Wall clock time and date at job start Sun Mar 7 2021 07:25:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35963 * 117.00007 * 2 1 4 4 C 1.39450 * 120.11864 * 180.02562 * 3 2 1 5 5 O 1.34771 * 133.24466 * 359.97423 * 4 3 2 6 6 C 1.34923 * 110.84286 * 179.73366 * 5 4 3 7 7 C 1.46997 * 125.14267 * 180.32365 * 6 5 4 8 8 O 1.21646 * 119.99933 * 180.15193 * 7 6 5 9 9 N 1.34773 * 119.99808 * 0.15084 * 7 6 5 10 10 C 1.46497 * 120.00220 * 180.02562 * 9 7 6 11 11 C 1.53002 * 109.47484 * 179.97438 * 10 9 7 12 12 H 1.08998 * 112.84764 * 43.79482 * 11 10 9 13 13 C 1.53784 * 113.61253 * 174.99750 * 11 10 9 14 14 C 1.53785 * 87.07663 * 139.97859 * 13 11 10 15 15 H 1.08998 * 113.61201 * 89.11856 * 14 13 11 16 16 N 1.46502 * 113.61164 * 220.01381 * 14 13 11 17 17 C 1.35309 * 125.86763 * 85.00479 * 16 14 13 18 18 C 1.35343 * 106.17758 * 179.97438 * 17 16 14 19 19 N 1.33767 * 106.49689 * 359.97438 * 18 17 16 20 20 N 1.28634 * 108.88437 * 359.73913 * 19 18 17 21 21 C 1.53778 * 113.60971 * 272.49527 * 11 10 9 22 22 C 1.35811 * 109.72097 * 0.45396 * 6 5 4 23 23 C 1.40611 * 119.13171 * 179.97438 * 4 3 2 24 24 C 1.39775 * 120.12178 * 0.02562 * 23 4 3 25 25 C 1.50707 * 120.09158 * 179.97438 * 24 23 4 26 26 O 1.42897 * 109.47057 * 284.99698 * 25 24 23 27 27 Si 1.86293 * 109.46957 * 164.99679 * 25 24 23 28 28 C 1.36627 * 119.81600 * 359.97438 * 24 23 4 29 29 C 1.38266 * 120.12093 * 359.97438 * 3 2 1 30 30 H 1.08997 * 109.47174 * 179.97438 * 1 2 3 31 31 H 1.09002 * 109.47097 * 299.99962 * 1 2 3 32 32 H 1.08999 * 109.46956 * 60.00178 * 1 2 3 33 33 H 0.97008 * 119.99980 * 359.97438 * 9 7 6 34 34 H 1.09005 * 109.46829 * 299.99968 * 10 9 7 35 35 H 1.09001 * 109.47228 * 59.99101 * 10 9 7 36 36 H 1.09004 * 113.61099 * 254.52307 * 13 11 10 37 37 H 1.08995 * 113.61361 * 25.34649 * 13 11 10 38 38 H 1.08005 * 126.91283 * 0.02562 * 17 16 14 39 39 H 1.07998 * 126.75405 * 180.02562 * 18 17 16 40 40 H 1.09004 * 113.61727 * 334.55997 * 21 11 10 41 41 H 1.08996 * 113.61525 * 105.47030 * 21 11 10 42 42 H 1.08002 * 126.96056 * 179.83705 * 22 6 5 43 43 H 1.09005 * 109.47028 * 44.99357 * 25 24 23 44 44 H 0.96706 * 113.99845 * 300.00501 * 26 25 24 45 45 H 1.48501 * 109.99924 * 179.97438 * 27 25 24 46 46 H 1.48504 * 110.00315 * 301.31336 * 27 25 24 47 47 H 1.07992 * 119.75484 * 180.02562 * 28 24 23 48 48 H 1.08001 * 119.65891 * 0.02562 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4388 1.2873 -0.0005 5 8 4.4141 0.3573 -0.0007 6 6 5.6317 0.9385 -0.0071 7 6 6.9131 0.2183 -0.0159 8 8 7.9595 0.8387 -0.0185 9 7 6.9286 -1.1293 -0.0211 10 6 8.2057 -1.8472 -0.0293 11 6 7.9434 -3.3545 -0.0332 12 1 7.1535 -3.6449 -0.7258 13 6 9.2203 -4.2015 -0.1647 14 6 8.5975 -5.1579 0.8661 15 1 7.9860 -5.9423 0.4203 16 7 9.5584 -5.6714 1.8456 17 6 9.9324 -5.0523 2.9891 18 6 10.8284 -5.8722 3.5862 19 7 10.9567 -6.9391 2.7896 20 7 10.1867 -6.7922 1.7697 21 6 7.7838 -3.9556 1.3732 22 6 5.4945 2.2897 -0.0014 23 6 4.0555 2.5510 -0.0011 24 6 3.2766 3.7116 -0.0005 25 6 3.9383 5.0656 -0.0005 26 8 4.4611 5.3403 1.3007 27 14 2.6864 6.3685 -0.4544 28 6 1.9137 3.6151 0.0000 29 6 1.2957 2.3726 -0.0005 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 6.0942 -1.6240 -0.0186 34 1 8.7703 -1.5739 -0.9207 35 1 8.7781 -1.5805 0.8592 36 1 9.3492 -4.6467 -1.1513 37 1 10.1178 -3.6967 0.1925 38 1 9.5850 -4.0964 3.3528 39 1 11.3388 -5.6996 4.5222 40 1 8.2886 -3.3841 2.1522 41 1 6.7532 -4.2022 1.6282 42 1 6.2875 3.0229 -0.0019 43 1 4.7505 5.0731 -0.7275 44 1 3.7926 5.3493 1.9994 45 1 3.3263 7.7085 -0.4574 46 1 2.1119 6.0766 -1.7924 47 1 1.3129 4.5125 0.0000 48 1 0.2174 2.3120 -0.0005 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567720_6672420.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:25:57 Heat of formation + Delta-G solvation = 66.287894 kcal Electronic energy + Delta-G solvation = -34319.608081 eV Core-core repulsion = 29539.979670 eV Total energy + Delta-G solvation = -4779.628410 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.152 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -44.27259 -43.77232 -41.18070 -40.59076 -40.02036 -39.06927 -37.00236 -36.10454 -34.13478 -33.66796 -32.03210 -31.96435 -31.20346 -29.47788 -28.37392 -27.01141 -26.33210 -25.75356 -24.35589 -24.00157 -23.63039 -22.32811 -22.03274 -21.77311 -20.68494 -19.75347 -19.05962 -18.82819 -18.39147 -17.85369 -17.73628 -17.38926 -17.26094 -16.90664 -16.71846 -16.46347 -16.21955 -16.09384 -15.84320 -15.74712 -15.65008 -15.12159 -14.69982 -14.56286 -14.54593 -14.46869 -14.17228 -13.68395 -13.59333 -13.56803 -13.41787 -13.30219 -13.26243 -12.84697 -12.58795 -12.40964 -12.28790 -12.09113 -11.93766 -11.91114 -11.87772 -11.79263 -11.52546 -11.03631 -10.98194 -10.44855 -10.39762 -10.38146 -9.83547 -9.00846 -5.00561 -0.69166 0.09708 0.59284 0.61533 1.14514 1.30094 1.42392 1.58287 1.67744 1.85926 1.87482 2.00260 2.13792 2.39573 2.98897 3.15846 3.20562 3.40570 3.49089 3.53598 3.62436 3.65781 3.68722 3.80913 3.86617 3.91236 3.99279 4.17146 4.17764 4.20835 4.26476 4.34410 4.39480 4.40884 4.44146 4.45415 4.55540 4.63059 4.64879 4.76369 4.78564 4.81414 4.81899 4.86200 4.92052 5.02886 5.04377 5.19490 5.21839 5.26530 5.34690 5.56354 5.69076 6.16276 6.27937 6.78614 6.78733 7.49618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.332 6.332 3 C 0.137 3.863 4 C 0.021 3.979 5 O -0.178 6.178 6 C -0.031 4.031 7 C 0.602 3.398 8 O -0.547 6.547 9 N -0.699 5.699 10 C 0.129 3.871 11 C -0.102 4.102 12 H 0.130 0.870 13 C -0.129 4.129 14 C 0.103 3.897 15 H 0.144 0.856 16 N -0.275 5.275 17 C -0.037 4.037 18 C -0.068 4.068 19 N -0.319 5.319 20 N -0.128 5.128 21 C -0.130 4.130 22 C -0.118 4.118 23 C -0.099 4.099 24 C -0.109 4.109 25 C -0.079 4.079 26 O -0.555 6.555 27 Si 0.794 3.206 28 C -0.079 4.079 29 C -0.166 4.166 30 H 0.115 0.885 31 H 0.077 0.923 32 H 0.074 0.926 33 H 0.420 0.580 34 H 0.073 0.927 35 H 0.077 0.923 36 H 0.095 0.905 37 H 0.090 0.910 38 H 0.227 0.773 39 H 0.212 0.788 40 H 0.107 0.893 41 H 0.107 0.893 42 H 0.168 0.832 43 H 0.097 0.903 44 H 0.396 0.604 45 H -0.302 1.302 46 H -0.280 1.280 47 H 0.175 0.825 48 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.624 3.834 1.148 13.243 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.246 6.246 3 C 0.091 3.909 4 C -0.027 4.027 5 O -0.080 6.080 6 C -0.082 4.082 7 C 0.387 3.613 8 O -0.426 6.426 9 N -0.350 5.350 10 C 0.006 3.994 11 C -0.121 4.121 12 H 0.148 0.852 13 C -0.169 4.169 14 C 0.002 3.998 15 H 0.162 0.838 16 N -0.069 5.069 17 C -0.189 4.189 18 C -0.226 4.226 19 N -0.184 5.184 20 N -0.107 5.107 21 C -0.168 4.168 22 C -0.139 4.139 23 C -0.100 4.100 24 C -0.110 4.110 25 C -0.188 4.188 26 O -0.363 6.363 27 Si 0.699 3.301 28 C -0.096 4.096 29 C -0.184 4.184 30 H 0.133 0.867 31 H 0.096 0.904 32 H 0.092 0.908 33 H 0.257 0.743 34 H 0.091 0.909 35 H 0.095 0.905 36 H 0.114 0.886 37 H 0.109 0.891 38 H 0.243 0.757 39 H 0.229 0.771 40 H 0.125 0.875 41 H 0.125 0.875 42 H 0.185 0.815 43 H 0.115 0.885 44 H 0.246 0.754 45 H -0.230 1.230 46 H -0.207 1.207 47 H 0.191 0.809 48 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges -11.269 3.043 -0.600 11.688 hybrid contribution 0.362 0.324 0.307 0.575 sum -10.907 3.367 -0.292 11.419 Atomic orbital electron populations 1.23491 0.75294 1.06016 1.03212 1.86141 1.24307 1.25760 1.88434 1.17986 0.86054 0.86922 0.99936 1.19190 0.88271 0.87013 1.08221 1.83998 1.12605 1.34917 1.76496 1.21944 0.84150 0.92623 1.09443 1.16625 0.84815 0.82904 0.76956 1.90908 1.31451 1.68391 1.51891 1.45798 1.11628 1.04688 1.72905 1.21518 0.84380 0.90246 1.03252 1.22526 0.99323 0.91923 0.98336 0.85232 1.23403 0.98094 0.95431 0.99940 1.23770 0.89691 0.97086 0.89243 0.83838 1.47819 1.29076 1.12905 1.17069 1.24179 1.01960 1.03763 0.88961 1.24226 1.02661 0.92111 1.03582 1.75081 1.17494 1.24524 1.01283 1.78253 1.08291 1.04334 1.19818 1.23638 1.02159 0.93157 0.97869 1.22846 0.95412 0.94618 1.01011 1.19598 0.92348 0.92980 1.05101 1.19675 0.93789 0.93930 1.03586 1.25333 1.05761 0.98638 0.89055 1.86505 1.39667 1.93365 1.16741 0.93860 0.80394 0.73183 0.82709 1.20789 0.92439 0.98640 0.97755 1.21430 1.01977 0.89567 1.05465 0.86691 0.90431 0.90775 0.74299 0.90865 0.90501 0.88609 0.89107 0.75658 0.77126 0.87477 0.87471 0.81487 0.88547 0.75421 1.22987 1.20705 0.80850 0.79994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.12 9.81 113.37 1.11 0.99 16 2 O -0.33 -0.02 10.50 -93.13 -0.98 -0.99 16 3 C 0.14 0.11 6.70 22.57 0.15 0.26 16 4 C 0.02 0.11 7.35 23.14 0.17 0.28 16 5 O -0.18 -0.99 10.28 -13.30 -0.14 -1.13 16 6 C -0.03 -0.19 7.07 24.00 0.17 -0.02 16 7 C 0.60 3.04 7.80 86.54 0.67 3.71 16 8 O -0.55 -6.48 16.83 -4.18 -0.07 -6.55 16 9 N -0.70 2.13 5.55 -466.79 -2.59 -0.46 16 10 C 0.13 -0.77 5.51 86.38 0.48 -0.29 16 11 C -0.10 1.14 3.76 -10.27 -0.04 1.10 16 12 H 0.13 -1.82 8.14 -2.39 -0.02 -1.84 16 13 C -0.13 1.04 7.44 31.12 0.23 1.27 16 14 C 0.10 -0.66 4.96 45.52 0.23 -0.43 16 15 H 0.14 -1.11 8.14 -2.39 -0.02 -1.13 16 16 N -0.27 -0.44 3.53 -324.66 -1.15 -1.58 16 17 C -0.04 0.05 10.77 83.49 0.90 0.95 16 18 C -0.07 -0.26 12.05 83.73 1.01 0.75 16 19 N -0.32 -3.99 12.41 -58.26 -0.72 -4.71 16 20 N -0.13 -1.38 13.16 37.02 0.49 -0.89 16 21 C -0.13 1.49 6.98 31.12 0.22 1.71 16 22 C -0.12 -0.82 10.68 23.79 0.25 -0.56 16 23 C -0.10 -0.49 6.16 -20.24 -0.12 -0.61 16 24 C -0.11 0.01 5.26 -19.87 -0.10 -0.09 16 25 C -0.08 0.05 2.70 71.24 0.19 0.24 16 26 O -0.55 -0.20 12.88 -148.98 -1.92 -2.11 16 27 Si 0.79 -3.65 29.92 68.60 2.05 -1.59 16 28 C -0.08 0.45 8.62 22.02 0.19 0.64 16 29 C -0.17 0.91 9.03 22.40 0.20 1.12 16 30 H 0.11 -1.30 8.14 -2.39 -0.02 -1.32 16 31 H 0.08 -0.95 7.66 -2.39 -0.02 -0.97 16 32 H 0.07 -0.87 7.66 -2.39 -0.02 -0.89 16 33 H 0.42 -2.95 8.19 -92.70 -0.76 -3.71 16 34 H 0.07 -0.27 8.14 -2.38 -0.02 -0.29 16 35 H 0.08 -0.39 7.84 -2.39 -0.02 -0.41 16 36 H 0.10 -0.78 8.14 -2.38 -0.02 -0.80 16 37 H 0.09 -0.54 8.10 -2.39 -0.02 -0.56 16 38 H 0.23 -2.35 6.73 -2.91 -0.02 -2.37 16 39 H 0.21 -0.55 8.06 -2.91 -0.02 -0.57 16 40 H 0.11 -1.32 6.08 -2.38 -0.01 -1.33 16 41 H 0.11 -1.44 8.14 -2.39 -0.02 -1.46 16 42 H 0.17 1.17 8.06 -2.91 -0.02 1.15 16 43 H 0.10 0.21 7.96 -2.38 -0.02 0.19 16 44 H 0.40 -3.41 8.70 -74.05 -0.64 -4.06 16 45 H -0.30 -1.13 7.11 99.48 0.71 -0.42 16 46 H -0.28 0.07 7.11 99.48 0.71 0.78 16 47 H 0.17 -2.25 5.07 -2.91 -0.01 -2.27 16 48 H 0.18 -2.33 6.26 -2.91 -0.02 -2.35 16 Total: 0.00 -34.22 407.16 0.57 -33.65 By element: Atomic # 1 Polarization: -24.32 SS G_CDS: -0.31 Total: -24.63 kcal Atomic # 6 Polarization: 5.10 SS G_CDS: 5.91 Total: 11.01 kcal Atomic # 7 Polarization: -3.67 SS G_CDS: -3.97 Total: -7.65 kcal Atomic # 8 Polarization: -7.68 SS G_CDS: -3.10 Total: -10.79 kcal Atomic # 14 Polarization: -3.65 SS G_CDS: 2.05 Total: -1.59 kcal Total: -34.22 0.57 -33.65 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_6672420.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.937 kcal (2) G-P(sol) polarization free energy of solvation -34.218 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.649 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.288 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds