Wall clock time and date at job start Sun Mar 7 2021 07:28:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86301 * 109.47416 * 2 1 4 4 C 1.50701 * 109.47157 * 120.00278 * 2 1 3 5 5 C 1.35091 * 126.07142 * 254.97016 * 4 2 1 6 6 N 1.35043 * 107.97194 * 179.97438 * 5 4 2 7 7 C 1.46507 * 125.92500 * 180.02562 * 6 5 4 8 8 C 1.50697 * 109.46928 * 125.00590 * 7 6 5 9 9 O 1.21281 * 120.00364 * 359.97438 * 8 7 6 10 10 N 1.34783 * 120.00012 * 180.02562 * 8 7 6 11 11 C 1.46500 * 120.00119 * 179.97438 * 10 8 7 12 12 C 1.52995 * 109.47108 * 179.97438 * 11 10 8 13 13 H 1.09002 * 112.85043 * 314.66487 * 12 11 10 14 14 C 1.53785 * 113.69093 * 85.93603 * 12 11 10 15 15 C 1.53779 * 87.08093 * 139.99088 * 14 12 11 16 16 H 1.09003 * 113.61186 * 89.11185 * 15 14 12 17 17 N 1.46495 * 113.69143 * 220.00570 * 15 14 12 18 18 C 1.34438 * 126.82215 * 12.53549 * 17 15 14 19 19 N 1.30824 * 108.07702 * 179.97438 * 18 17 15 20 20 C 1.33243 * 109.83402 * 359.97438 * 19 18 17 21 21 N 1.30714 * 108.94081 * 359.75486 * 20 19 18 22 22 C 1.53781 * 113.61293 * 183.47228 * 12 11 10 23 23 N 1.40069 * 108.14356 * 0.26897 * 6 5 4 24 24 C 1.31617 * 108.10475 * 359.55063 * 23 6 5 25 25 C 1.48424 * 126.03828 * 180.13120 * 24 23 6 26 26 C 1.39320 * 120.11848 * 145.07733 * 25 24 23 27 27 C 1.38025 * 119.87674 * 179.77237 * 26 25 24 28 28 C 1.38322 * 120.11895 * 0.48798 * 27 26 25 29 29 C 1.38322 * 120.24199 * 359.79387 * 28 27 26 30 30 C 1.38022 * 120.11864 * 359.94853 * 29 28 27 31 31 H 0.96701 * 114.00223 * 299.99839 * 1 2 3 32 32 H 1.09001 * 109.47403 * 240.00123 * 2 1 3 33 33 H 1.48492 * 110.00351 * 178.68029 * 3 2 1 34 34 H 1.48501 * 109.99913 * 300.00374 * 3 2 1 35 35 H 1.07991 * 126.01198 * 0.02562 * 5 4 2 36 36 H 1.09000 * 109.46880 * 5.00271 * 7 6 5 37 37 H 1.08996 * 109.47091 * 245.00070 * 7 6 5 38 38 H 0.96997 * 119.99419 * 359.97438 * 10 8 7 39 39 H 1.09005 * 109.46936 * 59.99437 * 11 10 8 40 40 H 1.09004 * 109.46937 * 300.00111 * 11 10 8 41 41 H 1.09003 * 113.60734 * 254.54208 * 14 12 11 42 42 H 1.08996 * 113.61146 * 25.43706 * 14 12 11 43 43 H 1.08002 * 125.95625 * 359.92971 * 18 17 15 44 44 H 1.07999 * 125.53208 * 180.02562 * 20 19 18 45 45 H 1.09005 * 113.61302 * 334.47929 * 22 12 11 46 46 H 1.08996 * 113.61527 * 105.30092 * 22 12 11 47 47 H 1.08000 * 120.06172 * 0.02562 * 26 25 24 48 48 H 1.07999 * 119.94285 * 180.28323 * 27 26 25 49 49 H 1.08003 * 119.87856 * 179.76276 * 28 27 26 50 50 H 1.08001 * 119.93863 * 179.97438 * 29 28 27 51 51 H 1.07999 * 120.06105 * 180.02562 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4634 -0.1250 2.3254 6 7 2.7882 -1.0991 3.2025 7 6 3.3931 -0.9010 4.5220 8 6 2.5388 -1.5649 5.5711 9 8 1.5243 -2.1459 5.2484 10 7 2.9017 -1.5122 6.8681 11 6 2.0709 -2.1570 7.8879 12 6 2.7027 -1.9503 9.2659 13 1 3.7770 -2.1345 9.2709 14 6 2.3016 -0.6261 9.9372 15 6 2.2145 -1.4120 11.2561 16 1 3.1555 -1.4491 11.8052 17 7 1.0795 -1.0255 12.0978 18 6 0.0305 -0.2662 11.7369 19 7 -0.7637 -0.1534 12.7703 20 6 -0.2579 -0.8243 13.8045 21 7 0.8677 -1.3801 13.4401 22 6 1.9502 -2.6632 10.4018 23 7 2.4514 -2.3321 2.6294 24 6 1.9290 -2.1027 1.4433 25 6 1.4321 -3.1302 0.4945 26 6 0.3264 -2.8627 -0.3098 27 6 -0.1286 -3.8201 -1.1937 28 6 0.5049 -5.0470 -1.2747 29 6 1.5995 -5.3201 -0.4743 30 6 2.0661 -4.3680 0.4093 31 1 -0.3934 0.4417 0.7651 32 1 1.7923 -0.5138 -0.8900 33 1 3.5345 1.7703 0.0321 34 1 1.5615 2.4679 -1.2085 35 1 2.6035 0.9355 2.4737 36 1 3.4638 0.1661 4.7328 37 1 4.3904 -1.3406 4.5342 38 1 3.7129 -1.0472 7.1261 39 1 2.0001 -3.2242 7.6774 40 1 1.0735 -1.7174 7.8754 41 1 3.0915 0.1250 9.9277 42 1 1.3421 -0.2370 9.5965 43 1 -0.1285 0.1744 10.7637 44 1 -0.7073 -0.9004 14.7836 45 1 0.8945 -2.8309 10.1883 46 1 2.4556 -3.5573 10.7666 47 1 -0.1713 -1.9064 -0.2446 48 1 -0.9828 -3.6121 -1.8210 49 1 0.1432 -5.7948 -1.9650 50 1 2.0901 -6.2799 -0.5412 51 1 2.9210 -4.5820 1.0335 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567722_12622748.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:28:04 Heat of formation + Delta-G solvation = 175.123739 kcal Electronic energy + Delta-G solvation = -35205.956915 eV Core-core repulsion = 30498.259165 eV Total energy + Delta-G solvation = -4707.697750 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.174 amu Computer time = 4.77 seconds Orbital eigenvalues (eV) -43.15801 -42.46910 -41.09860 -40.15315 -39.56413 -37.76583 -35.94114 -34.78533 -33.54789 -32.30280 -32.14515 -31.74536 -31.33616 -29.81596 -28.17711 -27.32658 -25.98586 -25.17651 -23.93232 -23.30147 -23.00197 -22.49300 -21.96745 -21.46754 -20.96681 -20.63955 -19.03771 -18.57237 -18.16600 -17.68821 -17.48803 -17.24549 -16.88851 -16.74037 -16.37600 -16.19321 -16.07762 -15.95501 -15.70103 -15.45775 -15.33860 -15.22452 -14.90143 -14.65408 -14.42062 -14.16430 -14.04846 -13.97231 -13.93994 -13.82923 -13.66313 -13.51033 -13.29028 -12.94634 -12.60402 -12.42115 -12.32646 -12.13312 -12.00036 -11.96756 -11.84197 -11.44198 -11.27208 -10.98122 -10.78531 -10.66435 -10.59162 -10.34809 -10.27706 -9.68947 -9.63685 -9.16052 -5.09698 0.25985 0.60771 0.70018 0.80113 1.16381 1.22285 1.33539 1.36848 1.60789 1.87542 1.88938 1.98536 2.01191 2.77139 2.92035 3.09041 3.16561 3.24167 3.27760 3.32314 3.43816 3.52069 3.59589 3.66143 3.70692 3.77712 3.85229 3.96198 4.02600 4.12395 4.18692 4.23232 4.26864 4.27126 4.38243 4.43477 4.45153 4.48376 4.52070 4.62331 4.63599 4.76892 4.84130 4.84854 4.94048 5.11360 5.16204 5.28755 5.36755 5.44271 5.44584 5.76059 5.76663 5.78697 5.83387 5.84772 6.16979 6.24909 6.64368 6.69232 6.95871 7.10405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.028 4.028 3 Si 0.685 3.315 4 C -0.251 4.251 5 C 0.064 3.936 6 N -0.360 5.360 7 C 0.117 3.883 8 C 0.498 3.502 9 O -0.501 6.501 10 N -0.730 5.730 11 C 0.134 3.866 12 C -0.118 4.118 13 H 0.110 0.890 14 C -0.140 4.140 15 C 0.133 3.867 16 H 0.128 0.872 17 N -0.371 5.371 18 C 0.253 3.747 19 N -0.544 5.544 20 C 0.199 3.801 21 N -0.319 5.319 22 C -0.135 4.135 23 N -0.251 5.251 24 C 0.134 3.866 25 C -0.023 4.023 26 C -0.099 4.099 27 C -0.125 4.125 28 C -0.112 4.112 29 C -0.127 4.127 30 C -0.092 4.092 31 H 0.378 0.622 32 H 0.113 0.887 33 H -0.256 1.256 34 H -0.253 1.253 35 H 0.181 0.819 36 H 0.130 0.870 37 H 0.117 0.883 38 H 0.402 0.598 39 H 0.075 0.925 40 H 0.073 0.927 41 H 0.091 0.909 42 H 0.097 0.903 43 H 0.216 0.784 44 H 0.218 0.782 45 H 0.095 0.905 46 H 0.088 0.912 47 H 0.157 0.843 48 H 0.125 0.875 49 H 0.122 0.878 50 H 0.123 0.877 51 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.063 4.957 1.608 7.266 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.140 4.140 3 Si 0.587 3.413 4 C -0.263 4.263 5 C -0.081 4.081 6 N -0.141 5.141 7 C -0.009 4.009 8 C 0.281 3.719 9 O -0.373 6.373 10 N -0.385 5.385 11 C 0.010 3.990 12 C -0.137 4.137 13 H 0.128 0.872 14 C -0.178 4.178 15 C 0.030 3.970 16 H 0.146 0.854 17 N -0.161 5.161 18 C -0.044 4.044 19 N -0.271 5.271 20 C -0.104 4.104 21 N -0.146 5.146 22 C -0.174 4.174 23 N -0.071 5.071 24 C -0.032 4.032 25 C -0.025 4.025 26 C -0.118 4.118 27 C -0.143 4.143 28 C -0.131 4.131 29 C -0.145 4.145 30 C -0.112 4.112 31 H 0.226 0.774 32 H 0.130 0.870 33 H -0.181 1.181 34 H -0.178 1.178 35 H 0.197 0.803 36 H 0.147 0.853 37 H 0.135 0.865 38 H 0.237 0.763 39 H 0.094 0.906 40 H 0.091 0.909 41 H 0.109 0.891 42 H 0.115 0.885 43 H 0.232 0.768 44 H 0.235 0.765 45 H 0.113 0.887 46 H 0.107 0.893 47 H 0.174 0.826 48 H 0.143 0.857 49 H 0.140 0.860 50 H 0.141 0.859 51 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 5.489 3.706 1.888 6.887 hybrid contribution 0.486 0.198 -0.557 0.765 sum 5.975 3.904 1.331 7.260 Atomic orbital electron populations 1.86381 1.17735 1.80985 1.49421 1.24297 0.84520 1.09051 0.96094 0.95299 0.80663 0.77463 0.87922 1.20444 1.13290 0.93294 0.99281 1.22210 1.00328 0.95223 0.90296 1.47836 1.48792 1.04415 1.13063 1.21494 0.97109 1.03493 0.78816 1.20545 0.86719 0.81395 0.83238 1.90861 1.24866 1.41001 1.80589 1.45863 1.28524 1.57892 1.06173 1.21312 0.94117 0.98795 0.84732 1.22617 1.01388 0.96445 0.93294 0.87230 1.23582 1.03890 0.97527 0.92825 1.23000 0.88347 0.97124 0.88537 0.85446 1.50566 1.18603 1.38025 1.08950 1.25965 0.84646 0.93496 1.00281 1.70596 1.31008 1.25874 0.99626 1.26099 0.90855 0.93646 0.99772 1.78085 1.20327 1.24421 0.91772 1.23450 1.02349 0.97598 0.94039 1.77789 1.19205 1.01661 1.08446 1.20636 0.97921 0.92402 0.92219 1.17800 0.96782 0.92044 0.95856 1.21943 0.94915 1.01085 0.93867 1.21148 1.00342 0.93655 0.99165 1.21302 0.95737 0.97129 0.98887 1.21076 0.97353 0.99332 0.96782 1.21208 0.99670 0.92389 0.97913 0.77394 0.86962 1.18114 1.17796 0.80262 0.85266 0.86502 0.76324 0.90646 0.90871 0.89066 0.88478 0.76813 0.76544 0.88678 0.89291 0.82617 0.85713 0.86005 0.85870 0.85994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.08 10.10 -35.23 -0.36 -0.27 16 2 C -0.03 0.00 2.00 36.01 0.07 0.07 16 3 Si 0.68 -1.30 30.74 -169.99 -5.23 -6.52 16 4 C -0.25 -0.31 5.34 -104.76 -0.56 -0.87 16 5 C 0.06 -0.06 9.96 -17.26 -0.17 -0.23 16 6 N -0.36 -0.23 3.40 -62.58 -0.21 -0.45 16 7 C 0.12 -0.44 6.98 -5.19 -0.04 -0.47 16 8 C 0.50 -0.56 7.86 -10.98 -0.09 -0.65 16 9 O -0.50 -2.33 15.71 5.56 0.09 -2.24 16 10 N -0.73 3.43 5.56 -60.29 -0.33 3.10 16 11 C 0.13 -0.53 5.50 -4.04 -0.02 -0.55 16 12 C -0.12 0.73 3.75 -89.81 -0.34 0.39 16 13 H 0.11 -0.81 8.14 -51.93 -0.42 -1.23 16 14 C -0.14 0.88 7.00 -25.92 -0.18 0.70 16 15 C 0.13 -0.48 5.07 -67.12 -0.34 -0.82 16 16 H 0.13 -0.50 8.14 -51.93 -0.42 -0.92 16 17 N -0.37 0.02 3.83 -55.32 -0.21 -0.20 16 18 C 0.25 -0.04 11.87 -90.65 -1.08 -1.12 16 19 N -0.54 -1.49 11.19 -15.83 -0.18 -1.67 16 20 C 0.20 0.42 13.03 -91.81 -1.20 -0.77 16 21 N -0.32 -0.88 12.70 29.29 0.37 -0.51 16 22 C -0.14 0.56 7.44 -25.92 -0.19 0.37 16 23 N -0.25 -1.17 11.65 33.43 0.39 -0.78 16 24 C 0.13 0.57 6.74 -82.78 -0.56 0.01 16 25 C -0.02 -0.10 5.80 -104.89 -0.61 -0.71 16 26 C -0.10 -0.36 8.95 -39.26 -0.35 -0.72 16 27 C -0.13 -0.34 10.03 -39.63 -0.40 -0.74 16 28 C -0.11 -0.27 10.04 -39.52 -0.40 -0.66 16 29 C -0.13 -0.36 10.03 -39.63 -0.40 -0.75 16 30 C -0.09 -0.37 9.75 -39.26 -0.38 -0.76 16 31 H 0.38 -1.41 8.70 45.56 0.40 -1.01 16 32 H 0.11 0.14 7.84 -51.93 -0.41 -0.27 16 33 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 34 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 35 H 0.18 -0.99 6.40 -52.49 -0.34 -1.32 16 36 H 0.13 -1.06 8.07 -51.93 -0.42 -1.47 16 37 H 0.12 -0.65 8.14 -51.93 -0.42 -1.07 16 38 H 0.40 -3.27 8.47 -40.82 -0.35 -3.61 16 39 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 40 H 0.07 -0.21 7.88 -51.93 -0.41 -0.62 16 41 H 0.09 -0.67 8.14 -51.93 -0.42 -1.09 16 42 H 0.10 -0.63 6.18 -51.93 -0.32 -0.95 16 43 H 0.22 -0.91 6.75 -52.49 -0.35 -1.26 16 44 H 0.22 -0.22 8.06 -52.49 -0.42 -0.65 16 45 H 0.09 -0.28 8.10 -51.93 -0.42 -0.70 16 46 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 47 H 0.16 0.48 4.52 -52.49 -0.24 0.25 16 48 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 49 H 0.12 0.04 8.06 -52.48 -0.42 -0.39 16 50 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 51 H 0.12 0.44 8.06 -52.49 -0.42 0.02 16 LS Contribution 428.28 15.07 6.45 6.45 Total: 0.00 -16.22 428.28 -13.14 -29.36 By element: Atomic # 1 Polarization: -11.29 SS G_CDS: -6.70 Total: -17.99 kcal Atomic # 6 Polarization: -1.07 SS G_CDS: -7.22 Total: -8.29 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -0.18 Total: -0.50 kcal Atomic # 8 Polarization: -2.24 SS G_CDS: -0.27 Total: -2.51 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.23 Total: -6.52 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -16.22 -13.14 -29.36 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_12622748.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 204.484 kcal (2) G-P(sol) polarization free energy of solvation -16.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 188.261 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.137 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.361 kcal (6) G-S(sol) free energy of system = (1) + (5) 175.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.77 seconds