Wall clock time and date at job start Sun Mar 7 2021 07:29:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86304 * 109.47368 * 2 1 4 4 C 1.50699 * 109.47469 * 120.00079 * 2 1 3 5 5 C 1.38241 * 119.97375 * 245.02470 * 4 2 1 6 6 C 1.38292 * 120.11138 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05642 * 359.75947 * 6 5 4 8 8 C 1.38755 * 119.93876 * 0.51452 * 7 6 5 9 9 O 1.35904 * 120.05031 * 179.74049 * 8 7 6 10 10 C 1.42896 * 117.00080 * 359.72766 * 9 8 7 11 11 C 1.52996 * 109.47260 * 179.97438 * 10 9 8 12 12 C 1.50702 * 109.47592 * 179.97438 * 11 10 9 13 13 O 1.21282 * 119.99684 * 359.97438 * 12 11 10 14 14 N 1.34769 * 120.00461 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00237 * 180.02562 * 14 12 11 16 16 C 1.53006 * 109.46998 * 180.02562 * 15 14 12 17 17 H 1.08998 * 112.84948 * 45.33188 * 16 15 14 18 18 C 1.53780 * 113.61053 * 176.52669 * 16 15 14 19 19 C 1.53789 * 87.07893 * 139.97929 * 18 16 15 20 20 H 1.08997 * 113.60992 * 89.11735 * 19 18 16 21 21 N 1.46492 * 113.61517 * 219.93494 * 19 18 16 22 22 C 1.34435 * 126.82302 * 84.71425 * 21 19 18 23 23 N 1.30838 * 108.07288 * 179.89155 * 22 21 19 24 24 C 1.33242 * 109.83207 * 0.38087 * 23 22 21 25 25 N 1.30715 * 108.94489 * 359.76307 * 24 23 22 26 26 C 1.53777 * 113.61386 * 274.13314 * 16 15 14 27 27 C 1.38169 * 119.97280 * 64.99509 * 4 2 1 28 28 H 0.96700 * 114.00281 * 300.00228 * 1 2 3 29 29 H 1.09003 * 109.47155 * 239.99817 * 2 1 3 30 30 H 1.48504 * 109.99768 * 299.99904 * 3 2 1 31 31 H 1.48492 * 109.99883 * 61.32034 * 3 2 1 32 32 H 1.08000 * 119.94174 * 359.96979 * 5 4 2 33 33 H 1.08000 * 119.96639 * 180.02562 * 6 5 4 34 34 H 1.07996 * 120.02593 * 180.28065 * 7 6 5 35 35 H 1.09004 * 109.47251 * 59.99775 * 10 9 8 36 36 H 1.09000 * 109.47075 * 299.99668 * 10 9 8 37 37 H 1.08996 * 109.47261 * 59.99484 * 11 10 9 38 38 H 1.09004 * 109.47368 * 299.99868 * 11 10 9 39 39 H 0.97010 * 119.99854 * 0.02562 * 14 12 11 40 40 H 1.08993 * 109.47452 * 60.00368 * 15 14 12 41 41 H 1.09000 * 109.47175 * 300.00158 * 15 14 12 42 42 H 1.08992 * 113.61837 * 254.52753 * 18 16 15 43 43 H 1.09001 * 113.61413 * 25.43567 * 18 16 15 44 44 H 1.07995 * 125.96084 * 0.03129 * 22 21 19 45 45 H 1.08001 * 125.52308 * 179.79965 * 24 23 22 46 46 H 1.08999 * 113.61825 * 334.57628 * 26 16 15 47 47 H 1.09009 * 113.61337 * 105.47075 * 26 16 15 48 48 H 1.08006 * 120.02437 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6383 -0.0116 2.1911 6 6 3.1002 -0.6606 3.3216 7 6 2.8518 -2.0081 3.4958 8 6 2.1474 -2.7129 2.5303 9 8 1.9063 -4.0400 2.6969 10 6 2.4125 -4.6468 3.8874 11 6 2.0450 -6.1320 3.8988 12 6 2.5794 -6.7722 5.1541 13 8 3.1940 -6.1062 5.9600 14 7 2.3742 -8.0847 5.3811 15 6 2.8932 -8.7069 6.6016 16 6 2.5258 -10.1922 6.6128 17 1 2.7093 -10.6808 5.6560 18 6 3.0987 -10.9593 7.8162 19 6 1.7549 -11.7043 7.8809 20 1 1.7264 -12.6071 7.2708 21 7 1.2712 -11.9247 9.2460 22 6 0.5648 -11.0640 9.9993 23 7 0.3258 -11.6350 11.1520 24 6 0.8683 -12.8517 11.1748 25 7 1.4584 -13.0748 10.0299 26 6 1.1302 -10.4771 7.1924 27 6 1.6845 -2.0595 1.3977 28 1 -0.3934 0.4417 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5615 2.4679 -1.2086 31 1 1.5880 2.4585 1.2242 32 1 2.8302 1.0429 2.0585 33 1 3.6519 -0.1123 4.0708 34 1 3.2089 -2.5134 4.3810 35 1 1.9756 -4.1582 4.7584 36 1 3.4969 -4.5403 3.9168 37 1 2.4815 -6.6209 3.0279 38 1 0.9606 -6.2382 3.8696 39 1 1.8829 -8.6175 4.7362 40 1 2.4570 -8.2178 7.4725 41 1 3.9777 -8.6010 6.6306 42 1 3.9422 -11.6015 7.5632 43 1 3.2907 -10.3290 8.6845 44 1 0.2479 -10.0748 9.7037 45 1 0.8266 -13.5419 12.0044 46 1 0.7830 -9.7148 7.8898 47 1 0.3869 -10.7306 6.4365 48 1 1.1321 -2.6050 0.6469 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567722_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:29:55 Heat of formation + Delta-G solvation = 43.686065 kcal Electronic energy + Delta-G solvation = -29735.397472 eV Core-core repulsion = 25374.385827 eV Total energy + Delta-G solvation = -4361.011645 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -43.14004 -41.41183 -40.93138 -40.00235 -39.13539 -37.38567 -35.80018 -33.64608 -33.17187 -32.49118 -32.18967 -30.91634 -29.02462 -27.01939 -26.94305 -25.67396 -24.52844 -23.68792 -22.97941 -22.36443 -22.08318 -21.44343 -20.38846 -19.37206 -18.58175 -18.05966 -17.70673 -17.51463 -17.15710 -17.10842 -16.96013 -16.76951 -16.36638 -16.17930 -16.10383 -15.83050 -15.49175 -15.18316 -14.92376 -14.77170 -14.61749 -14.39477 -14.12978 -13.98102 -13.64496 -13.57994 -13.37465 -13.22288 -12.94422 -12.89098 -12.83181 -12.39612 -12.24109 -11.96246 -11.80877 -11.79618 -11.67332 -11.56336 -11.07895 -11.03272 -10.86853 -10.65405 -10.57244 -10.14445 -9.95645 -9.27717 -4.89895 0.19389 0.38996 0.61136 1.29878 1.34722 1.54079 1.62018 1.72364 1.94443 1.96917 2.49223 2.65370 3.10226 3.29464 3.41968 3.42588 3.52535 3.58831 3.64376 3.66315 3.84946 3.85423 3.90385 4.00061 4.09361 4.13237 4.17817 4.23225 4.28470 4.29708 4.41048 4.54828 4.57119 4.61060 4.64502 4.68262 4.71577 4.78139 4.78574 4.87543 4.93862 4.97819 5.14504 5.25615 5.34568 5.37700 5.40534 5.43787 5.44579 5.70036 5.87378 6.32973 6.47373 6.47625 7.07122 7.17549 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.086 4.086 3 Si 0.774 3.226 4 C -0.081 4.081 5 C -0.159 4.159 6 C -0.076 4.076 7 C -0.210 4.210 8 C 0.117 3.883 9 O -0.324 6.324 10 C 0.073 3.927 11 C -0.133 4.133 12 C 0.519 3.481 13 O -0.586 6.586 14 N -0.712 5.712 15 C 0.131 3.869 16 C -0.099 4.099 17 H 0.130 0.870 18 C -0.136 4.136 19 C 0.119 3.881 20 H 0.131 0.869 21 N -0.368 5.368 22 C 0.255 3.745 23 N -0.582 5.582 24 C 0.188 3.812 25 N -0.354 5.354 26 C -0.129 4.129 27 C -0.140 4.140 28 H 0.386 0.614 29 H 0.125 0.875 30 H -0.302 1.302 31 H -0.281 1.281 32 H 0.146 0.854 33 H 0.151 0.849 34 H 0.137 0.863 35 H 0.063 0.937 36 H 0.065 0.935 37 H 0.127 0.873 38 H 0.127 0.873 39 H 0.421 0.579 40 H 0.064 0.936 41 H 0.061 0.939 42 H 0.087 0.913 43 H 0.083 0.917 44 H 0.250 0.750 45 H 0.235 0.765 46 H 0.101 0.899 47 H 0.109 0.891 48 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.417 -0.855 -3.815 4.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.194 4.194 3 Si 0.679 3.321 4 C -0.082 4.082 5 C -0.176 4.176 6 C -0.094 4.094 7 C -0.229 4.229 8 C 0.072 3.928 9 O -0.238 6.238 10 C -0.003 4.003 11 C -0.172 4.172 12 C 0.306 3.694 13 O -0.467 6.467 14 N -0.365 5.365 15 C 0.008 3.992 16 C -0.118 4.118 17 H 0.148 0.852 18 C -0.175 4.175 19 C 0.018 3.982 20 H 0.149 0.851 21 N -0.159 5.159 22 C -0.041 4.041 23 N -0.310 5.310 24 C -0.114 4.114 25 N -0.181 5.181 26 C -0.167 4.167 27 C -0.159 4.159 28 H 0.235 0.765 29 H 0.143 0.857 30 H -0.231 1.231 31 H -0.207 1.207 32 H 0.163 0.837 33 H 0.169 0.831 34 H 0.154 0.846 35 H 0.082 0.918 36 H 0.083 0.917 37 H 0.145 0.855 38 H 0.145 0.855 39 H 0.259 0.741 40 H 0.083 0.917 41 H 0.079 0.921 42 H 0.105 0.895 43 H 0.101 0.899 44 H 0.265 0.735 45 H 0.251 0.749 46 H 0.120 0.880 47 H 0.127 0.873 48 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.846 -0.579 -3.887 4.342 hybrid contribution -1.141 -0.449 0.651 1.388 sum 0.705 -1.028 -3.236 3.467 Atomic orbital electron populations 1.86574 1.18434 1.80467 1.50131 1.25325 0.83509 1.12198 0.98386 0.93877 0.90314 0.71505 0.76363 1.20147 0.97943 0.93315 0.96748 1.21204 1.00908 1.00744 0.94783 1.21239 0.97238 0.93473 0.97439 1.21552 1.04266 0.96529 1.00554 1.19133 0.95746 0.82998 0.94904 1.85953 1.74672 1.20238 1.42932 1.22459 0.99190 0.93244 0.85397 1.21438 1.05461 0.93314 0.97034 1.20587 0.78856 0.82542 0.87408 1.90753 1.43015 1.63706 1.49187 1.45796 1.57498 1.09013 1.24159 1.21295 0.99110 0.91759 0.87071 1.22502 0.95715 0.93715 0.99840 0.85211 1.23426 0.96723 0.98550 0.98820 1.23412 0.96881 1.00715 0.77219 0.85098 1.50763 1.40344 1.10611 1.14142 1.26600 0.92045 0.98899 0.86585 1.70582 1.28207 1.09480 1.22700 1.26519 0.93995 0.94245 0.96645 1.77992 1.26305 1.07823 1.06020 1.23628 0.97941 0.94791 1.00339 1.20337 1.03856 0.94311 0.97395 0.76453 0.85676 1.23067 1.20708 0.83691 0.83097 0.84558 0.91824 0.91682 0.85513 0.85512 0.74141 0.91730 0.92107 0.89470 0.89861 0.73473 0.74871 0.88022 0.87255 0.85327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.74 12.83 -148.98 -1.91 -3.65 16 2 C -0.09 0.01 2.80 71.24 0.20 0.21 16 3 Si 0.77 -1.66 29.88 68.60 2.05 0.39 16 4 C -0.08 -0.11 5.35 -19.88 -0.11 -0.21 16 5 C -0.16 0.09 8.67 22.28 0.19 0.29 16 6 C -0.08 0.02 10.04 22.26 0.22 0.24 16 7 C -0.21 -0.47 9.04 22.37 0.20 -0.27 16 8 C 0.12 0.50 6.69 22.50 0.15 0.65 16 9 O -0.32 -1.01 10.14 -92.47 -0.94 -1.95 16 10 C 0.07 -0.03 4.03 71.98 0.29 0.26 16 11 C -0.13 0.88 6.07 29.85 0.18 1.06 16 12 C 0.52 -1.42 7.83 87.66 0.69 -0.73 16 13 O -0.59 -4.14 15.98 -3.04 -0.05 -4.19 16 14 N -0.71 6.68 5.56 -463.06 -2.57 4.11 16 15 C 0.13 -1.09 5.50 86.38 0.47 -0.61 16 16 C -0.10 1.30 3.75 -10.27 -0.04 1.26 16 17 H 0.13 -2.15 8.14 -2.39 -0.02 -2.17 16 18 C -0.14 1.15 7.44 31.12 0.23 1.38 16 19 C 0.12 -0.86 5.06 45.58 0.23 -0.63 16 20 H 0.13 -1.03 8.14 -2.39 -0.02 -1.05 16 21 N -0.37 -0.17 3.83 -328.66 -1.26 -1.43 16 22 C 0.25 0.02 11.88 180.36 2.14 2.16 16 23 N -0.58 -3.83 11.19 -203.99 -2.28 -6.11 16 24 C 0.19 1.07 13.03 180.76 2.36 3.42 16 25 N -0.35 -2.40 12.70 -61.24 -0.78 -3.18 16 26 C -0.13 1.71 7.02 31.18 0.22 1.93 16 27 C -0.14 -0.56 9.62 22.36 0.22 -0.34 16 28 H 0.39 -0.94 8.70 -74.06 -0.64 -1.58 16 29 H 0.13 -0.20 7.96 -2.39 -0.02 -0.22 16 30 H -0.30 -1.66 7.11 99.48 0.71 -0.95 16 31 H -0.28 -0.35 7.01 99.48 0.70 0.35 16 32 H 0.15 -0.66 4.83 -2.91 -0.01 -0.67 16 33 H 0.15 -0.75 8.06 -2.91 -0.02 -0.77 16 34 H 0.14 0.09 6.30 -2.91 -0.02 0.08 16 35 H 0.06 0.07 7.61 -2.38 -0.02 0.05 16 36 H 0.06 0.06 7.63 -2.39 -0.02 0.05 16 37 H 0.13 -1.29 8.14 -2.39 -0.02 -1.31 16 38 H 0.13 -1.30 8.14 -2.39 -0.02 -1.32 16 39 H 0.42 -6.74 8.47 -92.70 -0.79 -7.52 16 40 H 0.06 -0.38 7.88 -2.39 -0.02 -0.40 16 41 H 0.06 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 43 H 0.08 -0.47 8.10 -2.39 -0.02 -0.49 16 44 H 0.25 -2.22 6.76 -2.91 -0.02 -2.23 16 45 H 0.24 -0.13 8.06 -2.91 -0.02 -0.15 16 46 H 0.10 -1.40 6.18 -2.39 -0.01 -1.42 16 47 H 0.11 -1.76 8.14 -2.38 -0.02 -1.78 16 48 H 0.13 0.53 8.06 -2.91 -0.02 0.50 16 Total: 0.00 -29.69 401.62 -0.28 -29.97 By element: Atomic # 1 Polarization: -23.62 SS G_CDS: -0.39 Total: -24.01 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: 7.85 Total: 10.06 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -6.89 Total: -6.61 kcal Atomic # 8 Polarization: -6.90 SS G_CDS: -2.90 Total: -9.79 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: 2.05 Total: 0.39 kcal Total: -29.69 -0.28 -29.97 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.654 kcal (2) G-P(sol) polarization free energy of solvation -29.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.968 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.282 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.968 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.686 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds