Wall clock time and date at job start Sun Mar 7 2021 07:26:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35651 * 116.99955 * 2 1 4 4 C 1.38411 * 120.12381 * 0.27633 * 3 2 1 5 5 C 1.38721 * 120.03436 * 180.25451 * 4 3 2 6 6 O 1.35713 * 119.86686 * 179.76431 * 5 4 3 7 7 C 1.42909 * 116.99660 * 359.97438 * 6 5 4 8 8 C 1.39143 * 120.27630 * 359.74411 * 5 4 3 9 9 C 1.50692 * 119.88234 * 179.97438 * 8 5 4 10 10 O 1.42896 * 109.47337 * 284.97558 * 9 8 5 11 11 Si 1.86306 * 109.47064 * 164.97798 * 9 8 5 12 12 C 1.37587 * 120.23865 * 359.97438 * 8 5 4 13 13 C 1.39818 * 119.96208 * 0.02562 * 12 8 5 14 14 C 1.47307 * 120.13490 * 179.97438 * 13 12 8 15 15 O 1.21624 * 120.00231 * 179.97438 * 14 13 12 16 16 N 1.34775 * 119.99899 * 0.02562 * 14 13 12 17 17 C 1.46506 * 119.99953 * 179.97438 * 16 14 13 18 18 C 1.52994 * 109.46900 * 180.02562 * 17 16 14 19 19 H 1.09000 * 112.90982 * 316.24990 * 18 17 16 20 20 C 1.53775 * 113.61659 * 87.50536 * 18 17 16 21 21 C 1.53786 * 87.08460 * 139.97890 * 20 18 17 22 22 H 1.08997 * 113.68832 * 89.12261 * 21 20 18 23 23 N 1.46499 * 113.61516 * 220.02069 * 21 20 18 24 24 C 1.34430 * 126.82421 * 12.50838 * 23 21 20 25 25 N 1.30832 * 108.07308 * 179.72086 * 24 23 21 26 26 C 1.33234 * 109.83313 * 0.40801 * 25 24 23 27 27 N 1.30720 * 108.94479 * 359.58957 * 26 25 24 28 28 C 1.53783 * 87.07818 * 334.56885 * 21 20 18 29 29 H 1.09003 * 109.46927 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47059 * 299.99860 * 1 2 3 31 31 H 1.09000 * 109.46772 * 60.00050 * 1 2 3 32 32 H 1.08005 * 119.98139 * 359.97438 * 4 3 2 33 33 H 1.09000 * 109.46956 * 179.97438 * 7 6 5 34 34 H 1.08991 * 109.47363 * 300.00386 * 7 6 5 35 35 H 1.08999 * 109.46529 * 60.00329 * 7 6 5 36 36 H 1.09000 * 109.47369 * 44.98321 * 9 8 5 37 37 H 0.96702 * 113.99974 * 60.00031 * 10 9 8 38 38 H 1.48501 * 110.00003 * 178.67921 * 11 9 8 39 39 H 1.48498 * 109.99941 * 299.99727 * 11 9 8 40 40 H 1.07995 * 120.02271 * 180.02562 * 12 8 5 41 41 H 0.96995 * 119.99954 * 0.02562 * 16 14 13 42 42 H 1.08997 * 109.46978 * 60.00015 * 17 16 14 43 43 H 1.09004 * 109.47029 * 300.00197 * 17 16 14 44 44 H 1.08995 * 113.61571 * 25.42857 * 20 18 17 45 45 H 1.09002 * 113.61506 * 254.52809 * 20 18 17 46 46 H 1.07999 * 125.95743 * 359.93642 * 24 23 21 47 47 H 1.08002 * 125.53021 * 179.85853 * 26 25 24 48 48 H 1.08998 * 113.61367 * 139.98250 * 28 21 20 49 49 H 1.09002 * 113.61081 * 270.88513 * 28 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3711 0.0058 5 6 1.9252 3.6061 0.0004 6 8 1.1852 4.7437 0.0013 7 6 -0.2359 4.5932 0.0072 8 6 3.3145 3.6835 -0.0054 9 6 3.9914 5.0298 -0.0117 10 8 3.8892 5.6083 -1.3144 11 14 5.7879 4.8237 0.4369 12 6 4.0724 2.5352 -0.0053 13 6 3.4462 1.2852 0.0000 14 6 4.2539 0.0533 -0.0005 15 8 3.7066 -1.0328 0.0047 16 7 5.5995 0.1298 -0.0056 17 6 6.4029 -1.0953 -0.0055 18 6 7.8887 -0.7307 -0.0112 19 1 8.1257 0.0732 -0.7080 20 6 8.4770 -0.5213 1.3941 21 6 9.7323 -1.2543 0.8922 22 1 10.4742 -0.5946 0.4422 23 7 10.3098 -2.1714 1.8779 24 6 9.7390 -2.5892 3.0211 25 7 10.5722 -3.4033 3.6168 26 6 11.6838 -3.5224 2.8921 27 7 11.5695 -2.7892 1.8160 28 6 8.8211 -1.9475 -0.1344 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 0.2149 2.3165 0.0099 33 1 -0.7055 5.5768 0.0077 34 1 -0.5467 4.0422 -0.8804 35 1 -0.5394 4.0456 0.8995 36 1 3.5082 5.6829 0.7149 37 1 2.9799 5.7447 -1.6139 38 1 6.4741 6.1403 0.4031 39 1 5.9079 4.2230 1.7896 40 1 5.1505 2.5993 -0.0094 41 1 6.0360 0.9960 -0.0085 42 1 6.1692 -1.6830 -0.8932 43 1 6.1756 -1.6787 0.8868 44 1 7.9411 -1.0587 2.1764 45 1 8.6526 0.5255 1.6424 46 1 8.7618 -2.3054 3.3826 47 1 12.5389 -4.1299 3.1497 48 1 9.2744 -2.0522 -1.1201 49 1 8.3791 -2.8748 0.2300 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567722_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:26:46 Heat of formation + Delta-G solvation = 15.945985 kcal Electronic energy + Delta-G solvation = -34194.328889 eV Core-core repulsion = 29513.432152 eV Total energy + Delta-G solvation = -4680.896737 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -43.09039 -42.10681 -40.76909 -40.15773 -39.59765 -38.37799 -36.98632 -35.67357 -33.46014 -32.24655 -32.18016 -31.85589 -29.07776 -28.95462 -27.96734 -26.85628 -26.08315 -25.29423 -24.23356 -22.93207 -22.83445 -22.20309 -21.51408 -20.39588 -20.00267 -18.83742 -18.54788 -18.22972 -17.64286 -17.32982 -17.16101 -17.00207 -16.66553 -16.59254 -16.33275 -16.16059 -16.00387 -15.79077 -15.69966 -15.53007 -15.12124 -15.03597 -14.51371 -14.28577 -14.18973 -14.06733 -13.64062 -13.54541 -13.47474 -13.33006 -13.26527 -12.80584 -12.68084 -12.55629 -12.52351 -12.15990 -12.13825 -11.71374 -11.66079 -11.57393 -11.33377 -11.23339 -11.01185 -10.84678 -10.81421 -10.50963 -10.09154 -9.91083 -9.18638 -4.93098 -0.26850 0.08578 0.66185 1.39536 1.40958 1.63545 1.77570 1.98903 2.02945 2.05750 2.14202 2.19480 2.62880 3.17762 3.37699 3.45970 3.47413 3.52424 3.60671 3.73232 3.73787 3.77178 3.91676 3.95554 4.09279 4.17804 4.18825 4.23298 4.25431 4.26409 4.27987 4.28629 4.37650 4.40476 4.63148 4.65928 4.66410 4.70244 4.76022 4.79101 4.84294 4.94018 4.96740 5.01557 5.03500 5.22354 5.28545 5.42300 5.45439 5.54334 5.92833 5.97934 6.26673 6.59895 6.61946 7.11967 7.30684 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.303 6.303 3 C 0.213 3.787 4 C -0.308 4.308 5 C 0.203 3.797 6 O -0.319 6.319 7 C 0.013 3.987 8 C -0.200 4.200 9 C -0.079 4.079 10 O -0.547 6.547 11 Si 0.808 3.192 12 C 0.010 3.990 13 C -0.223 4.223 14 C 0.562 3.438 15 O -0.567 6.567 16 N -0.714 5.714 17 C 0.134 3.866 18 C -0.101 4.101 19 H 0.137 0.863 20 C -0.133 4.133 21 C 0.120 3.880 22 H 0.135 0.865 23 N -0.367 5.367 24 C 0.254 3.746 25 N -0.582 5.582 26 C 0.187 3.813 27 N -0.352 5.352 28 C -0.135 4.135 29 H 0.112 0.888 30 H 0.070 0.930 31 H 0.071 0.929 32 H 0.163 0.837 33 H 0.122 0.878 34 H 0.071 0.929 35 H 0.067 0.933 36 H 0.068 0.932 37 H 0.373 0.627 38 H -0.298 1.298 39 H -0.249 1.249 40 H 0.169 0.831 41 H 0.414 0.586 42 H 0.062 0.938 43 H 0.063 0.937 44 H 0.100 0.900 45 H 0.113 0.887 46 H 0.248 0.752 47 H 0.235 0.765 48 H 0.088 0.912 49 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.368 5.340 -1.802 7.131 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.214 6.214 3 C 0.164 3.836 4 C -0.327 4.327 5 C 0.155 3.845 6 O -0.231 6.231 7 C -0.081 4.081 8 C -0.201 4.201 9 C -0.186 4.186 10 O -0.353 6.353 11 Si 0.708 3.292 12 C -0.008 4.008 13 C -0.228 4.228 14 C 0.351 3.649 15 O -0.446 6.446 16 N -0.368 5.368 17 C 0.011 3.989 18 C -0.120 4.120 19 H 0.155 0.845 20 C -0.172 4.172 21 C 0.019 3.981 22 H 0.153 0.847 23 N -0.158 5.158 24 C -0.042 4.042 25 N -0.310 5.310 26 C -0.116 4.116 27 N -0.180 5.180 28 C -0.174 4.174 29 H 0.130 0.870 30 H 0.089 0.911 31 H 0.090 0.910 32 H 0.180 0.820 33 H 0.140 0.860 34 H 0.089 0.911 35 H 0.085 0.915 36 H 0.086 0.914 37 H 0.222 0.778 38 H -0.226 1.226 39 H -0.174 1.174 40 H 0.186 0.814 41 H 0.253 0.747 42 H 0.080 0.920 43 H 0.082 0.918 44 H 0.118 0.882 45 H 0.132 0.868 46 H 0.264 0.736 47 H 0.251 0.749 48 H 0.107 0.893 49 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -2.895 4.683 -1.515 5.710 hybrid contribution -2.322 0.809 0.339 2.482 sum -5.217 5.492 -1.176 7.665 Atomic orbital electron populations 1.23464 0.76598 1.05739 1.02583 1.86367 1.23117 1.25892 1.86055 1.19021 0.91258 0.84705 0.88623 1.21409 1.02004 0.90797 1.18517 1.18917 0.90745 0.85116 0.89707 1.86036 1.21380 1.28708 1.86967 1.23472 0.75888 1.06017 1.02680 1.19579 0.90711 0.97019 1.12802 1.25551 1.14687 0.90317 0.88019 1.86681 1.32917 1.83723 1.32014 0.92670 0.72544 0.83133 0.80838 1.20874 0.99908 0.88672 0.91311 1.19208 0.90806 0.94006 1.18739 1.17987 0.82754 0.88109 0.76056 1.90835 1.72527 1.30295 1.50988 1.45718 1.04839 1.10881 1.75386 1.21300 0.89087 0.86384 1.02137 1.22566 0.91549 0.99522 0.98374 0.84469 1.23650 0.92455 1.03221 0.97827 1.23414 0.94974 0.90692 0.89060 0.84724 1.50787 1.11553 1.35059 1.18358 1.26575 1.00722 0.92217 0.84668 1.70571 1.04184 1.22467 1.33815 1.26506 0.98193 0.98202 0.88675 1.77986 1.00228 1.15712 1.24085 1.23420 0.95802 0.98189 1.00004 0.86952 0.91115 0.91037 0.81979 0.85984 0.91077 0.91474 0.91425 0.77842 1.22553 1.17407 0.81392 0.74739 0.92012 0.91819 0.88201 0.86841 0.73599 0.74934 0.89291 0.90059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 9.81 113.37 1.11 1.09 16 2 O -0.30 -2.07 8.56 -68.70 -0.59 -2.66 16 3 C 0.21 0.92 6.70 22.82 0.15 1.07 16 4 C -0.31 0.08 8.01 22.43 0.18 0.26 16 5 C 0.20 -0.01 6.62 22.60 0.15 0.14 16 6 O -0.32 0.60 9.36 -90.35 -0.85 -0.24 16 7 C 0.01 -0.11 9.81 113.37 1.11 1.00 16 8 C -0.20 0.12 5.27 -19.80 -0.10 0.01 16 9 C -0.08 0.06 2.32 71.23 0.17 0.23 16 10 O -0.55 -0.50 12.65 -148.98 -1.89 -2.39 16 11 Si 0.81 -3.51 30.16 68.60 2.07 -1.44 16 12 C 0.01 -0.03 8.14 22.50 0.18 0.16 16 13 C -0.22 -0.62 5.89 -20.00 -0.12 -0.74 16 14 C 0.56 2.63 7.76 86.63 0.67 3.31 16 15 O -0.57 -7.89 15.15 16.85 0.26 -7.64 16 16 N -0.71 3.26 5.50 -466.48 -2.57 0.69 16 17 C 0.13 -0.74 5.51 86.38 0.48 -0.27 16 18 C -0.10 1.20 3.75 -10.27 -0.04 1.16 16 19 H 0.14 -2.24 8.14 -2.39 -0.02 -2.26 16 20 C -0.13 1.62 7.00 31.12 0.22 1.84 16 21 C 0.12 -0.80 5.07 45.52 0.23 -0.57 16 22 H 0.14 -1.06 8.14 -2.39 -0.02 -1.08 16 23 N -0.37 -0.42 3.83 -328.93 -1.26 -1.68 16 24 C 0.25 0.26 11.87 180.36 2.14 2.40 16 25 N -0.58 -4.29 11.19 -204.00 -2.28 -6.57 16 26 C 0.19 1.18 13.03 180.77 2.36 3.54 16 27 N -0.35 -2.58 12.70 -61.24 -0.78 -3.35 16 28 C -0.13 1.02 7.44 31.12 0.23 1.26 16 29 H 0.11 -0.46 8.14 -2.39 -0.02 -0.48 16 30 H 0.07 -0.40 7.65 -2.39 -0.02 -0.42 16 31 H 0.07 -0.41 7.67 -2.39 -0.02 -0.43 16 32 H 0.16 -0.83 4.50 -2.91 -0.01 -0.85 16 33 H 0.12 -1.37 8.14 -2.39 -0.02 -1.39 16 34 H 0.07 -0.71 7.65 -2.39 -0.02 -0.73 16 35 H 0.07 -0.63 7.65 -2.39 -0.02 -0.65 16 36 H 0.07 0.02 7.82 -2.39 -0.02 0.00 16 37 H 0.37 -0.94 8.59 -74.06 -0.64 -1.58 16 38 H -0.30 -1.02 7.11 99.48 0.71 -0.32 16 39 H -0.25 0.91 7.11 99.48 0.71 1.62 16 40 H 0.17 -1.71 3.43 -2.91 -0.01 -1.72 16 41 H 0.41 -4.88 6.49 -92.71 -0.60 -5.48 16 42 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 43 H 0.06 -0.20 7.84 -2.39 -0.02 -0.22 16 44 H 0.10 -1.23 6.14 -2.39 -0.01 -1.24 16 45 H 0.11 -1.77 8.14 -2.39 -0.02 -1.79 16 46 H 0.25 -1.89 6.75 -2.91 -0.02 -1.91 16 47 H 0.23 0.02 8.06 -2.91 -0.02 0.00 16 48 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 49 H 0.08 -0.36 8.10 -2.39 -0.02 -0.38 16 Total: 0.00 -32.60 402.63 1.06 -31.53 By element: Atomic # 1 Polarization: -21.96 SS G_CDS: -0.17 Total: -22.13 kcal Atomic # 6 Polarization: 6.76 SS G_CDS: 9.12 Total: 15.88 kcal Atomic # 7 Polarization: -4.03 SS G_CDS: -6.89 Total: -10.92 kcal Atomic # 8 Polarization: -9.86 SS G_CDS: -3.06 Total: -12.93 kcal Atomic # 14 Polarization: -3.51 SS G_CDS: 2.07 Total: -1.44 kcal Total: -32.60 1.06 -31.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.480 kcal (2) G-P(sol) polarization free energy of solvation -32.599 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.881 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.065 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.534 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds