Wall clock time and date at job start Sun Mar 7 2021 07:26:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35651 * 116.99955 * 2 1 4 4 C 1.38411 * 120.12381 * 0.27633 * 3 2 1 5 5 C 1.38721 * 120.03436 * 180.25451 * 4 3 2 6 6 O 1.35713 * 119.86686 * 179.76431 * 5 4 3 7 7 C 1.42909 * 116.99660 * 359.97438 * 6 5 4 8 8 C 1.39143 * 120.27630 * 359.74411 * 5 4 3 9 9 C 1.50692 * 119.88234 * 179.97438 * 8 5 4 10 10 O 1.42896 * 109.47337 * 284.97558 * 9 8 5 11 11 Si 1.86306 * 109.47064 * 164.97798 * 9 8 5 12 12 C 1.37587 * 120.23865 * 359.97438 * 8 5 4 13 13 C 1.39818 * 119.96208 * 0.02562 * 12 8 5 14 14 C 1.47307 * 120.13490 * 179.97438 * 13 12 8 15 15 O 1.21624 * 120.00231 * 179.97438 * 14 13 12 16 16 N 1.34775 * 119.99899 * 0.02562 * 14 13 12 17 17 C 1.46506 * 119.99953 * 179.97438 * 16 14 13 18 18 C 1.52994 * 109.46900 * 180.02562 * 17 16 14 19 19 H 1.09000 * 112.90982 * 316.24990 * 18 17 16 20 20 C 1.53775 * 113.61659 * 87.50536 * 18 17 16 21 21 C 1.53786 * 87.08460 * 139.97890 * 20 18 17 22 22 H 1.08997 * 113.68832 * 89.12261 * 21 20 18 23 23 N 1.46499 * 113.61516 * 220.02069 * 21 20 18 24 24 C 1.34430 * 126.82421 * 12.50838 * 23 21 20 25 25 N 1.30832 * 108.07308 * 179.72086 * 24 23 21 26 26 C 1.33234 * 109.83313 * 0.40801 * 25 24 23 27 27 N 1.30720 * 108.94479 * 359.58957 * 26 25 24 28 28 C 1.53783 * 87.07818 * 334.56885 * 21 20 18 29 29 H 1.09003 * 109.46927 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47059 * 299.99860 * 1 2 3 31 31 H 1.09000 * 109.46772 * 60.00050 * 1 2 3 32 32 H 1.08005 * 119.98139 * 359.97438 * 4 3 2 33 33 H 1.09000 * 109.46956 * 179.97438 * 7 6 5 34 34 H 1.08991 * 109.47363 * 300.00386 * 7 6 5 35 35 H 1.08999 * 109.46529 * 60.00329 * 7 6 5 36 36 H 1.09000 * 109.47369 * 44.98321 * 9 8 5 37 37 H 0.96702 * 113.99974 * 60.00031 * 10 9 8 38 38 H 1.48501 * 110.00003 * 178.67921 * 11 9 8 39 39 H 1.48498 * 109.99941 * 299.99727 * 11 9 8 40 40 H 1.07995 * 120.02271 * 180.02562 * 12 8 5 41 41 H 0.96995 * 119.99954 * 0.02562 * 16 14 13 42 42 H 1.08997 * 109.46978 * 60.00015 * 17 16 14 43 43 H 1.09004 * 109.47029 * 300.00197 * 17 16 14 44 44 H 1.08995 * 113.61571 * 25.42857 * 20 18 17 45 45 H 1.09002 * 113.61506 * 254.52809 * 20 18 17 46 46 H 1.07999 * 125.95743 * 359.93642 * 24 23 21 47 47 H 1.08002 * 125.53021 * 179.85853 * 26 25 24 48 48 H 1.08998 * 113.61367 * 139.98250 * 28 21 20 49 49 H 1.09002 * 113.61081 * 270.88513 * 28 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3711 0.0058 5 6 1.9252 3.6061 0.0004 6 8 1.1852 4.7437 0.0013 7 6 -0.2359 4.5932 0.0072 8 6 3.3145 3.6835 -0.0054 9 6 3.9914 5.0298 -0.0117 10 8 3.8892 5.6083 -1.3144 11 14 5.7879 4.8237 0.4369 12 6 4.0724 2.5352 -0.0053 13 6 3.4462 1.2852 0.0000 14 6 4.2539 0.0533 -0.0005 15 8 3.7066 -1.0328 0.0047 16 7 5.5995 0.1298 -0.0056 17 6 6.4029 -1.0953 -0.0055 18 6 7.8887 -0.7307 -0.0112 19 1 8.1257 0.0732 -0.7080 20 6 8.4770 -0.5213 1.3941 21 6 9.7323 -1.2543 0.8922 22 1 10.4742 -0.5946 0.4422 23 7 10.3098 -2.1714 1.8779 24 6 9.7390 -2.5892 3.0211 25 7 10.5722 -3.4033 3.6168 26 6 11.6838 -3.5224 2.8921 27 7 11.5695 -2.7892 1.8160 28 6 8.8211 -1.9475 -0.1344 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 0.2149 2.3165 0.0099 33 1 -0.7055 5.5768 0.0077 34 1 -0.5467 4.0422 -0.8804 35 1 -0.5394 4.0456 0.8995 36 1 3.5082 5.6829 0.7149 37 1 2.9799 5.7447 -1.6139 38 1 6.4741 6.1403 0.4031 39 1 5.9079 4.2230 1.7896 40 1 5.1505 2.5993 -0.0094 41 1 6.0360 0.9960 -0.0085 42 1 6.1692 -1.6830 -0.8932 43 1 6.1756 -1.6787 0.8868 44 1 7.9411 -1.0587 2.1764 45 1 8.6526 0.5255 1.6424 46 1 8.7618 -2.3054 3.3826 47 1 12.5389 -4.1299 3.1497 48 1 9.2744 -2.0522 -1.1201 49 1 8.3791 -2.8748 0.2300 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567722_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:26:48 Heat of formation + Delta-G solvation = 17.872932 kcal Electronic energy + Delta-G solvation = -34194.245330 eV Core-core repulsion = 29513.432152 eV Total energy + Delta-G solvation = -4680.813179 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -43.06852 -42.14966 -40.86867 -40.27488 -39.61976 -38.43018 -36.99103 -35.66897 -33.46648 -32.27326 -32.12864 -31.89166 -29.21327 -29.14524 -28.11736 -27.19109 -26.13035 -25.36938 -24.29500 -22.95374 -22.85305 -22.28541 -21.51711 -20.59912 -20.10184 -18.92264 -18.59147 -18.28035 -17.68938 -17.40391 -17.23784 -17.19985 -16.71125 -16.66648 -16.36873 -16.20751 -16.06665 -15.88690 -15.76612 -15.58670 -15.14983 -15.09119 -14.61286 -14.32935 -14.26312 -14.12077 -13.81181 -13.76326 -13.61329 -13.47525 -13.38564 -12.91439 -12.82835 -12.73033 -12.61652 -12.44881 -12.18406 -11.97962 -11.84991 -11.73049 -11.37757 -11.23334 -10.90335 -10.74846 -10.69574 -10.54718 -10.10120 -9.97901 -9.20398 -5.04484 -0.29260 0.05703 0.69490 1.31049 1.31283 1.52700 1.79811 1.88457 1.94065 2.06689 2.08796 2.09992 2.64792 2.91301 3.07335 3.32497 3.35177 3.37737 3.44297 3.45473 3.64293 3.66632 3.78532 3.85517 3.89564 3.93897 4.00605 4.03053 4.06112 4.07540 4.08045 4.15112 4.16872 4.30465 4.32009 4.33671 4.41607 4.47364 4.52989 4.59225 4.66966 4.71391 4.76887 4.86572 4.95980 5.00672 5.20781 5.36850 5.41176 5.52398 5.85657 5.85848 6.19802 6.49255 6.53925 7.18641 7.31298 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.232 3.768 4 C -0.309 4.309 5 C 0.207 3.793 6 O -0.309 6.309 7 C 0.023 3.977 8 C -0.190 4.190 9 C -0.066 4.066 10 O -0.536 6.536 11 Si 0.734 3.266 12 C 0.001 3.999 13 C -0.206 4.206 14 C 0.566 3.434 15 O -0.517 6.517 16 N -0.733 5.733 17 C 0.134 3.866 18 C -0.119 4.119 19 H 0.112 0.888 20 C -0.142 4.142 21 C 0.132 3.868 22 H 0.128 0.872 23 N -0.369 5.369 24 C 0.253 3.747 25 N -0.546 5.546 26 C 0.198 3.802 27 N -0.320 5.320 28 C -0.134 4.134 29 H 0.108 0.892 30 H 0.057 0.943 31 H 0.058 0.942 32 H 0.145 0.855 33 H 0.108 0.892 34 H 0.061 0.939 35 H 0.060 0.940 36 H 0.075 0.925 37 H 0.367 0.633 38 H -0.252 1.252 39 H -0.246 1.246 40 H 0.141 0.859 41 H 0.398 0.602 42 H 0.076 0.924 43 H 0.072 0.928 44 H 0.097 0.903 45 H 0.092 0.908 46 H 0.216 0.784 47 H 0.217 0.783 48 H 0.088 0.912 49 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.136 3.914 -1.717 5.947 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.182 3.818 4 C -0.328 4.328 5 C 0.160 3.840 6 O -0.221 6.221 7 C -0.072 4.072 8 C -0.191 4.191 9 C -0.174 4.174 10 O -0.341 6.341 11 Si 0.633 3.367 12 C -0.018 4.018 13 C -0.210 4.210 14 C 0.354 3.646 15 O -0.393 6.393 16 N -0.387 5.387 17 C 0.011 3.989 18 C -0.139 4.139 19 H 0.130 0.870 20 C -0.181 4.181 21 C 0.029 3.971 22 H 0.146 0.854 23 N -0.160 5.160 24 C -0.044 4.044 25 N -0.272 5.272 26 C -0.105 4.105 27 N -0.147 5.147 28 C -0.173 4.173 29 H 0.126 0.874 30 H 0.076 0.924 31 H 0.076 0.924 32 H 0.163 0.837 33 H 0.126 0.874 34 H 0.080 0.920 35 H 0.079 0.921 36 H 0.092 0.908 37 H 0.214 0.786 38 H -0.177 1.177 39 H -0.171 1.171 40 H 0.158 0.842 41 H 0.233 0.767 42 H 0.094 0.906 43 H 0.091 0.909 44 H 0.115 0.885 45 H 0.110 0.890 46 H 0.232 0.768 47 H 0.234 0.766 48 H 0.107 0.893 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.653 3.225 -1.408 4.407 hybrid contribution -2.296 1.162 0.350 2.597 sum -4.950 4.387 -1.058 6.698 Atomic orbital electron populations 1.23250 0.78178 1.04932 1.01306 1.86404 1.21208 1.24957 1.85771 1.18715 0.90657 0.84430 0.87960 1.21283 1.01132 0.91466 1.18969 1.18749 0.90367 0.84812 0.90089 1.86037 1.19959 1.28916 1.87208 1.23222 0.77321 1.04759 1.01888 1.19438 0.90456 0.96800 1.12449 1.25269 1.13230 0.90515 0.88436 1.86720 1.32155 1.83606 1.31617 0.93459 0.75430 0.85631 0.82226 1.20660 0.98575 0.89845 0.92695 1.19079 0.90682 0.93620 1.17600 1.17764 0.81706 0.88533 0.76620 1.90866 1.71399 1.28650 1.48341 1.45846 1.05956 1.09722 1.77133 1.21292 0.87677 0.86795 1.03162 1.22645 0.93958 0.99705 0.97565 0.87003 1.23613 0.94221 1.02258 0.97970 1.23044 0.94220 0.90759 0.89088 0.85382 1.50580 1.12370 1.35181 1.17875 1.25969 1.00104 0.93264 0.85032 1.70591 1.03334 1.20849 1.32473 1.26079 0.97603 0.98031 0.88787 1.78078 0.98418 1.14749 1.23407 1.23444 0.95575 0.98079 1.00233 0.87395 0.92427 0.92366 0.83733 0.87401 0.92006 0.92144 0.90770 0.78575 1.17657 1.17057 0.84231 0.76685 0.90596 0.90927 0.88482 0.88971 0.76801 0.76623 0.89299 0.88723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.27 -0.76 8.56 -40.58 -0.35 -1.11 16 3 C 0.23 0.43 6.70 -38.73 -0.26 0.17 16 4 C -0.31 0.03 8.01 -39.34 -0.31 -0.29 16 5 C 0.21 0.03 6.62 -39.07 -0.26 -0.23 16 6 O -0.31 0.22 9.36 -18.85 -0.18 0.05 16 7 C 0.02 -0.08 9.81 101.05 0.99 0.91 16 8 C -0.19 0.00 5.27 -104.53 -0.55 -0.56 16 9 C -0.07 0.01 2.32 36.00 0.08 0.09 16 10 O -0.54 -0.36 12.65 -35.23 -0.45 -0.80 16 11 Si 0.73 -1.13 30.16 -169.99 -5.13 -6.26 16 12 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 13 C -0.21 -0.27 5.89 -104.83 -0.62 -0.89 16 14 C 0.57 1.19 7.76 -12.57 -0.10 1.09 16 15 O -0.52 -3.16 15.15 -16.67 -0.25 -3.41 16 16 N -0.73 1.37 5.50 -61.42 -0.34 1.03 16 17 C 0.13 -0.35 5.51 -4.04 -0.02 -0.37 16 18 C -0.12 0.61 3.75 -89.81 -0.34 0.27 16 19 H 0.11 -0.74 8.14 -51.93 -0.42 -1.16 16 20 C -0.14 0.72 7.00 -25.92 -0.18 0.54 16 21 C 0.13 -0.38 5.07 -67.11 -0.34 -0.72 16 22 H 0.13 -0.43 8.14 -51.93 -0.42 -0.85 16 23 N -0.37 -0.22 3.83 -55.32 -0.21 -0.44 16 24 C 0.25 0.14 11.87 -90.65 -1.08 -0.93 16 25 N -0.55 -1.84 11.19 -15.83 -0.18 -2.01 16 26 C 0.20 0.53 13.03 -91.81 -1.20 -0.67 16 27 N -0.32 -1.05 12.70 29.29 0.37 -0.68 16 28 C -0.13 0.48 7.44 -25.92 -0.19 0.29 16 29 H 0.11 -0.26 8.14 -51.93 -0.42 -0.69 16 30 H 0.06 -0.16 7.65 -51.93 -0.40 -0.56 16 31 H 0.06 -0.17 7.67 -51.93 -0.40 -0.57 16 32 H 0.15 -0.34 4.50 -52.48 -0.24 -0.57 16 33 H 0.11 -0.55 8.14 -51.93 -0.42 -0.97 16 34 H 0.06 -0.28 7.65 -51.93 -0.40 -0.68 16 35 H 0.06 -0.26 7.65 -51.93 -0.40 -0.65 16 36 H 0.07 0.02 7.82 -51.93 -0.41 -0.39 16 37 H 0.37 -0.44 8.59 45.56 0.39 -0.05 16 38 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 39 H -0.25 0.17 7.11 56.52 0.40 0.57 16 40 H 0.14 -0.56 3.43 -52.49 -0.18 -0.74 16 41 H 0.40 -1.91 6.49 -40.82 -0.26 -2.17 16 42 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.07 -0.12 7.84 -51.93 -0.41 -0.53 16 44 H 0.10 -0.51 6.14 -51.93 -0.32 -0.82 16 45 H 0.09 -0.56 8.14 -51.93 -0.42 -0.99 16 46 H 0.22 -0.71 6.75 -52.49 -0.35 -1.07 16 47 H 0.22 -0.12 8.06 -52.49 -0.42 -0.54 16 48 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 49 H 0.09 -0.24 8.10 -51.93 -0.42 -0.66 16 LS Contribution 402.63 15.07 6.07 6.07 Total: 0.00 -12.85 402.63 -10.70 -23.55 By element: Atomic # 1 Polarization: -8.99 SS G_CDS: -6.37 Total: -15.35 kcal Atomic # 6 Polarization: 3.06 SS G_CDS: -3.70 Total: -0.64 kcal Atomic # 7 Polarization: -1.74 SS G_CDS: -0.36 Total: -2.10 kcal Atomic # 8 Polarization: -4.05 SS G_CDS: -1.22 Total: -5.27 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.13 Total: -6.26 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -12.85 -10.70 -23.55 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.428 kcal (2) G-P(sol) polarization free energy of solvation -12.855 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.573 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.700 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.555 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds