Wall clock time and date at job start Sun Mar 7 2021 07:24:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47237 * 2 1 4 4 C 1.50701 * 109.47038 * 120.00309 * 2 1 3 5 5 C 1.38244 * 119.96929 * 245.02489 * 4 2 1 6 6 C 1.38293 * 120.10904 * 179.97438 * 5 4 2 7 7 C 1.38121 * 120.05612 * 359.67624 * 6 5 4 8 8 C 1.38745 * 119.94183 * 0.59516 * 7 6 5 9 9 O 1.35907 * 120.05819 * 179.70065 * 8 7 6 10 10 C 1.42903 * 116.99624 * 359.72817 * 9 8 7 11 11 C 1.52999 * 109.47396 * 180.02562 * 10 9 8 12 12 C 1.52990 * 109.47335 * 180.02562 * 11 10 9 13 13 C 1.50700 * 109.47295 * 179.97438 * 12 11 10 14 14 O 1.21287 * 119.99735 * 0.02562 * 13 12 11 15 15 N 1.34777 * 120.00100 * 179.97438 * 13 12 11 16 16 C 1.46501 * 119.99813 * 180.02562 * 15 13 12 17 17 C 1.52996 * 109.47279 * 180.02562 * 16 15 13 18 18 H 1.09004 * 112.84963 * 43.80202 * 17 16 15 19 19 C 1.53779 * 113.61823 * 174.99617 * 17 16 15 20 20 C 1.53778 * 87.08107 * 140.06661 * 19 17 16 21 21 H 1.09002 * 113.61629 * 89.20431 * 20 19 17 22 22 N 1.46502 * 113.61348 * 220.02377 * 20 19 17 23 23 C 1.35315 * 125.87191 * 83.47339 * 22 20 19 24 24 C 1.35344 * 106.17731 * 179.73450 * 23 22 20 25 25 N 1.33776 * 106.49718 * 359.97438 * 24 23 22 26 26 N 1.28633 * 108.88517 * 359.97438 * 25 24 23 27 27 C 1.53782 * 87.17405 * 334.61017 * 20 19 17 28 28 C 1.38166 * 119.97622 * 64.99925 * 4 2 1 29 29 H 0.96696 * 114.00235 * 300.00072 * 1 2 3 30 30 H 1.08998 * 109.47435 * 239.99737 * 2 1 3 31 31 H 1.48494 * 110.00001 * 299.99638 * 3 2 1 32 32 H 1.48497 * 109.99599 * 61.31858 * 3 2 1 33 33 H 1.08004 * 119.94693 * 359.97357 * 5 4 2 34 34 H 1.08006 * 119.96914 * 179.97438 * 6 5 4 35 35 H 1.07997 * 120.02496 * 180.32104 * 7 6 5 36 36 H 1.09002 * 109.47269 * 60.00015 * 10 9 8 37 37 H 1.09008 * 109.46958 * 299.99934 * 10 9 8 38 38 H 1.09002 * 109.47006 * 59.99723 * 11 10 9 39 39 H 1.09004 * 109.46988 * 300.00336 * 11 10 9 40 40 H 1.09002 * 109.47346 * 59.99874 * 12 11 10 41 41 H 1.09004 * 109.47310 * 300.00082 * 12 11 10 42 42 H 0.96995 * 119.99907 * 0.02562 * 15 13 12 43 43 H 1.09002 * 109.47173 * 60.00048 * 16 15 13 44 44 H 1.09008 * 109.47067 * 299.99959 * 16 15 13 45 45 H 1.09000 * 113.61255 * 25.52205 * 19 17 16 46 46 H 1.08994 * 113.61761 * 254.61841 * 19 17 16 47 47 H 1.07998 * 126.90914 * 359.71348 * 23 22 20 48 48 H 1.08000 * 126.75551 * 180.02562 * 24 23 22 49 49 H 1.09001 * 113.61378 * 139.93896 * 27 20 19 50 50 H 1.09000 * 113.61589 * 270.84029 * 27 20 19 51 51 H 1.08004 * 120.02204 * 0.04026 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6382 -0.0116 2.1912 6 6 3.1000 -0.6606 3.3217 7 6 2.8502 -2.0077 3.4967 8 6 2.1458 -2.7125 2.5312 9 8 1.9038 -4.0394 2.6981 10 6 2.4092 -4.6461 3.8892 11 6 2.0421 -6.1314 3.9004 12 6 2.5826 -6.7808 5.1758 13 6 2.2204 -8.2436 5.1871 14 8 1.5922 -8.7199 4.2654 15 7 2.5954 -9.0227 6.2209 16 6 2.2438 -10.4449 6.2315 17 6 2.7842 -11.0944 7.5071 18 1 2.6142 -10.4869 8.3961 19 6 2.3641 -12.5640 7.6757 20 6 3.7873 -12.8294 8.1942 21 1 3.8913 -12.6977 9.2713 22 7 4.3599 -14.0907 7.7174 23 6 4.9772 -14.2820 6.5285 24 6 5.3526 -15.5821 6.5035 25 7 4.9525 -16.1155 7.6632 26 7 4.3685 -15.2058 8.3604 27 6 4.2312 -11.6039 7.3781 28 6 1.6845 -2.0596 1.3977 29 1 -0.3933 0.4417 0.7650 30 1 1.7923 -0.5139 -0.8899 31 1 1.5616 2.4678 -1.2085 32 1 1.5879 2.4585 1.2242 33 1 2.8301 1.0429 2.0587 34 1 3.6525 -0.1125 4.0706 35 1 3.2066 -2.5129 4.3822 36 1 1.9722 -4.1570 4.7598 37 1 3.4937 -4.5401 3.9190 38 1 2.4794 -6.6203 3.0298 39 1 0.9577 -6.2378 3.8703 40 1 2.1449 -6.2918 6.0461 41 1 3.6670 -6.6744 5.2063 42 1 3.0981 -8.6419 6.9578 43 1 2.6812 -10.9338 5.3610 44 1 1.1594 -10.5513 6.2014 45 1 2.1420 -13.0655 6.7338 46 1 1.5902 -12.7133 8.4286 47 1 5.1376 -13.5455 5.7551 48 1 5.8736 -16.0890 5.7047 49 1 4.9625 -10.9793 7.8911 50 1 4.5206 -11.8424 6.3546 51 1 1.1324 -2.6051 0.6467 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567720_4549616.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:24:51 Heat of formation + Delta-G solvation = 42.700839 kcal Electronic energy + Delta-G solvation = -31311.407154 eV Core-core repulsion = 26794.815167 eV Total energy + Delta-G solvation = -4516.591987 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -44.26753 -41.29717 -40.99768 -40.07246 -39.20288 -37.41751 -35.87953 -34.87727 -34.04489 -32.47098 -32.02223 -31.28376 -29.75198 -27.85344 -26.98415 -26.78757 -25.23211 -23.71674 -23.63718 -23.32935 -22.26822 -21.85936 -21.42933 -20.43438 -19.25215 -18.85779 -17.94379 -17.91167 -17.47614 -17.36115 -17.18597 -17.01584 -16.82011 -16.54810 -16.31706 -16.15883 -15.87297 -15.52450 -15.27616 -15.08501 -14.89609 -14.69808 -14.25976 -14.19692 -14.10582 -13.66192 -13.52586 -13.41287 -13.29128 -13.11192 -13.07873 -12.81665 -12.73286 -12.53998 -12.29033 -12.27654 -11.90684 -11.86076 -11.76694 -11.70996 -11.58939 -11.53741 -11.01047 -10.90026 -10.65747 -10.38397 -10.10447 -9.92809 -9.23426 -4.90746 0.22699 0.42246 0.61522 1.29558 1.43673 1.58083 1.61425 1.64244 1.92027 2.00715 2.40304 2.68647 3.04906 3.22140 3.40771 3.48291 3.56855 3.65319 3.66993 3.71487 3.86504 3.90340 3.97413 4.00375 4.12764 4.19011 4.23326 4.23905 4.26372 4.29056 4.37247 4.41582 4.44715 4.46772 4.55875 4.57376 4.66077 4.67713 4.70138 4.75005 4.80894 4.85943 4.94715 5.00094 5.03477 5.16881 5.19278 5.25661 5.30299 5.39970 5.46467 5.46956 5.70014 5.76132 6.44700 6.46283 6.56147 7.28181 7.49570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.093 4.093 3 Si 0.782 3.218 4 C -0.082 4.082 5 C -0.162 4.162 6 C -0.073 4.073 7 C -0.204 4.204 8 C 0.116 3.884 9 O -0.340 6.340 10 C 0.057 3.943 11 C -0.103 4.103 12 C -0.127 4.127 13 C 0.507 3.493 14 O -0.593 6.593 15 N -0.715 5.715 16 C 0.131 3.869 17 C -0.097 4.097 18 H 0.133 0.867 19 C -0.136 4.136 20 C 0.101 3.899 21 H 0.145 0.855 22 N -0.275 5.275 23 C -0.037 4.037 24 C -0.068 4.068 25 N -0.321 5.321 26 N -0.129 5.129 27 C -0.126 4.126 28 C -0.152 4.152 29 H 0.386 0.614 30 H 0.119 0.881 31 H -0.305 1.305 32 H -0.276 1.276 33 H 0.146 0.854 34 H 0.159 0.841 35 H 0.155 0.845 36 H 0.082 0.918 37 H 0.086 0.914 38 H 0.059 0.941 39 H 0.056 0.944 40 H 0.128 0.872 41 H 0.131 0.869 42 H 0.421 0.579 43 H 0.061 0.939 44 H 0.056 0.944 45 H 0.084 0.916 46 H 0.092 0.908 47 H 0.227 0.773 48 H 0.212 0.788 49 H 0.112 0.888 50 H 0.103 0.897 51 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.675 8.364 5.433 12.001 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.200 4.200 3 Si 0.687 3.313 4 C -0.082 4.082 5 C -0.179 4.179 6 C -0.091 4.091 7 C -0.223 4.223 8 C 0.071 3.929 9 O -0.254 6.254 10 C -0.017 4.017 11 C -0.141 4.141 12 C -0.166 4.166 13 C 0.295 3.705 14 O -0.474 6.474 15 N -0.368 5.368 16 C 0.006 3.994 17 C -0.116 4.116 18 H 0.151 0.849 19 C -0.175 4.175 20 C 0.000 4.000 21 H 0.162 0.838 22 N -0.068 5.068 23 C -0.189 4.189 24 C -0.226 4.226 25 N -0.185 5.185 26 N -0.108 5.108 27 C -0.164 4.164 28 C -0.171 4.171 29 H 0.235 0.765 30 H 0.137 0.863 31 H -0.233 1.233 32 H -0.203 1.203 33 H 0.163 0.837 34 H 0.176 0.824 35 H 0.172 0.828 36 H 0.101 0.899 37 H 0.104 0.896 38 H 0.078 0.922 39 H 0.075 0.925 40 H 0.146 0.854 41 H 0.149 0.851 42 H 0.259 0.741 43 H 0.079 0.921 44 H 0.075 0.925 45 H 0.103 0.897 46 H 0.111 0.889 47 H 0.243 0.757 48 H 0.228 0.772 49 H 0.131 0.869 50 H 0.121 0.879 51 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 5.589 7.629 5.481 10.931 hybrid contribution -0.993 -0.117 -0.376 1.068 sum 4.596 7.512 5.104 10.179 Atomic orbital electron populations 1.86579 1.18644 1.80546 1.50113 1.25426 0.83442 1.12723 0.98457 0.93854 0.90094 0.70959 0.76404 1.20115 0.98137 0.93131 0.96833 1.21223 1.00978 1.00767 0.94975 1.21307 0.96957 0.93605 0.97184 1.21605 1.03812 0.96279 1.00571 1.19193 0.95688 0.83060 0.94938 1.86059 1.74944 1.20397 1.44035 1.23014 1.00051 0.92953 0.85695 1.21165 1.01809 0.92617 0.98548 1.21531 1.05434 0.90002 0.99671 1.21177 0.78068 0.89952 0.81339 1.90756 1.42077 1.76671 1.37862 1.45848 1.57732 1.09555 1.23673 1.21244 0.99917 0.80770 0.97427 1.22534 0.95162 0.94969 0.98912 0.84872 1.23428 0.95240 0.96121 1.02700 1.23829 0.95952 0.77730 1.02465 0.83764 1.47848 1.36426 1.10278 1.12298 1.24169 1.02099 1.00240 0.92356 1.24227 1.06270 0.93745 0.98355 1.75084 1.12927 1.24596 1.05919 1.78250 1.20542 0.89909 1.22058 1.23642 0.98099 0.93261 1.01440 1.20340 1.04388 0.94571 0.97813 0.76470 0.86270 1.23333 1.20262 0.83669 0.82365 0.82769 0.89946 0.89608 0.92175 0.92484 0.85442 0.85150 0.74123 0.92062 0.92536 0.89715 0.88891 0.75654 0.77168 0.86925 0.87890 0.86678 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.60 12.83 -148.98 -1.91 -4.51 16 2 C -0.09 -0.09 2.80 71.24 0.20 0.11 16 3 Si 0.78 -1.73 29.88 68.60 2.05 0.32 16 4 C -0.08 -0.14 5.35 -19.88 -0.11 -0.24 16 5 C -0.16 0.33 8.67 22.28 0.19 0.52 16 6 C -0.07 0.28 10.04 22.25 0.22 0.50 16 7 C -0.20 0.43 9.04 22.36 0.20 0.64 16 8 C 0.12 0.42 6.69 22.50 0.15 0.57 16 9 O -0.34 -1.58 10.14 -92.50 -0.94 -2.51 16 10 C 0.06 -0.25 4.74 71.98 0.34 0.09 16 11 C -0.10 0.23 4.87 30.59 0.15 0.38 16 12 C -0.13 1.26 5.70 29.84 0.17 1.43 16 13 C 0.51 -1.42 7.83 87.66 0.69 -0.73 16 14 O -0.59 -5.44 15.98 -3.05 -0.05 -5.49 16 15 N -0.71 7.10 5.56 -463.05 -2.57 4.52 16 16 C 0.13 -1.06 5.51 86.38 0.48 -0.59 16 17 C -0.10 1.33 3.75 -10.21 -0.04 1.30 16 18 H 0.13 -2.37 8.14 -2.39 -0.02 -2.38 16 19 C -0.14 1.21 7.44 31.12 0.23 1.45 16 20 C 0.10 -0.80 4.95 45.52 0.23 -0.57 16 21 H 0.14 -1.37 8.14 -2.39 -0.02 -1.39 16 22 N -0.27 -0.17 3.53 -324.67 -1.15 -1.31 16 23 C -0.04 0.08 10.78 83.49 0.90 0.98 16 24 C -0.07 -0.22 12.05 83.73 1.01 0.79 16 25 N -0.32 -3.83 12.41 -58.26 -0.72 -4.56 16 26 N -0.13 -1.29 13.17 37.02 0.49 -0.80 16 27 C -0.13 1.78 7.01 31.18 0.22 2.00 16 28 C -0.15 -0.82 9.62 22.37 0.22 -0.61 16 29 H 0.39 -0.52 8.70 -74.06 -0.64 -1.16 16 30 H 0.12 0.03 7.96 -2.39 -0.02 0.02 16 31 H -0.30 -1.75 7.11 99.48 0.71 -1.04 16 32 H -0.28 -0.12 7.01 99.48 0.70 0.58 16 33 H 0.15 -0.88 4.84 -2.91 -0.01 -0.89 16 34 H 0.16 -1.54 8.06 -2.91 -0.02 -1.56 16 35 H 0.15 -1.23 6.30 -2.91 -0.02 -1.24 16 36 H 0.08 -0.67 7.65 -2.39 -0.02 -0.69 16 37 H 0.09 -0.74 7.68 -2.38 -0.02 -0.76 16 38 H 0.06 0.14 8.10 -2.39 -0.02 0.13 16 39 H 0.06 0.17 8.10 -2.39 -0.02 0.15 16 40 H 0.13 -1.95 8.14 -2.39 -0.02 -1.97 16 41 H 0.13 -2.07 8.14 -2.39 -0.02 -2.09 16 42 H 0.42 -7.35 8.47 -92.71 -0.79 -8.14 16 43 H 0.06 -0.33 7.86 -2.39 -0.02 -0.35 16 44 H 0.06 -0.21 8.14 -2.38 -0.02 -0.23 16 45 H 0.08 -0.50 8.10 -2.39 -0.02 -0.52 16 46 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 47 H 0.23 -2.57 6.74 -2.91 -0.02 -2.58 16 48 H 0.21 -0.67 8.06 -2.91 -0.02 -0.69 16 49 H 0.11 -1.95 8.14 -2.39 -0.02 -1.97 16 50 H 0.10 -1.46 6.10 -2.39 -0.01 -1.48 16 51 H 0.12 0.90 8.06 -2.91 -0.02 0.87 16 Total: 0.00 -36.79 422.21 0.21 -36.58 By element: Atomic # 1 Polarization: -29.82 SS G_CDS: -0.43 Total: -30.25 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: 5.45 Total: 8.02 kcal Atomic # 7 Polarization: 1.81 SS G_CDS: -3.96 Total: -2.15 kcal Atomic # 8 Polarization: -9.62 SS G_CDS: -2.90 Total: -12.52 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: 2.05 Total: 0.32 kcal Total: -36.79 0.21 -36.58 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_4549616.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.282 kcal (2) G-P(sol) polarization free energy of solvation -36.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.489 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.581 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.701 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds