Wall clock time and date at job start Sun Mar 7 2021 07:25:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35990 * 117.00101 * 2 1 4 4 C 1.39150 * 120.07304 * 179.97438 * 3 2 1 5 5 O 1.35996 * 120.07491 * 0.02562 * 4 3 2 6 6 C 1.42904 * 117.00103 * 179.72385 * 5 4 3 7 7 C 1.50705 * 109.46855 * 180.02562 * 6 5 4 8 8 O 1.21281 * 120.00071 * 359.97438 * 7 6 5 9 9 N 1.34777 * 119.99937 * 180.02562 * 7 6 5 10 10 C 1.46497 * 120.00242 * 179.97438 * 9 7 6 11 11 C 1.52990 * 109.47171 * 179.97438 * 10 9 7 12 12 H 1.09000 * 112.90908 * 43.75361 * 11 10 9 13 13 C 1.53786 * 113.61464 * 174.99989 * 11 10 9 14 14 C 1.53781 * 87.17350 * 140.02626 * 13 11 10 15 15 H 1.09003 * 113.61462 * 89.16045 * 14 13 11 16 16 N 1.46493 * 113.61552 * 219.97837 * 14 13 11 17 17 C 1.35314 * 125.86772 * 84.71688 * 16 14 13 18 18 C 1.35358 * 106.17467 * 179.90632 * 17 16 14 19 19 N 1.33768 * 106.49440 * 0.35095 * 18 17 16 20 20 N 1.28632 * 108.88679 * 359.77606 * 19 18 17 21 21 C 1.53781 * 87.08070 * 334.52830 * 14 13 11 22 22 C 1.38570 * 119.85639 * 179.72893 * 4 3 2 23 23 C 1.38241 * 119.99709 * 0.27958 * 22 4 3 24 24 N 1.47999 * 119.92650 * 180.02562 * 23 22 4 25 25 O 1.21801 * 120.00439 * 359.97438 * 24 23 22 26 26 O 1.21803 * 120.00206 * 179.97438 * 24 23 22 27 27 C 1.38257 * 120.14751 * 359.97438 * 23 22 4 28 28 C 1.50695 * 119.92810 * 180.02562 * 27 23 22 29 29 O 1.42898 * 109.47484 * 74.99997 * 28 27 23 30 30 Si 1.86300 * 109.47135 * 194.99900 * 28 27 23 31 31 C 1.38250 * 120.14522 * 0.02562 * 27 23 22 32 32 H 1.08995 * 109.47243 * 299.99552 * 1 2 3 33 33 H 1.09002 * 109.47181 * 59.99954 * 1 2 3 34 34 H 1.09001 * 109.47153 * 179.97438 * 1 2 3 35 35 H 1.08994 * 109.47110 * 60.00142 * 6 5 4 36 36 H 1.09000 * 109.46960 * 299.99537 * 6 5 4 37 37 H 0.97003 * 119.99582 * 359.97438 * 9 7 6 38 38 H 1.09007 * 109.46596 * 59.99839 * 10 9 7 39 39 H 1.08994 * 109.47005 * 300.00149 * 10 9 7 40 40 H 1.09002 * 113.61357 * 25.43543 * 13 11 10 41 41 H 1.09002 * 113.61608 * 254.61705 * 13 11 10 42 42 H 1.07995 * 126.91635 * 0.02562 * 17 16 14 43 43 H 1.07997 * 126.75030 * 180.12417 * 18 17 16 44 44 H 1.09005 * 113.61471 * 139.98321 * 21 14 13 45 45 H 1.08996 * 113.61178 * 270.79663 * 21 14 13 46 46 H 1.08000 * 120.00367 * 180.30126 * 22 4 3 47 47 H 1.09003 * 109.47028 * 314.99951 * 28 27 23 48 48 H 0.96699 * 114.00316 * 59.99948 * 29 28 27 49 49 H 1.48501 * 110.00230 * 179.97438 * 30 28 27 50 50 H 1.48497 * 110.00030 * 301.31843 * 30 28 27 51 51 H 1.07994 * 120.00096 * 180.02562 * 31 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2862 0.0005 5 8 4.1795 0.1476 0.0005 6 6 5.6004 0.3006 -0.0050 7 6 6.2519 -1.0584 -0.0048 8 8 5.5669 -2.0592 0.0002 9 7 7.5957 -1.1614 -0.0091 10 6 8.2291 -2.4824 -0.0083 11 6 9.7502 -2.3186 -0.0144 12 1 10.0970 -1.5505 0.6769 13 6 10.5134 -3.6480 0.1088 14 6 11.5032 -3.0879 -0.9264 15 1 12.3291 -2.5309 -0.4840 16 7 11.9473 -4.0789 -1.9096 17 6 11.2963 -4.4137 -3.0476 18 6 12.0546 -5.3581 -3.6520 19 7 13.1144 -5.5578 -2.8607 20 7 13.0212 -4.7848 -1.8368 21 6 10.3542 -2.1964 -1.4262 22 6 4.0604 2.5233 -0.0051 23 6 3.3031 3.6798 -0.0055 24 7 3.9716 5.0001 -0.0122 25 8 5.1878 5.0670 -0.0168 26 8 3.3057 6.0200 -0.0129 27 6 1.9225 3.6057 -0.0007 28 6 1.1018 4.8696 -0.0017 29 8 1.1304 5.4552 -1.3049 30 14 -0.6579 4.4677 0.4599 31 6 1.2932 2.3747 0.0050 32 1 -0.3633 0.5137 0.8900 33 1 -0.3634 0.5138 -0.8900 34 1 -0.3633 -1.0277 -0.0005 35 1 5.9098 0.8524 0.8825 36 1 5.9033 0.8482 -0.8975 37 1 8.1434 -0.3608 -0.0126 38 1 7.9198 -3.0341 -0.8961 39 1 7.9258 -3.0302 0.8839 40 1 9.9495 -4.5099 -0.2480 41 1 10.9547 -3.8087 1.0924 42 1 10.3609 -4.0076 -3.4032 43 1 11.8434 -5.8554 -4.5871 44 1 10.6666 -1.1837 -1.6815 45 1 9.7477 -2.6608 -2.2037 46 1 5.1387 2.5839 -0.0097 47 1 1.5157 5.5722 0.7216 48 1 0.7762 4.8845 -2.0005 49 1 -1.4776 5.7060 0.4631 50 1 -1.2233 3.4863 -0.5004 51 1 0.2147 2.3196 0.0083 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567720_4549636.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:25:12 Heat of formation + Delta-G solvation = 44.008145 kcal Electronic energy + Delta-G solvation = -39689.912999 eV Core-core repulsion = 34179.216693 eV Total energy + Delta-G solvation = -5510.696306 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.161 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -44.25515 -43.28009 -42.17568 -41.32965 -40.53487 -39.65227 -39.28767 -37.63625 -37.18466 -36.07669 -34.16733 -32.78868 -32.66117 -32.00464 -30.87887 -29.19914 -28.58811 -27.91203 -27.38274 -25.94243 -25.30152 -23.94264 -23.63304 -23.23557 -22.45384 -22.01304 -20.87678 -20.77983 -19.77337 -19.63796 -19.17778 -18.77126 -18.52145 -18.32286 -17.94296 -17.72292 -17.55344 -17.50280 -17.15226 -17.09898 -16.66071 -16.53056 -16.26731 -16.15313 -15.88587 -15.77490 -15.33869 -15.15381 -14.93361 -14.75920 -14.59195 -14.06222 -14.01582 -13.91587 -13.85524 -13.58398 -13.46393 -13.22947 -12.98169 -12.77190 -12.66950 -12.63995 -12.59967 -12.31390 -12.24553 -12.20433 -12.09407 -11.97875 -11.74907 -11.67924 -11.17224 -11.01740 -10.72639 -10.60773 -10.45123 -10.34871 -9.59482 -5.22034 -1.26973 -0.56704 0.27727 0.38807 0.59957 0.97220 1.02151 1.25523 1.27335 1.28161 1.65892 1.66682 1.74462 1.81918 2.10157 2.68084 2.81786 2.85687 3.00838 3.08227 3.14134 3.17730 3.24046 3.33776 3.37347 3.49379 3.55993 3.59373 3.64519 3.75133 3.80521 3.82819 3.88292 3.91824 3.98419 4.07065 4.11675 4.16085 4.21272 4.26017 4.29183 4.33558 4.36890 4.43751 4.49993 4.53300 4.62074 4.70606 4.80527 5.01737 5.20808 5.36401 5.43751 5.58721 5.85353 6.06761 6.22157 6.74545 6.84491 7.57385 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.284 6.284 3 C 0.170 3.830 4 C 0.109 3.891 5 O -0.265 6.265 6 C 0.031 3.969 7 C 0.518 3.482 8 O -0.507 6.507 9 N -0.727 5.727 10 C 0.134 3.866 11 C -0.118 4.118 12 H 0.112 0.888 13 C -0.132 4.132 14 C 0.116 3.884 15 H 0.138 0.862 16 N -0.282 5.282 17 C -0.052 4.052 18 C -0.049 4.049 19 N -0.271 5.271 20 N -0.085 5.085 21 C -0.139 4.139 22 C -0.118 4.118 23 C -0.024 4.024 24 N 0.032 4.968 25 O -0.175 6.175 26 O -0.128 6.128 27 C -0.039 4.039 28 C -0.083 4.083 29 O -0.504 6.504 30 Si 0.685 3.315 31 C -0.185 4.185 32 H 0.067 0.933 33 H 0.062 0.938 34 H 0.114 0.886 35 H 0.101 0.899 36 H 0.100 0.900 37 H 0.405 0.595 38 H 0.075 0.925 39 H 0.079 0.921 40 H 0.098 0.902 41 H 0.093 0.907 42 H 0.188 0.812 43 H 0.191 0.809 44 H 0.092 0.908 45 H 0.100 0.900 46 H 0.166 0.834 47 H 0.143 0.857 48 H 0.370 0.630 49 H -0.244 1.244 50 H -0.257 1.257 51 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.742 0.471 2.115 5.214 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.196 6.196 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.177 6.177 6 C -0.047 4.047 7 C 0.302 3.698 8 O -0.380 6.380 9 N -0.381 5.381 10 C 0.011 3.989 11 C -0.138 4.138 12 H 0.131 0.869 13 C -0.171 4.171 14 C 0.014 3.986 15 H 0.155 0.845 16 N -0.075 5.075 17 C -0.203 4.203 18 C -0.206 4.206 19 N -0.137 5.137 20 N -0.064 5.064 21 C -0.178 4.178 22 C -0.138 4.138 23 C -0.108 4.108 24 N 0.551 4.449 25 O -0.385 6.385 26 O -0.349 6.349 27 C -0.041 4.041 28 C -0.192 4.192 29 O -0.308 6.308 30 Si 0.585 3.415 31 C -0.204 4.204 32 H 0.086 0.914 33 H 0.080 0.920 34 H 0.133 0.867 35 H 0.119 0.881 36 H 0.118 0.882 37 H 0.239 0.761 38 H 0.094 0.906 39 H 0.097 0.903 40 H 0.116 0.884 41 H 0.112 0.888 42 H 0.205 0.795 43 H 0.208 0.792 44 H 0.111 0.889 45 H 0.119 0.881 46 H 0.184 0.816 47 H 0.160 0.840 48 H 0.217 0.783 49 H -0.168 1.168 50 H -0.182 1.182 51 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -4.812 -1.159 3.034 5.805 hybrid contribution -0.265 1.281 -1.870 2.282 sum -5.077 0.122 1.164 5.210 Atomic orbital electron populations 1.23399 0.76836 1.05723 1.02068 1.86337 1.22424 1.24288 1.86506 1.18446 0.89029 0.85889 0.94440 1.17844 0.88381 0.85306 1.02282 1.86335 1.16791 1.26088 1.88473 1.22650 0.80320 0.97086 1.04667 1.19848 0.82507 0.90238 0.77213 1.90825 1.62594 1.37861 1.46707 1.45757 1.05846 1.09936 1.76605 1.21350 0.90021 0.84100 1.03478 1.22677 0.94170 0.99287 0.97638 0.86943 1.23422 0.95971 0.97606 1.00107 1.23365 0.97518 0.88680 0.89055 0.84455 1.47499 1.15640 1.27741 1.16669 1.23585 1.03039 1.03388 0.90267 1.23690 0.93307 1.00806 1.02837 1.75167 1.21266 1.17257 0.99993 1.78350 1.04561 1.04541 1.18954 1.23655 0.95336 1.00956 0.97836 1.20793 1.02161 0.88955 1.01848 1.20395 0.91957 0.83163 1.15307 1.43371 1.00970 1.02596 0.97936 1.94539 0.95816 1.93713 1.54463 1.94582 1.64501 1.24061 1.51747 1.20011 0.91530 0.96890 0.95664 1.25417 1.09413 0.94122 0.90296 1.86815 1.84673 1.43930 1.15433 0.95247 0.74256 0.82196 0.89781 1.21116 1.01331 0.89708 1.08278 0.91432 0.91969 0.86727 0.88113 0.88234 0.76070 0.90649 0.90305 0.88390 0.88798 0.79452 0.79229 0.88897 0.88142 0.81634 0.83991 0.78292 1.16803 1.18211 0.81956 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 101.05 0.99 0.94 16 2 O -0.28 0.02 10.28 -34.21 -0.35 -0.33 16 3 C 0.17 -0.10 6.70 -39.12 -0.26 -0.36 16 4 C 0.11 -0.04 6.70 -39.12 -0.26 -0.30 16 5 O -0.27 -0.16 9.45 -47.35 -0.45 -0.61 16 6 C 0.03 -0.10 5.22 36.01 0.19 0.09 16 7 C 0.52 -0.60 7.91 -10.98 -0.09 -0.69 16 8 O -0.51 -2.07 16.50 -14.35 -0.24 -2.30 16 9 N -0.73 3.45 5.56 -60.30 -0.33 3.12 16 10 C 0.13 -0.60 5.52 -4.05 -0.02 -0.62 16 11 C -0.12 0.78 3.76 -89.67 -0.34 0.44 16 12 H 0.11 -0.89 8.14 -51.93 -0.42 -1.31 16 13 C -0.13 0.63 7.43 -25.92 -0.19 0.44 16 14 C 0.12 -0.44 4.96 -67.12 -0.33 -0.78 16 15 H 0.14 -0.63 8.14 -51.93 -0.42 -1.05 16 16 N -0.28 -0.01 3.53 -53.97 -0.19 -0.20 16 17 C -0.05 0.05 10.78 -17.04 -0.18 -0.13 16 18 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 19 N -0.27 -1.35 12.41 30.24 0.38 -0.97 16 20 N -0.08 -0.35 13.16 60.35 0.79 0.45 16 21 C -0.14 0.87 6.99 -25.78 -0.18 0.69 16 22 C -0.12 0.12 8.54 -39.46 -0.34 -0.22 16 23 C -0.02 -0.02 6.85 -79.95 -0.55 -0.56 16 24 N 0.03 0.11 4.45 33.96 0.15 0.26 16 25 O -0.18 -0.69 18.44 -29.46 -0.54 -1.24 16 26 O -0.13 -0.58 14.62 -35.96 -0.53 -1.11 16 27 C -0.04 0.03 5.26 -104.61 -0.55 -0.52 16 28 C -0.08 0.06 1.74 36.00 0.06 0.12 16 29 O -0.50 -0.40 11.80 -55.48 -0.65 -1.06 16 30 Si 0.69 -1.87 30.24 -169.99 -5.14 -7.01 16 31 C -0.19 0.39 7.65 -39.46 -0.30 0.09 16 32 H 0.07 -0.39 7.65 -51.93 -0.40 -0.78 16 33 H 0.06 -0.30 7.67 -51.93 -0.40 -0.70 16 34 H 0.11 -0.58 8.14 -51.93 -0.42 -1.00 16 35 H 0.10 -0.58 7.66 -51.93 -0.40 -0.98 16 36 H 0.10 -0.57 7.66 -51.93 -0.40 -0.97 16 37 H 0.40 -3.19 8.47 -40.82 -0.35 -3.54 16 38 H 0.08 -0.26 7.85 -51.93 -0.41 -0.67 16 39 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 40 H 0.10 -0.37 8.10 -51.93 -0.42 -0.79 16 41 H 0.09 -0.46 8.14 -51.93 -0.42 -0.88 16 42 H 0.19 -0.90 6.73 -52.49 -0.35 -1.25 16 43 H 0.19 -0.34 8.06 -52.49 -0.42 -0.76 16 44 H 0.09 -0.66 8.14 -51.93 -0.42 -1.08 16 45 H 0.10 -0.63 6.09 -51.93 -0.32 -0.94 16 46 H 0.17 -0.52 5.85 -52.49 -0.31 -0.83 16 47 H 0.14 0.00 6.07 -51.93 -0.32 -0.32 16 48 H 0.37 -0.99 8.70 45.56 0.40 -0.60 16 49 H -0.24 -0.17 7.11 56.52 0.40 0.23 16 50 H -0.26 0.58 6.68 56.52 0.38 0.95 16 51 H 0.16 -0.68 3.09 -52.49 -0.16 -0.84 16 LS Contribution 430.62 15.07 6.49 6.49 Total: 0.00 -15.76 430.62 -9.19 -24.95 By element: Atomic # 1 Polarization: -12.79 SS G_CDS: -6.00 Total: -18.79 kcal Atomic # 6 Polarization: 0.92 SS G_CDS: -2.57 Total: -1.64 kcal Atomic # 7 Polarization: 1.85 SS G_CDS: 0.80 Total: 2.64 kcal Atomic # 8 Polarization: -3.88 SS G_CDS: -2.76 Total: -6.64 kcal Atomic # 14 Polarization: -1.87 SS G_CDS: -5.14 Total: -7.01 kcal Total LS contribution 6.49 Total: 6.49 kcal Total: -15.76 -9.19 -24.95 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_4549636.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.960 kcal (2) G-P(sol) polarization free energy of solvation -15.764 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.196 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.952 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.008 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds