 6 2.2438 -10.4449 6.2315 17 6 2.7842 -11.0944 7.5071 18 1 2.6142 -10.4869 8.3961 19 6 2.3641 -12.5640 7.6757 20 6 3.7873 -12.8294 8.1942 21 1 3.8913 -12.6977 9.2713 22 7 4.3599 -14.0907 7.7174 23 6 4.9772 -14.2820 6.5285 24 6 5.3526 -15.5821 6.5035 25 7 4.9525 -16.1155 7.6632 26 7 4.3685 -15.2058 8.3604 27 6 4.2312 -11.6039 7.3781 28 6 1.6845 -2.0596 1.3977 29 1 -0.3933 0.4417 0.7650 30 1 1.7923 -0.5139 -0.8899 31 1 1.5616 2.4678 -1.2085 32 1 1.5879 2.4585 1.2242 33 1 2.8301 1.0429 2.0587 34 1 3.6525 -0.1125 4.0706 35 1 3.2066 -2.5129 4.3822 36 1 1.9722 -4.1570 4.7598 37 1 3.4937 -4.5401 3.9190 38 1 2.4794 -6.6203 3.0298 39 1 0.9577 -6.2378 3.8703 40 1 2.1449 -6.2918 6.0461 41 1 3.6670 -6.6744 5.2063 42 1 3.0981 -8.6419 6.9578 43 1 2.6812 -10.9338 5.3610 44 1 1.1594 -10.5513 6.2014 45 1 2.1420 -13.0655 6.7338 46 1 1.5902 -12.7133 8.4286 47 1 5.1376 -13.5455 5.7551 48 1 5.8736 -16.0890 5.7047 49 1 4.9625 -10.9793 7.8911 50 1 4.5206 -11.8424 6.3546 51 1 1.1324 -2.6051 0.6467 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567720_4549616.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:24:52 Heat of formation + Delta-G solvation = 47.070514 kcal Electronic energy + Delta-G solvation = -31311.217671 eV Core-core repulsion = 26794.815167 eV Total energy + Delta-G solvation = -4516.402503 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -44.24470 -41.36778 -41.16768 -40.28390 -39.21739 -37.39375 -36.02773 -35.00288 -34.08825 -32.50123 -31.99400 -31.34494 -29.92812 -28.05386 -27.36652 -26.82247 -25.36077 -23.77894 -23.63097 -23.41034 -22.40067 -21.93036 -21.60511 -20.74372 -19.30791 -18.99625 -18.09791 -17.88977 -17.63589 -17.47011 -17.30620 -17.17421 -16.87321 -16.68088 -16.48230 -16.16239 -15.96089 -15.53914 -15.40172 -15.23515 -15.00063 -14.78379 -14.35874 -14.24269 -14.08979 -14.00369 -13.82733 -13.63046 -13.46615 -13.28109 -13.09495 -12.91070 -12.79629 -12.64331 -12.46123 -12.32363 -12.19718 -12.07270 -11.91534 -11.73623 -11.73021 -11.55582 -11.07122 -10.96744 -10.63837 -10.34060 -10.30040 -9.95709 -9.25273 -4.96609 0.19414 0.40140 0.60893 1.25683 1.27599 1.49269 1.58801 1.67419 1.76061 1.94933 2.23010 2.65501 2.71502 2.85853 3.12631 3.20814 3.37062 3.45200 3.50936 3.61186 3.67986 3.69903 3.75033 3.82261 3.86386 3.97858 4.00187 4.05590 4.08273 4.10852 4.17244 4.18251 4.19903 4.28759 4.30252 4.32044 4.38750 4.40301 4.50805 4.53482 4.54527 4.64939 4.73314 4.84611 4.87565 4.95678 5.06810 5.19571 5.21815 5.26011 5.35365 5.42831 5.59775 5.68021 6.24723 6.38629 6.39630 7.04721 7.58155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.077 4.077 3 Si 0.691 3.309 4 C -0.078 4.078 5 C -0.157 4.157 6 C -0.074 4.074 7 C -0.205 4.205 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.106 4.106 12 C -0.137 4.137 13 C 0.514 3.486 14 O -0.532 6.532 15 N -0.733 5.733 16 C 0.131 3.869 17 C -0.118 4.118 18 H 0.110 0.890 19 C -0.132 4.132 20 C 0.115 3.885 21 H 0.137 0.863 22 N -0.282 5.282 23 C -0.052 4.052 24 C -0.049 4.049 25 N -0.272 5.272 26 N -0.085 5.085 27 C -0.139 4.139 28 C -0.126 4.126 29 H 0.376 0.624 30 H 0.120 0.880 31 H -0.257 1.257 32 H -0.260 1.260 33 H 0.129 0.871 34 H 0.130 0.870 35 H 0.129 0.871 36 H 0.064 0.936 37 H 0.065 0.935 38 H 0.084 0.916 39 H 0.083 0.917 40 H 0.098 0.902 41 H 0.099 0.901 42 H 0.402 0.598 43 H 0.072 0.928 44 H 0.075 0.925 45 H 0.097 0.903 46 H 0.093 0.907 47 H 0.188 0.812 48 H 0.191 0.809 49 H 0.091 0.909 50 H 0.100 0.900 51 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.674 5.982 3.580 8.393 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.187 4.187 3 Si 0.592 3.408 4 C -0.079 4.079 5 C -0.175 4.175 6 C -0.092 4.092 7 C -0.223 4.223 8 C 0.086 3.914 9 O -0.225 6.225 10 C -0.016 4.016 11 C -0.144 4.144 12 C -0.177 4.177 13 C 0.300 3.700 14 O -0.408 6.408 15 N -0.386 5.386 16 C 0.007 3.993 17 C -0.137 4.137 18 H 0.128 0.872 19 C -0.172 4.172 20 C 0.014 3.986 21 H 0.155 0.845 22 N -0.075 5.075 23 C -0.202 4.202 24 C -0.206 4.206 25 N -0.137 5.137 26 N -0.065 5.065 27 C -0.177 4.177 28 C -0.144 4.144 29 H 0.224 0.776 30 H 0.138 0.862 31 H -0.182 1.182 32 H -0.185 1.185 33 H 0.146 0.854 34 H 0.148 0.852 35 H 0.147 0.853 36 H 0.082 0.918 37 H 0.083 0.917 38 H 0.102 0.898 39 H 0.102 0.898 40 H 0.117 0.883 41 H 0.117 0.883 42 H 0.237 0.763 43 H 0.091 0.909 44 H 0.093 0.907 45 H 0.116 0.884 46 H 0.111 0.889 47 H 0.205 0.795 48 H 0.208 0.792 49 H 0.110 0.890 50 H 0.118 0.882 51 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.568 5.267 3.542 7.281 hybrid contribution -0.311 0.616 0.255 0.735 sum 3.257 5.883 3.797 7.722 Atomic orbital electron populations 1.86617 1.17522 1.79993 1.49266 1.25092 0.84102 1.11156 0.98321 0.94869 0.91650 0.74164 0.80098 1.20076 0.97827 0.93591 0.96384 1.20977 1.01471 0.99947 0.95120 1.20911 0.97617 0.93669 0.96989 1.21309 1.04681 0.95948 1.00401 1.19017 0.94959 0.82934 0.94444 1.86089 1.74235 1.19964 1.42215 1.22819 0.98759 0.93751 0.86230 1.21233 1.03542 0.91875 0.97731 1.21525 1.03511 0.92357 1.00356 1.20597 0.79001 0.88637 0.81775 1.90774 1.39167 1.75430 1.35450 1.45982 1.58710 1.09950 1.23949 1.21305 1.00951 0.80402 0.96634 1.22653 0.95541 0.96190 0.99333 0.87158 1.23424 0.95522 0.94851 1.03360 1.23381 0.95389 0.78414 1.01447 0.84509 1.47509 1.37473 1.10239 1.12315 1.23581 1.04110 1.00242 0.92305 1.23689 1.05778 0.92530 0.98642 1.75167 1.11355 1.23062 1.04138 1.78348 1.18726 0.88593 1.20791 1.23631 0.97812 0.94730 1.01532 1.20287 1.03115 0.93715 0.97308 0.77625 0.86227 1.18214 1.18524 0.85388 0.85240 0.85281 0.91804 0.91725 0.89756 0.89796 0.88327 0.88303 0.76346 0.90935 0.90657 0.88407 0.88864 0.79451 0.79217 0.88990 0.88180 0.84818 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.86 12.83 -35.23 -0.45 -1.32 16 2 C -0.08 0.00 2.80 36.01 0.10 0.10 16 3 Si 0.69 -0.71 29.88 -169.99 -5.08 -5.79 16 4 C -0.08 -0.05 5.35 -104.65 -0.56 -0.60 16 5 C -0.16 0.06 8.67 -39.56 -0.34 -0.28 16 6 C -0.07 0.06 10.04 -39.60 -0.40 -0.34 16 7 C -0.20 0.05 9.04 -39.44 -0.36 -0.31 16 8 C 0.13 0.21 6.69 -39.22 -0.26 -0.06 16 9 O -0.31 -0.56 10.14 -19.45 -0.20 -0.75 16 10 C 0.06 -0.11 4.74 37.16 0.18 0.07 16 11 C -0.11 0.15 4.87 -26.74 -0.13 0.02 16 12 C -0.14 0.56 5.70 -27.89 -0.16 0.40 16 13 C 0.51 -0.63 7.83 -10.98 -0.09 -0.71 16 14 O -0.53 -1.98 15.98 5.55 0.09 -1.89 16 15 N -0.73 3.07 5.56 -60.29 -0.33 2.73 16 16 C 0.13 -0.50 5.51 -4.04 -0.02 -0.52 16 17 C -0.12 0.71 3.75 -89.72 -0.34 0.38 16 18 H 0.11 -0.81 8.14 -51.93 -0.42 -1.23 16 19 C -0.13 0.58 7.44 -25.92 -0.19 0.38 16 20 C 0.12 -0.41 4.95 -67.12 -0.33 -0.74 16 21 H 0.14 -0.59 8.14 -51.93 -0.42 -1.01 16 22 N -0.28 -0.07 3.53 -53.97 -0.19 -0.26 16 23 C -0.05 0.04 10.78 -17.05 -0.18 -0.14 16 24 C -0.05 -0.06 12.05 -17.74 -0.21 -0.28 16 25 N -0.27 -1.39 12.41 30.23 0.38 -1.01 16 26 N -0.09 -0.36 13.17 60.35 0.79 0.43 16 27 C -0.14 0.82 7.01 -25.83 -0.18 0.64 16 28 C -0.13 -0.23 9.62 -39.43 -0.38 -0.61 16 29 H 0.38 -0.47 8.70 45.56 0.40 -0.07 16 30 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 31 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 32 H -0.26 -0.19 7.01 56.52 0.40 0.20 16 33 H 0.13 -0.26 4.84 -52.48 -0.25 -0.51 16 34 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 35 H 0.13 -0.31 6.30 -52.49 -0.33 -0.64 16 36 H 0.06 -0.19 7.65 -51.93 -0.40 -0.59 16 37 H 0.06 -0.21 7.68 -51.92 -0.40 -0.61 16 38 H 0.08 0.02 8.10 -51.93 -0.42 -0.40 16 39 H 0.08 0.03 8.10 -51.93 -0.42 -0.39 16 40 H 0.10 -0.59 8.14 -51.93 -0.42 -1.02 16 41 H 0.10 -0.61 8.14 -51.93 -0.42 -1.03 16 42 H 0.40 -2.87 8.47 -40.82 -0.35 -3.22 16 43 H 0.07 -0.20 7.86 -51.93 -0.41 -0.61 16 44 H 0.08 -0.17 8.14 -51.92 -0.42 -0.59 16 45 H 0.10 -0.32 8.10 -51.93 -0.42 -0.75 16 46 H 0.09 -0.41 8.14 -51.93 -0.42 -0.84 16 47 H 0.19 -0.86 6.74 -52.49 -0.35 -1.21 16 48 H 0.19 -0.32 8.06 -52.49 -0.42 -0.75 16 49 H 0.09 -0.62 8.14 -51.93 -0.42 -1.05 16 50 H 0.10 -0.59 6.10 -51.93 -0.32 -0.90 16 51 H 0.13 0.29 8.06 -52.48 -0.42 -0.14 16 LS Contribution 422.21 15.07 6.36 6.36 Total: 0.00 -12.95 422.21 -10.01 -22.95 By element: Atomic # 1 Polarization: -11.34 SS G_CDS: -7.51 Total: -18.85 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -3.86 Total: -2.61 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: 0.64 Total: 1.89 kcal Atomic # 8 Polarization: -3.40 SS G_CDS: -0.56 Total: -3.96 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.08 Total: -5.79 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -12.95 -10.01 -22.95 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_4549616.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.024 kcal (2) G-P(sol) polarization free energy of solvation -12.947 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.077 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.954 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds