Wall clock time and date at job start Sun Mar 7 2021 07:25:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86304 * 109.47220 * 2 1 4 4 C 1.50699 * 109.47254 * 240.00000 * 2 1 3 5 5 C 1.38239 * 119.94375 * 120.00342 * 4 2 1 6 6 C 1.38167 * 120.05707 * 180.02562 * 5 4 2 7 7 C 1.38716 * 119.94123 * 359.97300 * 6 5 4 8 8 O 1.35905 * 120.05249 * 179.97438 * 7 6 5 9 9 C 1.42895 * 117.00157 * 0.02562 * 8 7 6 10 10 C 1.50703 * 109.47126 * 180.02562 * 9 8 7 11 11 O 1.21280 * 119.99668 * 359.97438 * 10 9 8 12 12 N 1.34774 * 120.00231 * 180.02562 * 10 9 8 13 13 C 1.46499 * 120.00234 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47084 * 179.97438 * 13 12 10 15 15 H 1.09000 * 112.90903 * 43.74420 * 14 13 12 16 16 C 1.53784 * 113.61330 * 174.99792 * 14 13 12 17 17 C 1.53787 * 87.07923 * 139.97966 * 16 14 13 18 18 H 1.08998 * 113.61103 * 89.12089 * 17 16 14 19 19 N 1.46499 * 113.61131 * 219.93470 * 17 16 14 20 20 C 1.35311 * 125.86924 * 84.72233 * 19 17 16 21 21 C 1.35354 * 106.17621 * 179.90374 * 20 19 17 22 22 N 1.33768 * 106.49440 * 0.34417 * 21 20 19 23 23 N 1.28636 * 108.88620 * 359.78173 * 22 21 20 24 24 C 1.53778 * 87.08035 * 334.56830 * 17 16 14 25 25 C 1.38748 * 119.88915 * 0.25893 * 7 6 5 26 26 N 1.48004 * 120.02949 * 179.72744 * 25 7 6 27 27 O 1.21801 * 120.00052 * 179.97438 * 26 25 7 28 28 O 1.21803 * 119.99937 * 359.97438 * 26 25 7 29 29 C 1.38121 * 119.94472 * 359.50941 * 25 7 6 30 30 H 0.96705 * 113.99120 * 59.99784 * 1 2 3 31 31 H 1.09005 * 109.46968 * 119.99629 * 2 1 3 32 32 H 1.48488 * 110.00172 * 298.68060 * 3 2 1 33 33 H 1.48502 * 109.99634 * 60.00045 * 3 2 1 34 34 H 1.08007 * 119.97294 * 359.97438 * 5 4 2 35 35 H 1.07997 * 120.03267 * 179.97438 * 6 5 4 36 36 H 1.08993 * 109.47688 * 59.99345 * 9 8 7 37 37 H 1.09007 * 109.46951 * 299.99637 * 9 8 7 38 38 H 0.97005 * 119.99833 * 359.97438 * 12 10 9 39 39 H 1.09004 * 109.47092 * 59.99495 * 13 12 10 40 40 H 1.08995 * 109.46661 * 299.99459 * 13 12 10 41 41 H 1.09004 * 113.61451 * 25.43452 * 16 14 13 42 42 H 1.08994 * 113.61477 * 254.52754 * 16 14 13 43 43 H 1.07996 * 126.90923 * 0.02562 * 20 19 17 44 44 H 1.07994 * 126.74935 * 180.12807 * 21 20 19 45 45 H 1.08999 * 113.61111 * 139.98327 * 24 17 16 46 46 H 1.08999 * 113.61280 * 270.79710 * 24 17 16 47 47 H 1.07998 * 119.97728 * 180.23360 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7261 -0.0375 -2.1396 6 6 3.1876 -0.6864 -3.2688 7 6 2.8531 -2.0144 -3.4894 8 8 3.3054 -2.6547 -4.5996 9 6 4.1214 -1.8994 -5.4971 10 6 4.5249 -2.7677 -6.6608 11 8 4.1508 -3.9200 -6.7159 12 7 5.3023 -2.2640 -7.6398 13 6 5.6950 -3.1082 -8.7708 14 6 6.5687 -2.2994 -9.7317 15 1 7.3182 -1.6969 -9.2187 16 6 7.1365 -3.1297 -10.8950 17 6 6.8542 -1.9155 -11.7957 18 1 7.6819 -1.2081 -11.8470 19 7 6.3293 -2.2736 -13.1158 20 6 5.0314 -2.5121 -13.4149 21 6 4.9963 -2.8029 -14.7364 22 7 6.2588 -2.7365 -15.1736 23 7 7.0242 -2.4207 -14.1892 24 6 5.7656 -1.5180 -10.7850 25 6 2.0513 -2.6861 -2.5778 26 7 1.6876 -4.1013 -2.8133 27 8 0.9841 -4.6907 -2.0125 28 8 2.0919 -4.6767 -3.8079 29 6 1.5966 -2.0344 -1.4482 30 1 -0.3932 0.4418 -0.7651 31 1 1.7923 -0.5138 0.8901 32 1 1.5880 2.4586 -1.2241 33 1 1.5615 2.4678 1.2085 34 1 2.9859 0.9967 -1.9675 35 1 3.8081 -0.1601 -3.9790 36 1 5.0134 -1.5543 -4.9742 37 1 3.5596 -1.0399 -5.8631 38 1 5.6018 -1.3424 -7.5955 39 1 4.8029 -3.4529 -9.2939 40 1 6.2565 -3.9677 -8.4048 41 1 6.5353 -4.0050 -11.1411 42 1 8.1970 -3.3589 -10.7910 43 1 4.1922 -2.4757 -12.7362 44 1 4.1216 -3.0447 -15.3217 45 1 5.7194 -0.4462 -10.5921 46 1 4.7893 -1.9515 -11.0017 47 1 0.9756 -2.5579 -0.7364 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567720_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:25:15 Heat of formation + Delta-G solvation = 62.211984 kcal Electronic energy + Delta-G solvation = -34780.260054 eV Core-core repulsion = 29744.572936 eV Total energy + Delta-G solvation = -5035.687117 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.146 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -44.25424 -43.28103 -41.75948 -40.92756 -40.13975 -39.32153 -37.61538 -37.46873 -35.88957 -34.10136 -33.46926 -32.26060 -32.01103 -30.72106 -28.45026 -27.81165 -26.95723 -26.54386 -25.23009 -23.98564 -23.61831 -22.82559 -22.27631 -21.77361 -20.58460 -20.43033 -19.76326 -19.24517 -18.93586 -18.62675 -18.32316 -18.02973 -17.59030 -17.34715 -17.22675 -16.86416 -16.43463 -16.36503 -16.06852 -16.02215 -15.75413 -15.62494 -15.24051 -14.96637 -14.73097 -14.57357 -14.01530 -13.81704 -13.67053 -13.63816 -13.51054 -13.25219 -13.19120 -12.81261 -12.69796 -12.53974 -12.37962 -12.33320 -12.26372 -12.20164 -11.84822 -11.80956 -11.75490 -11.68246 -11.02663 -10.91871 -10.82282 -10.74656 -10.37189 -10.17183 -9.78059 -4.91088 -1.30296 -0.22636 0.16948 0.36813 0.62927 1.22865 1.27837 1.47233 1.50018 1.59051 1.61278 2.03544 2.06530 2.35028 3.05191 3.12864 3.23524 3.27870 3.36247 3.46592 3.50052 3.58611 3.68913 3.72058 3.73043 3.78532 3.97717 3.99258 4.05609 4.20767 4.25437 4.30399 4.31115 4.40843 4.44075 4.56969 4.60041 4.65541 4.69043 4.74272 4.82122 4.85854 4.88088 4.96875 5.09067 5.18244 5.20738 5.25381 5.39682 5.71940 5.78456 6.42297 6.45501 6.48955 7.20099 7.50833 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.092 4.092 3 Si 0.791 3.209 4 C -0.148 4.148 5 C -0.005 4.005 6 C -0.187 4.187 7 C 0.195 3.805 8 O -0.293 6.293 9 C 0.023 3.977 10 C 0.506 3.494 11 O -0.569 6.569 12 N -0.703 5.703 13 C 0.132 3.868 14 C -0.094 4.094 15 H 0.139 0.861 16 C -0.137 4.137 17 C 0.099 3.901 18 H 0.146 0.854 19 N -0.274 5.274 20 C -0.037 4.037 21 C -0.070 4.070 22 N -0.321 5.321 23 N -0.129 5.129 24 C -0.126 4.126 25 C -0.105 4.105 26 N 0.034 4.966 27 O -0.208 6.208 28 O -0.171 6.171 29 C -0.004 4.004 30 H 0.389 0.611 31 H 0.126 0.874 32 H -0.260 1.260 33 H -0.311 1.311 34 H 0.189 0.811 35 H 0.209 0.791 36 H 0.147 0.853 37 H 0.145 0.855 38 H 0.425 0.575 39 H 0.062 0.938 40 H 0.059 0.941 41 H 0.082 0.918 42 H 0.093 0.907 43 H 0.227 0.773 44 H 0.210 0.790 45 H 0.116 0.884 46 H 0.102 0.898 47 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.117 15.489 4.045 16.806 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.199 4.199 3 Si 0.693 3.307 4 C -0.149 4.149 5 C -0.022 4.022 6 C -0.205 4.205 7 C 0.145 3.855 8 O -0.203 6.203 9 C -0.054 4.054 10 C 0.292 3.708 11 O -0.447 6.447 12 N -0.359 5.359 13 C 0.008 3.992 14 C -0.113 4.113 15 H 0.157 0.843 16 C -0.177 4.177 17 C -0.001 4.001 18 H 0.164 0.836 19 N -0.068 5.068 20 C -0.188 4.188 21 C -0.228 4.228 22 N -0.185 5.185 23 N -0.107 5.107 24 C -0.165 4.165 25 C -0.191 4.191 26 N 0.544 4.456 27 O -0.414 6.414 28 O -0.386 6.386 29 C -0.024 4.024 30 H 0.238 0.762 31 H 0.144 0.856 32 H -0.185 1.185 33 H -0.240 1.240 34 H 0.206 0.794 35 H 0.226 0.774 36 H 0.164 0.836 37 H 0.163 0.837 38 H 0.264 0.736 39 H 0.080 0.920 40 H 0.077 0.923 41 H 0.101 0.899 42 H 0.111 0.889 43 H 0.244 0.756 44 H 0.227 0.773 45 H 0.134 0.866 46 H 0.120 0.880 47 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 6.306 15.640 3.944 17.319 hybrid contribution -2.421 -1.187 -0.143 2.700 sum 3.885 14.454 3.801 15.442 Atomic orbital electron populations 1.86638 1.18557 1.80459 1.50335 1.25534 0.83581 1.13156 0.97617 0.94187 0.89210 0.69840 0.77431 1.20370 1.02180 0.92518 0.99869 1.21730 0.89329 1.01316 0.89806 1.21827 1.06085 0.90333 1.02288 1.18959 0.89520 0.92061 0.84952 1.86472 1.63719 1.39862 1.30253 1.23166 0.98269 0.94509 0.89443 1.20513 0.78675 0.87577 0.84076 1.90869 1.55189 1.20407 1.78244 1.45547 1.51566 1.17009 1.21783 1.21284 0.98223 0.93438 0.86205 1.22513 0.98342 0.97267 0.93188 0.84272 1.23442 1.03813 0.96539 0.93881 1.23853 1.01251 1.00576 0.74397 0.83622 1.47854 1.06196 1.42599 1.10185 1.24167 0.89309 1.06682 0.98687 1.24222 0.96747 1.07019 0.94765 1.75083 1.03380 1.17351 1.22717 1.78245 1.22114 1.20474 0.89886 1.23622 0.97218 1.04034 0.91591 1.20871 1.13435 0.81568 1.03188 1.43921 0.98224 1.04020 0.99442 1.94510 1.36065 1.68406 1.42408 1.94672 1.56372 1.69308 1.18214 1.20835 0.94217 0.94823 0.92489 0.76154 0.85624 1.18528 1.23952 0.79389 0.77397 0.83560 0.83728 0.73589 0.92005 0.92282 0.89933 0.88856 0.75632 0.77294 0.86578 0.88015 0.83412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.33 12.77 -148.98 -1.90 -0.57 16 2 C -0.09 0.70 2.82 71.24 0.20 0.90 16 3 Si 0.79 -9.04 29.78 68.60 2.04 -7.00 16 4 C -0.15 1.10 5.39 -19.85 -0.11 0.99 16 5 C 0.00 0.06 8.66 22.25 0.19 0.26 16 6 C -0.19 2.55 9.04 22.37 0.20 2.75 16 7 C 0.19 -0.39 6.67 22.51 0.15 -0.24 16 8 O -0.29 -0.42 7.68 -63.46 -0.49 -0.91 16 9 C 0.02 -0.26 5.22 71.24 0.37 0.11 16 10 C 0.51 -1.87 7.91 87.66 0.69 -1.18 16 11 O -0.57 -6.37 16.50 16.01 0.26 -6.11 16 12 N -0.70 9.03 5.56 -463.07 -2.57 6.46 16 13 C 0.13 -1.32 5.51 86.38 0.48 -0.84 16 14 C -0.09 1.51 3.75 -10.27 -0.04 1.47 16 15 H 0.14 -2.91 8.14 -2.39 -0.02 -2.93 16 16 C -0.14 1.40 7.44 31.12 0.23 1.63 16 17 C 0.10 -0.93 4.96 45.52 0.23 -0.70 16 18 H 0.15 -1.63 8.14 -2.39 -0.02 -1.65 16 19 N -0.27 0.07 3.53 -324.67 -1.15 -1.08 16 20 C -0.04 0.11 10.78 83.49 0.90 1.01 16 21 C -0.07 -0.20 12.05 83.73 1.01 0.81 16 22 N -0.32 -3.70 12.41 -58.26 -0.72 -4.42 16 23 N -0.13 -1.20 13.16 37.02 0.49 -0.71 16 24 C -0.13 2.04 6.98 31.12 0.22 2.25 16 25 C -0.11 -0.55 6.86 36.47 0.25 -0.30 16 26 N 0.03 0.53 4.45 -46.25 -0.21 0.32 16 27 O -0.21 -3.69 18.45 18.89 0.35 -3.34 16 28 O -0.17 -3.42 17.24 25.60 0.44 -2.98 16 29 C 0.00 0.00 9.12 22.25 0.20 0.20 16 30 H 0.39 -3.44 8.70 -74.05 -0.64 -4.08 16 31 H 0.13 -1.00 7.96 -2.38 -0.02 -1.02 16 32 H -0.26 2.72 7.11 99.48 0.71 3.43 16 33 H -0.31 0.31 7.11 99.48 0.71 1.02 16 34 H 0.19 -4.06 4.87 -2.91 -0.01 -4.08 16 35 H 0.21 -5.07 6.30 -2.91 -0.02 -5.09 16 36 H 0.15 -3.00 7.66 -2.39 -0.02 -3.02 16 37 H 0.15 -2.96 7.66 -2.38 -0.02 -2.98 16 38 H 0.43 -9.43 8.47 -92.70 -0.79 -10.22 16 39 H 0.06 -0.41 7.85 -2.38 -0.02 -0.43 16 40 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 41 H 0.08 -0.54 8.10 -2.39 -0.02 -0.56 16 42 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 43 H 0.23 -2.70 6.74 -2.91 -0.02 -2.72 16 44 H 0.21 -0.68 8.06 -2.91 -0.02 -0.70 16 45 H 0.12 -2.32 8.14 -2.39 -0.02 -2.34 16 46 H 0.10 -1.60 6.09 -2.39 -0.01 -1.61 16 47 H 0.15 0.41 7.61 -2.91 -0.02 0.39 16 Total: 0.00 -52.51 405.70 1.41 -51.10 By element: Atomic # 1 Polarization: -39.53 SS G_CDS: -0.32 Total: -39.85 kcal Atomic # 6 Polarization: 3.93 SS G_CDS: 5.18 Total: 9.10 kcal Atomic # 7 Polarization: 4.72 SS G_CDS: -4.16 Total: 0.56 kcal Atomic # 8 Polarization: -12.58 SS G_CDS: -1.34 Total: -13.91 kcal Atomic # 14 Polarization: -9.04 SS G_CDS: 2.04 Total: -7.00 kcal Total: -52.51 1.41 -51.10 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.312 kcal (2) G-P(sol) polarization free energy of solvation -52.505 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.807 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.100 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds