Wall clock time and date at job start Sun Mar 7 2021 07:29:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86304 * 109.47368 * 2 1 4 4 C 1.50699 * 109.47469 * 120.00079 * 2 1 3 5 5 C 1.38241 * 119.97375 * 245.02470 * 4 2 1 6 6 C 1.38292 * 120.11138 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05642 * 359.75947 * 6 5 4 8 8 C 1.38755 * 119.93876 * 0.51452 * 7 6 5 9 9 O 1.35904 * 120.05031 * 179.74049 * 8 7 6 10 10 C 1.42896 * 117.00080 * 359.72766 * 9 8 7 11 11 C 1.52996 * 109.47260 * 179.97438 * 10 9 8 12 12 C 1.50702 * 109.47592 * 179.97438 * 11 10 9 13 13 O 1.21282 * 119.99684 * 359.97438 * 12 11 10 14 14 N 1.34769 * 120.00461 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00237 * 180.02562 * 14 12 11 16 16 C 1.53006 * 109.46998 * 180.02562 * 15 14 12 17 17 H 1.08998 * 112.84948 * 45.33188 * 16 15 14 18 18 C 1.53780 * 113.61053 * 176.52669 * 16 15 14 19 19 C 1.53789 * 87.07893 * 139.97929 * 18 16 15 20 20 H 1.08997 * 113.60992 * 89.11735 * 19 18 16 21 21 N 1.46492 * 113.61517 * 219.93494 * 19 18 16 22 22 C 1.34435 * 126.82302 * 84.71425 * 21 19 18 23 23 N 1.30838 * 108.07288 * 179.89155 * 22 21 19 24 24 C 1.33242 * 109.83207 * 0.38087 * 23 22 21 25 25 N 1.30715 * 108.94489 * 359.76307 * 24 23 22 26 26 C 1.53777 * 113.61386 * 274.13314 * 16 15 14 27 27 C 1.38169 * 119.97280 * 64.99509 * 4 2 1 28 28 H 0.96700 * 114.00281 * 300.00228 * 1 2 3 29 29 H 1.09003 * 109.47155 * 239.99817 * 2 1 3 30 30 H 1.48504 * 109.99768 * 299.99904 * 3 2 1 31 31 H 1.48492 * 109.99883 * 61.32034 * 3 2 1 32 32 H 1.08000 * 119.94174 * 359.96979 * 5 4 2 33 33 H 1.08000 * 119.96639 * 180.02562 * 6 5 4 34 34 H 1.07996 * 120.02593 * 180.28065 * 7 6 5 35 35 H 1.09004 * 109.47251 * 59.99775 * 10 9 8 36 36 H 1.09000 * 109.47075 * 299.99668 * 10 9 8 37 37 H 1.08996 * 109.47261 * 59.99484 * 11 10 9 38 38 H 1.09004 * 109.47368 * 299.99868 * 11 10 9 39 39 H 0.97010 * 119.99854 * 0.02562 * 14 12 11 40 40 H 1.08993 * 109.47452 * 60.00368 * 15 14 12 41 41 H 1.09000 * 109.47175 * 300.00158 * 15 14 12 42 42 H 1.08992 * 113.61837 * 254.52753 * 18 16 15 43 43 H 1.09001 * 113.61413 * 25.43567 * 18 16 15 44 44 H 1.07995 * 125.96084 * 0.03129 * 22 21 19 45 45 H 1.08001 * 125.52308 * 179.79965 * 24 23 22 46 46 H 1.08999 * 113.61825 * 334.57628 * 26 16 15 47 47 H 1.09009 * 113.61337 * 105.47075 * 26 16 15 48 48 H 1.08006 * 120.02437 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6383 -0.0116 2.1911 6 6 3.1002 -0.6606 3.3216 7 6 2.8518 -2.0081 3.4958 8 6 2.1474 -2.7129 2.5303 9 8 1.9063 -4.0400 2.6969 10 6 2.4125 -4.6468 3.8874 11 6 2.0450 -6.1320 3.8988 12 6 2.5794 -6.7722 5.1541 13 8 3.1940 -6.1062 5.9600 14 7 2.3742 -8.0847 5.3811 15 6 2.8932 -8.7069 6.6016 16 6 2.5258 -10.1922 6.6128 17 1 2.7093 -10.6808 5.6560 18 6 3.0987 -10.9593 7.8162 19 6 1.7549 -11.7043 7.8809 20 1 1.7264 -12.6071 7.2708 21 7 1.2712 -11.9247 9.2460 22 6 0.5648 -11.0640 9.9993 23 7 0.3258 -11.6350 11.1520 24 6 0.8683 -12.8517 11.1748 25 7 1.4584 -13.0748 10.0299 26 6 1.1302 -10.4771 7.1924 27 6 1.6845 -2.0595 1.3977 28 1 -0.3934 0.4417 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5615 2.4679 -1.2086 31 1 1.5880 2.4585 1.2242 32 1 2.8302 1.0429 2.0585 33 1 3.6519 -0.1123 4.0708 34 1 3.2089 -2.5134 4.3810 35 1 1.9756 -4.1582 4.7584 36 1 3.4969 -4.5403 3.9168 37 1 2.4815 -6.6209 3.0279 38 1 0.9606 -6.2382 3.8696 39 1 1.8829 -8.6175 4.7362 40 1 2.4570 -8.2178 7.4725 41 1 3.9777 -8.6010 6.6306 42 1 3.9422 -11.6015 7.5632 43 1 3.2907 -10.3290 8.6845 44 1 0.2479 -10.0748 9.7037 45 1 0.8266 -13.5419 12.0044 46 1 0.7830 -9.7148 7.8898 47 1 0.3869 -10.7306 6.4365 48 1 1.1321 -2.6050 0.6469 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567722_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:29:56 Heat of formation + Delta-G solvation = 44.315290 kcal Electronic energy + Delta-G solvation = -29735.370187 eV Core-core repulsion = 25374.385827 eV Total energy + Delta-G solvation = -4360.984360 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -43.14851 -41.44866 -41.05124 -40.20225 -39.12425 -37.34968 -35.94574 -33.71927 -33.25532 -32.46843 -32.14315 -30.92461 -29.21389 -27.32064 -27.01935 -25.77502 -24.63413 -23.67131 -22.99544 -22.48596 -22.11904 -21.56692 -20.67227 -19.39167 -18.71283 -18.09509 -17.75472 -17.60493 -17.37508 -17.12369 -17.09479 -16.79151 -16.43536 -16.23234 -16.13191 -15.93971 -15.47827 -15.24151 -14.98729 -14.92251 -14.70231 -14.40426 -14.12568 -14.07253 -13.93667 -13.78747 -13.56402 -13.25000 -12.99626 -12.93792 -12.87293 -12.58711 -12.40695 -12.11709 -11.98897 -11.91212 -11.85641 -11.54337 -11.12321 -10.97495 -10.77810 -10.64303 -10.63052 -10.33880 -9.92487 -9.23936 -4.95107 0.22603 0.42305 0.61325 1.21770 1.26638 1.41396 1.59316 1.60738 1.95967 2.01596 2.35264 2.68285 2.79596 2.94583 3.20141 3.26468 3.33167 3.37905 3.43371 3.62512 3.66289 3.74878 3.78837 3.85689 3.89721 3.97435 4.03690 4.05508 4.19678 4.21258 4.24320 4.29294 4.31538 4.38382 4.45961 4.51690 4.52553 4.53043 4.57956 4.62912 4.70271 4.85497 4.98526 5.14749 5.27635 5.29342 5.39205 5.44822 5.45776 5.69338 5.77247 6.18617 6.36805 6.39789 6.96278 7.10912 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.076 4.076 3 Si 0.690 3.310 4 C -0.080 4.080 5 C -0.156 4.156 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.074 3.926 11 C -0.141 4.141 12 C 0.520 3.480 13 O -0.537 6.537 14 N -0.729 5.729 15 C 0.131 3.869 16 C -0.119 4.119 17 H 0.110 0.890 18 C -0.135 4.135 19 C 0.132 3.868 20 H 0.128 0.872 21 N -0.370 5.370 22 C 0.253 3.747 23 N -0.545 5.545 24 C 0.199 3.801 25 N -0.320 5.320 26 C -0.140 4.140 27 C -0.125 4.125 28 H 0.376 0.624 29 H 0.120 0.880 30 H -0.257 1.257 31 H -0.260 1.260 32 H 0.129 0.871 33 H 0.130 0.870 34 H 0.132 0.868 35 H 0.072 0.928 36 H 0.073 0.927 37 H 0.108 0.892 38 H 0.108 0.892 39 H 0.404 0.596 40 H 0.073 0.927 41 H 0.076 0.924 42 H 0.089 0.911 43 H 0.095 0.905 44 H 0.216 0.784 45 H 0.218 0.782 46 H 0.097 0.903 47 H 0.091 0.909 48 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.608 -0.987 -2.871 3.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.591 3.409 4 C -0.081 4.081 5 C -0.174 4.174 6 C -0.091 4.091 7 C -0.220 4.220 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.181 4.181 12 C 0.306 3.694 13 O -0.413 6.413 14 N -0.381 5.381 15 C 0.007 3.993 16 C -0.138 4.138 17 H 0.128 0.872 18 C -0.174 4.174 19 C 0.030 3.970 20 H 0.146 0.854 21 N -0.161 5.161 22 C -0.044 4.044 23 N -0.271 5.271 24 C -0.104 4.104 25 N -0.146 5.146 26 C -0.179 4.179 27 C -0.144 4.144 28 H 0.224 0.776 29 H 0.138 0.862 30 H -0.182 1.182 31 H -0.185 1.185 32 H 0.146 0.854 33 H 0.148 0.852 34 H 0.150 0.850 35 H 0.090 0.910 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.239 0.761 40 H 0.092 0.908 41 H 0.094 0.906 42 H 0.107 0.893 43 H 0.113 0.887 44 H 0.232 0.768 45 H 0.235 0.765 46 H 0.115 0.885 47 H 0.109 0.891 48 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.044 -0.655 -2.917 3.622 hybrid contribution -1.202 -0.418 0.385 1.330 sum 0.842 -1.074 -2.532 2.876 Atomic orbital electron populations 1.86608 1.17554 1.80009 1.49296 1.25073 0.84070 1.11124 0.98292 0.94840 0.91703 0.74211 0.80100 1.20060 0.97991 0.93607 0.96407 1.20983 1.01370 0.99942 0.95084 1.20933 0.97539 0.93675 0.96978 1.21398 1.04187 0.95973 1.00473 1.18950 0.95239 0.82618 0.94518 1.85973 1.74479 1.20310 1.42264 1.22411 0.99729 0.91784 0.86225 1.21465 1.04277 0.95122 0.97275 1.20303 0.79553 0.81991 0.87514 1.90770 1.40612 1.62433 1.47504 1.45920 1.58401 1.09763 1.24062 1.21338 1.00015 0.90608 0.87306 1.22621 0.96118 0.95380 0.99685 0.87226 1.23446 0.96978 0.98569 0.98384 1.23038 0.95948 0.99525 0.78534 0.85435 1.50561 1.40759 1.11415 1.13358 1.25969 0.93081 0.98043 0.87294 1.70602 1.26763 1.08824 1.20957 1.26096 0.94207 0.93898 0.96166 1.78086 1.25247 1.05967 1.05324 1.23617 0.97712 0.96238 1.00318 1.20246 1.03200 0.93698 0.97229 0.77604 0.86246 1.18224 1.18513 0.85390 0.85167 0.84982 0.90956 0.90866 0.87384 0.87415 0.76119 0.90845 0.90609 0.89276 0.88671 0.76816 0.76544 0.88489 0.89052 0.84856 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.76 12.83 -35.23 -0.45 -1.21 16 2 C -0.08 0.00 2.80 36.01 0.10 0.10 16 3 Si 0.69 -0.63 29.88 -169.99 -5.08 -5.71 16 4 C -0.08 -0.05 5.35 -104.65 -0.56 -0.61 16 5 C -0.16 0.00 8.67 -39.56 -0.34 -0.35 16 6 C -0.07 -0.01 10.04 -39.60 -0.40 -0.40 16 7 C -0.20 -0.18 9.04 -39.43 -0.36 -0.54 16 8 C 0.13 0.23 6.69 -39.22 -0.26 -0.03 16 9 O -0.32 -0.41 10.14 -19.44 -0.20 -0.60 16 10 C 0.07 -0.03 4.03 37.16 0.15 0.11 16 11 C -0.14 0.41 6.07 -27.88 -0.17 0.24 16 12 C 0.52 -0.64 7.83 -10.99 -0.09 -0.72 16 13 O -0.54 -1.64 15.98 5.56 0.09 -1.55 16 14 N -0.73 2.98 5.56 -60.29 -0.33 2.64 16 15 C 0.13 -0.51 5.50 -4.04 -0.02 -0.53 16 16 C -0.12 0.70 3.75 -89.81 -0.34 0.36 16 17 H 0.11 -0.76 8.14 -51.93 -0.42 -1.19 16 18 C -0.13 0.56 7.44 -25.92 -0.19 0.36 16 19 C 0.13 -0.44 5.06 -67.03 -0.34 -0.78 16 20 H 0.13 -0.46 8.14 -51.93 -0.42 -0.88 16 21 N -0.37 -0.06 3.83 -55.23 -0.21 -0.27 16 22 C 0.25 0.02 11.88 -90.64 -1.08 -1.06 16 23 N -0.54 -1.60 11.19 -15.83 -0.18 -1.78 16 24 C 0.20 0.45 13.03 -91.81 -1.20 -0.74 16 25 N -0.32 -0.93 12.70 29.29 0.37 -0.56 16 26 C -0.14 0.81 7.02 -25.83 -0.18 0.63 16 27 C -0.13 -0.21 9.62 -39.44 -0.38 -0.59 16 28 H 0.38 -0.51 8.70 45.56 0.40 -0.11 16 29 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 30 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 31 H -0.26 -0.25 7.01 56.52 0.40 0.14 16 32 H 0.13 -0.21 4.83 -52.49 -0.25 -0.46 16 33 H 0.13 -0.25 8.06 -52.49 -0.42 -0.67 16 34 H 0.13 -0.01 6.30 -52.49 -0.33 -0.34 16 35 H 0.07 0.00 7.61 -51.93 -0.40 -0.40 16 36 H 0.07 -0.01 7.63 -51.93 -0.40 -0.40 16 37 H 0.11 -0.47 8.14 -51.93 -0.42 -0.89 16 38 H 0.11 -0.46 8.14 -51.93 -0.42 -0.89 16 39 H 0.40 -2.76 8.47 -40.82 -0.35 -3.10 16 40 H 0.07 -0.22 7.88 -51.93 -0.41 -0.62 16 41 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 42 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 43 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 44 H 0.22 -0.84 6.76 -52.49 -0.35 -1.19 16 45 H 0.22 -0.20 8.06 -52.49 -0.42 -0.62 16 46 H 0.10 -0.58 6.18 -51.93 -0.32 -0.90 16 47 H 0.09 -0.60 8.14 -51.92 -0.42 -1.02 16 48 H 0.13 0.20 8.06 -52.48 -0.42 -0.23 16 LS Contribution 401.62 15.07 6.05 6.05 Total: 0.00 -11.86 401.62 -12.26 -24.12 By element: Atomic # 1 Polarization: -9.92 SS G_CDS: -6.68 Total: -16.59 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -5.65 Total: -4.54 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.35 Total: 0.03 kcal Atomic # 8 Polarization: -2.81 SS G_CDS: -0.56 Total: -3.37 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.08 Total: -5.71 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -11.86 -12.26 -24.12 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.434 kcal (2) G-P(sol) polarization free energy of solvation -11.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.578 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.262 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.119 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.315 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds