Wall clock time and date at job start Sun Mar 7 2021 07:27:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86292 * 109.47405 * 2 1 4 4 C 1.50705 * 109.46698 * 119.99961 * 2 1 3 5 5 C 1.38614 * 119.84446 * 75.00043 * 4 2 1 6 6 F 1.35101 * 119.91733 * 359.97438 * 5 4 2 7 7 C 1.38112 * 120.16658 * 179.97438 * 5 4 2 8 8 C 1.39615 * 119.84992 * 0.02562 * 7 5 4 9 9 C 1.47700 * 120.15364 * 180.02562 * 8 7 5 10 10 O 1.21569 * 119.99777 * 179.97438 * 9 8 7 11 11 N 1.34777 * 120.00001 * 0.02562 * 9 8 7 12 12 C 1.46493 * 119.99981 * 179.97438 * 11 9 8 13 13 C 1.53003 * 109.47111 * 180.02562 * 12 11 9 14 14 H 1.08996 * 112.85140 * 43.80189 * 13 12 11 15 15 C 1.53781 * 113.61480 * 175.00222 * 13 12 11 16 16 C 1.53786 * 87.17350 * 139.93948 * 15 13 12 17 17 H 1.08993 * 113.61491 * 89.15923 * 16 15 13 18 18 N 1.46501 * 113.61366 * 220.06429 * 16 15 13 19 19 C 1.34431 * 126.82705 * 84.70495 * 18 16 15 20 20 N 1.30832 * 108.07682 * 179.89372 * 19 18 16 21 21 C 1.33244 * 109.82965 * 0.38628 * 20 19 18 22 22 N 1.30707 * 108.94366 * 359.75990 * 21 20 19 23 23 C 1.53782 * 113.61259 * 272.50057 * 13 12 11 24 24 C 1.39843 * 119.69094 * 0.27765 * 8 7 5 25 25 F 1.35098 * 120.08225 * 179.70484 * 24 8 7 26 26 C 1.38231 * 119.84268 * 254.97517 * 4 2 1 27 27 H 0.96697 * 114.00078 * 300.00688 * 1 2 3 28 28 H 1.09001 * 109.47025 * 239.99334 * 2 1 3 29 29 H 1.48503 * 110.00073 * 178.68017 * 3 2 1 30 30 H 1.48502 * 110.00272 * 299.99839 * 3 2 1 31 31 H 1.07999 * 120.07124 * 180.02562 * 7 5 4 32 32 H 0.97001 * 119.99565 * 0.02562 * 11 9 8 33 33 H 1.08994 * 109.47006 * 60.00362 * 12 11 9 34 34 H 1.09002 * 109.47617 * 299.99816 * 12 11 9 35 35 H 1.09002 * 113.61445 * 254.52948 * 15 13 12 36 36 H 1.09002 * 113.61408 * 25.34678 * 15 13 12 37 37 H 1.08000 * 125.95629 * 0.04355 * 19 18 16 38 38 H 1.07997 * 125.52378 * 179.80429 * 21 20 19 39 39 H 1.08997 * 113.61668 * 334.56352 * 23 13 12 40 40 H 1.08994 * 113.61387 * 105.47087 * 23 13 12 41 41 H 1.08002 * 119.92140 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7563 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.8677 -2.0932 1.3029 6 9 1.3557 -2.7992 0.2711 7 6 2.3266 -2.7512 2.4272 8 6 2.8550 -2.0202 3.4930 9 6 3.3481 -2.7170 4.6983 10 8 3.8081 -2.0777 5.6244 11 7 3.2891 -4.0615 4.7710 12 6 3.7788 -4.7526 5.9662 13 6 3.5985 -6.2620 5.7924 14 1 3.8946 -6.6125 4.8037 15 6 4.1938 -7.0901 6.9434 16 6 2.9518 -7.9906 6.8366 17 1 3.0696 -8.8154 6.1340 18 7 2.4236 -8.4181 8.1345 19 6 1.5746 -7.7364 8.9231 20 7 1.3444 -8.4572 9.9904 21 6 2.0320 -9.5966 9.9233 22 7 2.7084 -9.6188 8.8050 23 6 2.2198 -6.7736 6.2420 24 6 2.9102 -0.6250 3.4161 25 9 3.4145 0.0905 4.4451 26 6 2.4535 0.0200 2.2815 27 1 -0.3933 0.4418 0.7650 28 1 1.7923 -0.5139 -0.8899 29 1 3.5346 1.7701 0.0321 30 1 1.5616 2.4679 -1.2085 31 1 2.2768 -3.8286 2.4818 32 1 2.9231 -4.5715 4.0315 33 1 3.2150 -4.4169 6.8366 34 1 4.8357 -4.5274 6.1089 35 1 5.1235 -7.5957 6.6822 36 1 4.2586 -6.5453 7.8853 37 1 1.1540 -6.7645 8.7112 38 1 2.0302 -10.3756 10.6713 39 1 1.7435 -6.1428 6.9926 40 1 1.5558 -7.0237 5.4147 41 1 2.5000 1.0971 2.2184 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567722_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:27:42 Heat of formation + Delta-G solvation = 3.548301 kcal Electronic energy + Delta-G solvation = -29766.875726 eV Core-core repulsion = 25094.973056 eV Total energy + Delta-G solvation = -4671.902670 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.118 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -50.17514 -50.06403 -43.14248 -41.50313 -40.56296 -39.78489 -37.77452 -36.02404 -33.85994 -33.20896 -32.13161 -31.49272 -29.53322 -27.66873 -27.30676 -25.32721 -24.54253 -23.70475 -22.99060 -22.48690 -21.97767 -20.81825 -19.78815 -19.02731 -18.71783 -18.36813 -17.92949 -17.47301 -17.34646 -17.05913 -16.85157 -16.63880 -16.33253 -16.27677 -16.11388 -15.98824 -15.90675 -15.61185 -15.26840 -15.19329 -14.79905 -14.66072 -14.26442 -13.92941 -13.90988 -13.85162 -13.58610 -13.27504 -13.08846 -12.93788 -12.61604 -12.45519 -12.21848 -12.12609 -11.98333 -11.23064 -10.96668 -10.76998 -10.75982 -10.72304 -10.63531 -10.37076 -9.90764 -5.24203 -0.92107 -0.44417 0.62265 0.98763 1.22534 1.32008 1.46419 1.70290 1.79432 2.02610 2.16553 2.66778 2.70842 2.79467 2.92601 2.97033 3.08672 3.18761 3.25825 3.33125 3.34149 3.40581 3.61039 3.66277 3.85592 3.94538 3.98870 4.04040 4.17538 4.19798 4.20562 4.28963 4.37885 4.39016 4.45978 4.52327 4.54358 4.60308 4.62774 4.84284 5.08076 5.26088 5.30155 5.45705 5.78134 6.10655 6.30324 6.88000 7.11867 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.072 4.072 3 Si 0.689 3.311 4 C -0.100 4.100 5 C 0.110 3.890 6 F -0.121 7.121 7 C -0.094 4.094 8 C -0.142 4.142 9 C 0.560 3.440 10 O -0.511 6.511 11 N -0.724 5.724 12 C 0.132 3.868 13 C -0.120 4.120 14 H 0.110 0.890 15 C -0.134 4.134 16 C 0.133 3.867 17 H 0.128 0.872 18 N -0.371 5.371 19 C 0.253 3.747 20 N -0.544 5.544 21 C 0.199 3.801 22 N -0.320 5.320 23 C -0.141 4.141 24 C 0.160 3.840 25 F -0.103 7.103 26 C -0.130 4.130 27 H 0.381 0.619 28 H 0.122 0.878 29 H -0.250 1.250 30 H -0.246 1.246 31 H 0.151 0.849 32 H 0.401 0.599 33 H 0.077 0.923 34 H 0.079 0.921 35 H 0.089 0.911 36 H 0.096 0.904 37 H 0.216 0.784 38 H 0.218 0.782 39 H 0.098 0.902 40 H 0.091 0.909 41 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.977 0.979 -2.972 3.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.183 4.183 3 Si 0.589 3.411 4 C -0.102 4.102 5 C 0.091 3.909 6 F -0.099 7.099 7 C -0.113 4.113 8 C -0.146 4.146 9 C 0.346 3.654 10 O -0.387 6.387 11 N -0.377 5.377 12 C 0.009 3.991 13 C -0.139 4.139 14 H 0.128 0.872 15 C -0.173 4.173 16 C 0.030 3.970 17 H 0.146 0.854 18 N -0.161 5.161 19 C -0.044 4.044 20 N -0.271 5.271 21 C -0.104 4.104 22 N -0.146 5.146 23 C -0.179 4.179 24 C 0.140 3.860 25 F -0.081 7.081 26 C -0.149 4.149 27 H 0.229 0.771 28 H 0.140 0.860 29 H -0.175 1.175 30 H -0.170 1.170 31 H 0.169 0.831 32 H 0.237 0.763 33 H 0.095 0.905 34 H 0.097 0.903 35 H 0.107 0.893 36 H 0.114 0.886 37 H 0.232 0.768 38 H 0.235 0.765 39 H 0.116 0.884 40 H 0.110 0.890 41 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 0.216 1.209 -3.264 3.487 hybrid contribution -0.133 -0.871 -0.688 1.118 sum 0.082 0.338 -3.952 3.967 Atomic orbital electron populations 1.86596 1.16050 1.81606 1.49209 1.25150 0.86005 1.10767 0.96338 0.94830 0.81544 0.76672 0.88095 1.20531 0.99290 0.92724 0.97621 1.17227 0.98912 0.88880 0.85929 1.91588 1.84209 1.78013 1.56086 1.21168 0.97752 1.01054 0.91356 1.19855 1.05725 0.92549 0.96480 1.17810 0.79134 0.82283 0.86216 1.90911 1.44041 1.65751 1.37969 1.45828 1.64745 1.06216 1.20903 1.21386 1.00862 0.89382 0.87516 1.22628 0.96599 0.94257 1.00422 0.87213 1.23445 0.98025 0.96615 0.99240 1.23025 0.95776 0.96786 0.81437 0.85416 1.50559 1.34823 1.13670 1.17077 1.25974 0.91814 0.99428 0.87144 1.70603 1.27249 1.05860 1.23397 1.26095 0.92567 0.96315 0.95400 1.78082 1.24890 1.02248 1.09403 1.23634 0.97322 0.95295 1.01689 1.17489 0.95229 0.87973 0.85357 1.91664 1.83532 1.77056 1.55858 1.20882 1.01070 1.01040 0.91863 0.77091 0.86031 1.17455 1.16980 0.83122 0.76313 0.90486 0.90307 0.89261 0.88596 0.76786 0.76549 0.88392 0.89044 0.82381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.72 12.88 -35.23 -0.45 0.27 16 2 C -0.07 0.14 2.44 36.01 0.09 0.23 16 3 Si 0.69 -1.94 29.90 -169.99 -5.08 -7.02 16 4 C -0.10 0.19 5.27 -104.48 -0.55 -0.36 16 5 C 0.11 -0.15 7.23 -39.49 -0.29 -0.44 16 6 F -0.12 -0.03 16.73 2.25 0.04 0.01 16 7 C -0.09 0.27 9.52 -39.11 -0.37 -0.11 16 8 C -0.14 0.13 5.88 -104.92 -0.62 -0.48 16 9 C 0.56 0.14 7.77 -12.40 -0.10 0.04 16 10 O -0.51 -2.28 15.34 5.31 0.08 -2.20 16 11 N -0.72 2.44 5.51 -61.30 -0.34 2.10 16 12 C 0.13 -0.49 5.51 -4.04 -0.02 -0.51 16 13 C -0.12 0.70 3.76 -89.80 -0.34 0.36 16 14 H 0.11 -0.77 8.14 -51.93 -0.42 -1.19 16 15 C -0.13 0.56 7.43 -25.92 -0.19 0.36 16 16 C 0.13 -0.44 5.08 -67.02 -0.34 -0.78 16 17 H 0.13 -0.46 8.14 -51.93 -0.42 -0.89 16 18 N -0.37 -0.06 3.83 -55.23 -0.21 -0.27 16 19 C 0.25 0.01 11.87 -90.65 -1.08 -1.06 16 20 N -0.54 -1.59 11.19 -15.83 -0.18 -1.77 16 21 C 0.20 0.45 13.03 -91.82 -1.20 -0.74 16 22 N -0.32 -0.93 12.70 29.29 0.37 -0.56 16 23 C -0.14 0.81 7.01 -25.82 -0.18 0.63 16 24 C 0.16 -0.03 7.28 -38.97 -0.28 -0.31 16 25 F -0.10 -0.24 15.55 2.25 0.04 -0.20 16 26 C -0.13 0.30 8.62 -39.57 -0.34 -0.04 16 27 H 0.38 -2.14 8.70 45.56 0.40 -1.74 16 28 H 0.12 -0.16 7.89 -51.93 -0.41 -0.57 16 29 H -0.25 0.10 7.11 56.52 0.40 0.50 16 30 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 31 H 0.15 -0.88 6.40 -52.49 -0.34 -1.22 16 32 H 0.40 -2.47 6.50 -40.82 -0.27 -2.74 16 33 H 0.08 -0.23 7.84 -51.93 -0.41 -0.64 16 34 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 35 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 36 H 0.10 -0.31 8.10 -51.93 -0.42 -0.73 16 37 H 0.22 -0.85 6.75 -52.49 -0.35 -1.20 16 38 H 0.22 -0.20 8.06 -52.49 -0.42 -0.62 16 39 H 0.10 -0.59 6.14 -51.93 -0.32 -0.91 16 40 H 0.09 -0.60 8.14 -51.93 -0.42 -1.02 16 41 H 0.16 -0.75 5.10 -52.49 -0.27 -1.01 16 LS Contribution 357.73 15.07 5.39 5.39 Total: 0.00 -12.27 357.73 -10.27 -22.54 By element: Atomic # 1 Polarization: -10.97 SS G_CDS: -4.12 Total: -15.08 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -5.80 Total: -3.20 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -0.35 Total: -0.50 kcal Atomic # 8 Polarization: -1.56 SS G_CDS: -0.37 Total: -1.93 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.07 Total: -0.19 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: -5.08 Total: -7.02 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -12.27 -10.27 -22.54 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.089 kcal (2) G-P(sol) polarization free energy of solvation -12.272 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.268 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.541 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds