Wall clock time and date at job start Sun Mar 7 2021 07:26:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86293 * 109.47308 * 2 1 4 4 C 1.50703 * 109.46715 * 240.00311 * 2 1 3 5 5 C 1.34236 * 126.50163 * 105.02726 * 4 2 1 6 6 N 1.36837 * 109.93711 * 180.22767 * 5 4 2 7 7 C 1.46495 * 125.05897 * 179.72930 * 6 5 4 8 8 C 1.50702 * 109.47463 * 265.02477 * 7 6 5 9 9 O 1.21281 * 119.99863 * 0.02562 * 8 7 6 10 10 N 1.34775 * 119.99997 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99950 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46810 * 180.02562 * 11 10 8 13 13 H 1.08997 * 112.84817 * 314.66263 * 12 11 10 14 14 C 1.53773 * 113.61620 * 85.86731 * 12 11 10 15 15 C 1.53956 * 87.02510 * 139.94788 * 14 12 11 16 16 H 1.09006 * 113.53612 * 89.18214 * 15 14 12 17 17 N 1.46497 * 113.67159 * 220.06713 * 15 14 12 18 18 C 1.35319 * 125.86395 * 12.26716 * 17 15 14 19 19 C 1.35350 * 106.17188 * 179.90705 * 18 17 15 20 20 N 1.33769 * 106.49685 * 0.35223 * 19 18 17 21 21 N 1.28634 * 108.88575 * 359.77588 * 20 19 18 22 22 C 1.53787 * 113.60889 * 183.47249 * 12 11 10 23 23 C 1.37689 * 109.87393 * 359.55777 * 6 5 4 24 24 C 1.39087 * 133.51282 * 180.09798 * 23 6 5 25 25 C 1.37788 * 119.77795 * 180.36513 * 24 23 6 26 26 C 1.38784 * 120.66934 * 359.97438 * 25 24 23 27 27 C 1.36667 * 120.52601 * 0.02562 * 26 25 24 28 28 C 1.39587 * 119.76286 * 359.97438 * 27 26 25 29 29 H 0.96702 * 114.00644 * 59.99353 * 1 2 3 30 30 H 1.08996 * 109.47026 * 120.00744 * 2 1 3 31 31 H 1.48503 * 109.99708 * 60.00337 * 3 2 1 32 32 H 1.48497 * 110.00270 * 181.31986 * 3 2 1 33 33 H 1.08002 * 125.02686 * 359.95835 * 5 4 2 34 34 H 1.09004 * 109.47318 * 25.02832 * 7 6 5 35 35 H 1.09004 * 109.47068 * 145.02521 * 7 6 5 36 36 H 0.97005 * 119.99829 * 0.02562 * 10 8 7 37 37 H 1.09000 * 109.46835 * 299.99883 * 11 10 8 38 38 H 1.08993 * 109.46921 * 60.00580 * 11 10 8 39 39 H 1.09004 * 113.61262 * 254.52191 * 14 12 11 40 40 H 1.08998 * 113.61625 * 25.42661 * 14 12 11 41 41 H 1.07998 * 126.91048 * 0.02562 * 18 17 15 42 42 H 1.07994 * 126.74795 * 180.13015 * 19 18 17 43 43 H 1.08991 * 113.61462 * 334.56335 * 22 12 11 44 44 H 1.08997 * 113.61343 * 105.38835 * 22 12 11 45 45 H 1.08000 * 120.10849 * 0.33823 * 24 23 6 46 46 H 1.08005 * 119.66558 * 180.02562 * 25 24 23 47 47 H 1.08000 * 119.73904 * 180.02562 * 26 25 24 48 48 H 1.08000 * 120.11550 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2306 5 6 2.4611 -0.1376 -2.3228 6 7 2.7982 -1.0987 -3.2367 7 6 3.3967 -0.8395 -4.5485 8 6 2.3120 -0.7813 -5.5930 9 8 1.1530 -0.9401 -5.2731 10 7 2.6298 -0.5517 -6.8825 11 6 1.5752 -0.4945 -7.8978 12 6 2.2005 -0.2240 -9.2678 13 1 2.9481 0.5688 -9.2427 14 6 2.6750 -1.4957 -9.9903 15 6 2.1271 -0.8679 -11.2849 16 1 2.8557 -0.2520 -11.8122 17 7 1.4490 -1.8257 -12.1618 18 6 1.0789 -3.0834 -11.8265 19 6 0.4884 -3.6083 -12.9255 20 7 0.5326 -2.6614 -13.8693 21 7 1.1078 -1.6176 -13.3853 22 6 1.1672 -0.0608 -10.3950 23 6 2.4946 -2.3457 -2.7381 24 6 2.6296 -3.6362 -3.2390 25 6 2.2153 -4.7107 -2.4825 26 6 1.6639 -4.5194 -1.2234 27 6 1.5220 -3.2600 -0.7118 28 6 1.9351 -2.1571 -1.4610 29 1 -0.3934 0.4418 -0.7650 30 1 1.7923 -0.5139 0.8899 31 1 1.5616 2.4677 1.2086 32 1 3.5346 1.7702 -0.0321 33 1 2.5969 0.9248 -2.4617 34 1 3.9287 0.1116 -4.5237 35 1 4.0948 -1.6400 -4.7939 36 1 3.5568 -0.4243 -7.1382 37 1 1.0432 -1.4455 -7.9230 38 1 0.8774 0.3059 -7.6521 39 1 3.7578 -1.6205 -9.9888 40 1 2.1437 -2.3965 -9.6831 41 1 1.2237 -3.5696 -10.8731 42 1 0.0679 -4.5982 -13.0224 43 1 0.2229 -0.5685 -10.1986 44 1 1.0335 0.9714 -10.7187 45 1 3.0575 -3.7954 -4.2178 46 1 2.3214 -5.7120 -2.8731 47 1 1.3445 -5.3724 -0.6431 48 1 1.0917 -3.1188 0.2687 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567720_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:26:19 Heat of formation + Delta-G solvation = 134.596588 kcal Electronic energy + Delta-G solvation = -32012.806470 eV Core-core repulsion = 27652.541002 eV Total energy + Delta-G solvation = -4360.265469 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -44.26003 -42.50536 -40.90280 -39.96898 -38.09274 -37.61104 -35.85004 -34.20147 -33.91892 -32.01891 -31.55319 -30.23195 -29.84778 -28.25034 -26.96783 -25.89164 -24.99288 -23.70891 -23.62126 -22.69909 -22.25526 -21.66746 -20.70942 -20.43907 -19.03934 -18.46945 -18.14504 -17.72430 -17.38403 -17.25507 -16.85926 -16.53834 -16.39759 -16.19947 -15.95740 -15.84875 -15.44535 -15.36162 -15.10018 -14.83715 -14.72388 -14.54140 -14.32573 -14.04808 -13.65138 -13.63963 -13.52149 -13.31280 -13.07388 -12.80745 -12.71735 -12.56315 -12.51418 -12.23462 -12.10834 -11.84817 -11.80283 -11.76408 -11.69209 -11.10322 -10.94966 -10.53573 -10.37845 -10.29677 -10.13260 -9.14725 -8.61155 -4.99596 0.15071 0.62271 0.64008 1.37418 1.41286 1.47569 1.53523 1.58556 1.69822 1.73250 2.01194 2.25508 2.94844 3.04810 3.24102 3.48564 3.58017 3.60699 3.68096 3.71052 3.72089 3.82201 3.90563 3.99326 4.07190 4.20006 4.20748 4.22796 4.24856 4.30137 4.31568 4.43668 4.48342 4.56707 4.58896 4.68647 4.72566 4.74366 4.79677 4.81441 4.86940 4.89473 4.96523 5.14036 5.18788 5.25669 5.42045 5.50840 5.66378 5.71154 5.73828 5.76042 6.21350 6.26222 6.53812 6.82832 7.21148 7.50306 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.048 4.048 3 Si 0.796 3.204 4 C -0.227 4.227 5 C 0.081 3.919 6 N -0.466 5.466 7 C 0.086 3.914 8 C 0.491 3.509 9 O -0.572 6.572 10 N -0.708 5.708 11 C 0.134 3.866 12 C -0.095 4.095 13 H 0.137 0.863 14 C -0.127 4.127 15 C 0.099 3.901 16 H 0.145 0.855 17 N -0.274 5.274 18 C -0.037 4.037 19 C -0.069 4.069 20 N -0.320 5.320 21 N -0.129 5.129 22 C -0.135 4.135 23 C 0.091 3.909 24 C -0.131 4.131 25 C -0.109 4.109 26 C -0.155 4.155 27 C -0.093 4.093 28 C -0.119 4.119 29 H 0.390 0.610 30 H 0.090 0.910 31 H -0.303 1.303 32 H -0.273 1.273 33 H 0.210 0.790 34 H 0.166 0.834 35 H 0.143 0.857 36 H 0.423 0.577 37 H 0.058 0.942 38 H 0.061 0.939 39 H 0.113 0.887 40 H 0.101 0.899 41 H 0.227 0.773 42 H 0.211 0.789 43 H 0.082 0.918 44 H 0.093 0.907 45 H 0.137 0.863 46 H 0.146 0.854 47 H 0.133 0.867 48 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.448 3.106 -1.024 9.059 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.157 4.157 3 Si 0.700 3.300 4 C -0.235 4.235 5 C -0.044 4.044 6 N -0.149 5.149 7 C -0.038 4.038 8 C 0.277 3.723 9 O -0.450 6.450 10 N -0.362 5.362 11 C 0.010 3.990 12 C -0.114 4.114 13 H 0.154 0.846 14 C -0.165 4.165 15 C -0.001 4.001 16 H 0.162 0.838 17 N -0.068 5.068 18 C -0.188 4.188 19 C -0.227 4.227 20 N -0.185 5.185 21 N -0.107 5.107 22 C -0.175 4.175 23 C -0.014 4.014 24 C -0.151 4.151 25 C -0.128 4.128 26 C -0.174 4.174 27 C -0.112 4.112 28 C -0.123 4.123 29 H 0.240 0.760 30 H 0.108 0.892 31 H -0.231 1.231 32 H -0.200 1.200 33 H 0.226 0.774 34 H 0.183 0.817 35 H 0.161 0.839 36 H 0.261 0.739 37 H 0.076 0.924 38 H 0.079 0.921 39 H 0.132 0.868 40 H 0.120 0.880 41 H 0.243 0.757 42 H 0.227 0.773 43 H 0.101 0.899 44 H 0.112 0.888 45 H 0.155 0.845 46 H 0.164 0.836 47 H 0.151 0.849 48 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 8.332 4.392 -1.353 9.515 hybrid contribution -0.152 -1.632 1.004 1.922 sum 8.180 2.760 -0.349 8.640 Atomic orbital electron populations 1.86443 1.18361 1.82423 1.50011 1.24703 0.84362 1.11051 0.95555 0.94004 0.77444 0.73420 0.85132 1.20799 1.11628 0.91917 0.99135 1.22078 0.98984 0.95317 0.88058 1.43446 1.53479 1.03634 1.14299 1.22021 0.93945 1.09235 0.78627 1.21367 0.90342 0.76176 0.84443 1.90825 1.22557 1.50071 1.81579 1.45739 1.12017 1.72531 1.05933 1.21228 0.90092 1.01574 0.86070 1.22512 0.98660 0.99192 0.91073 0.84555 1.23642 1.04293 0.98524 0.90048 1.23884 0.96588 0.91033 0.88636 0.83776 1.47851 1.37371 1.12115 1.09508 1.24161 1.04149 0.86476 1.04036 1.24224 1.05708 1.02370 0.90429 1.75084 1.16388 0.98777 1.28250 1.78245 1.16580 1.21159 0.94751 1.23416 0.97894 1.01843 0.94303 1.18385 1.01770 0.87177 0.94091 1.20260 1.04804 0.88987 1.01088 1.21130 0.98309 0.99177 0.94223 1.20906 1.02434 0.96901 0.97164 1.20434 0.99297 0.91954 0.99471 1.19384 1.03777 0.93914 0.95255 0.76028 0.89232 1.23125 1.19962 0.77408 0.81673 0.83935 0.73930 0.92357 0.92104 0.86841 0.88027 0.75662 0.77265 0.89893 0.88824 0.84495 0.83645 0.84861 0.86877 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.27 12.88 -148.98 -1.92 -5.19 16 2 C -0.05 -0.17 3.06 71.24 0.22 0.05 16 3 Si 0.80 -1.81 30.75 68.60 2.11 0.30 16 4 C -0.23 -1.02 5.58 -18.62 -0.10 -1.13 16 5 C 0.08 -0.12 9.89 83.00 0.82 0.70 16 6 N -0.47 0.56 2.27 -519.99 -1.18 -0.62 16 7 C 0.09 -0.97 6.48 85.63 0.55 -0.42 16 8 C 0.49 -3.07 7.90 87.66 0.69 -2.38 16 9 O -0.57 -3.55 16.43 -3.03 -0.05 -3.60 16 10 N -0.71 9.71 5.56 -463.06 -2.57 7.14 16 11 C 0.13 -1.49 5.50 86.38 0.48 -1.02 16 12 C -0.10 1.55 3.75 -10.27 -0.04 1.51 16 13 H 0.14 -2.80 8.14 -2.39 -0.02 -2.82 16 14 C -0.13 2.02 6.99 31.18 0.22 2.23 16 15 C 0.10 -0.92 4.96 45.58 0.23 -0.69 16 16 H 0.14 -1.57 8.14 -2.38 -0.02 -1.59 16 17 N -0.27 0.09 3.53 -324.37 -1.15 -1.06 16 18 C -0.04 0.11 10.78 83.49 0.90 1.01 16 19 C -0.07 -0.18 12.05 83.73 1.01 0.83 16 20 N -0.32 -3.64 12.41 -58.26 -0.72 -4.36 16 21 N -0.13 -1.19 13.16 37.02 0.49 -0.70 16 22 C -0.14 1.44 7.44 31.13 0.23 1.67 16 23 C 0.09 0.49 6.81 39.03 0.27 0.75 16 24 C -0.13 -0.42 10.00 22.37 0.22 -0.19 16 25 C -0.11 -0.40 10.01 22.29 0.22 -0.18 16 26 C -0.16 -0.98 9.97 22.03 0.22 -0.76 16 27 C -0.09 -0.89 10.05 22.23 0.22 -0.66 16 28 C -0.12 -1.08 6.35 -20.20 -0.13 -1.21 16 29 H 0.39 -0.72 8.70 -74.06 -0.64 -1.36 16 30 H 0.09 0.56 7.96 -2.39 -0.02 0.54 16 31 H -0.30 -1.75 7.11 99.48 0.71 -1.04 16 32 H -0.27 -0.18 7.11 99.48 0.71 0.52 16 33 H 0.21 -2.21 6.35 -2.91 -0.02 -2.23 16 34 H 0.17 -3.26 8.12 -2.38 -0.02 -3.28 16 35 H 0.14 -2.30 8.14 -2.38 -0.02 -2.32 16 36 H 0.42 -9.07 8.47 -92.70 -0.79 -9.85 16 37 H 0.06 -0.43 7.87 -2.39 -0.02 -0.45 16 38 H 0.06 -0.43 8.14 -2.39 -0.02 -0.45 16 39 H 0.11 -2.18 8.14 -2.38 -0.02 -2.20 16 40 H 0.10 -1.59 6.11 -2.39 -0.01 -1.61 16 41 H 0.23 -2.75 6.74 -2.91 -0.02 -2.77 16 42 H 0.21 -0.74 8.06 -2.91 -0.02 -0.76 16 43 H 0.08 -0.60 8.10 -2.39 -0.02 -0.62 16 44 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 45 H 0.14 -0.36 8.06 -2.91 -0.02 -0.38 16 46 H 0.15 -0.23 8.06 -2.91 -0.02 -0.26 16 47 H 0.13 0.34 8.06 -2.91 -0.02 0.32 16 48 H 0.11 1.05 8.06 -2.91 -0.02 1.03 16 Total: 0.00 -41.42 406.32 0.86 -40.56 By element: Atomic # 1 Polarization: -32.19 SS G_CDS: -0.38 Total: -32.57 kcal Atomic # 6 Polarization: -6.13 SS G_CDS: 6.23 Total: 0.10 kcal Atomic # 7 Polarization: 5.53 SS G_CDS: -5.13 Total: 0.40 kcal Atomic # 8 Polarization: -6.82 SS G_CDS: -1.97 Total: -8.79 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: 2.11 Total: 0.30 kcal Total: -41.42 0.86 -40.56 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 175.153 kcal (2) G-P(sol) polarization free energy of solvation -41.417 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 133.737 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.860 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.557 kcal (6) G-S(sol) free energy of system = (1) + (5) 134.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds