Wall clock time and date at job start Sun Mar 7 2021 07:30:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35996 * 116.99610 * 2 1 4 4 C 1.39155 * 120.07091 * 180.02562 * 3 2 1 5 5 O 1.35997 * 120.07240 * 359.97438 * 4 3 2 6 6 C 1.42899 * 116.99580 * 179.72844 * 5 4 3 7 7 C 1.50708 * 109.46744 * 180.02562 * 6 5 4 8 8 O 1.21279 * 120.00031 * 0.02562 * 7 6 5 9 9 N 1.34775 * 119.99902 * 180.02562 * 7 6 5 10 10 C 1.46495 * 120.00014 * 179.97438 * 9 7 6 11 11 C 1.53002 * 109.47010 * 179.97438 * 10 9 7 12 12 H 1.08999 * 112.84959 * 43.80996 * 11 10 9 13 13 C 1.53782 * 113.61350 * 174.99800 * 11 10 9 14 14 C 1.53783 * 87.08143 * 139.98553 * 13 11 10 15 15 H 1.08998 * 113.61053 * 89.20163 * 14 13 11 16 16 N 1.46495 * 113.61545 * 220.02092 * 14 13 11 17 17 C 1.34438 * 126.82233 * 85.00206 * 16 14 13 18 18 N 1.30831 * 108.07816 * 180.27730 * 17 16 14 19 19 C 1.33251 * 109.82578 * 359.59820 * 18 17 16 20 20 N 1.30712 * 108.94547 * 0.40841 * 19 18 17 21 21 C 1.53775 * 113.62028 * 272.49761 * 11 10 9 22 22 C 1.38564 * 119.85136 * 179.72303 * 4 3 2 23 23 C 1.38242 * 120.00001 * 0.27598 * 22 4 3 24 24 N 1.48011 * 119.92680 * 179.97438 * 23 22 4 25 25 O 1.21802 * 119.99402 * 359.97438 * 24 23 22 26 26 O 1.21801 * 119.99995 * 179.97438 * 24 23 22 27 27 C 1.38251 * 120.14876 * 359.97438 * 23 22 4 28 28 C 1.50693 * 119.92814 * 180.02562 * 27 23 22 29 29 O 1.42905 * 109.47106 * 75.00142 * 28 27 23 30 30 Si 1.86303 * 109.47397 * 194.99844 * 28 27 23 31 31 C 1.38246 * 120.14575 * 0.02562 * 27 23 22 32 32 H 1.09004 * 109.46486 * 180.02562 * 1 2 3 33 33 H 1.09000 * 109.47280 * 299.99535 * 1 2 3 34 34 H 1.08996 * 109.47074 * 60.00656 * 1 2 3 35 35 H 1.08994 * 109.47199 * 60.00463 * 6 5 4 36 36 H 1.09008 * 109.47115 * 299.99903 * 6 5 4 37 37 H 0.97003 * 119.99827 * 359.97438 * 9 7 6 38 38 H 1.09004 * 109.47107 * 60.00280 * 10 9 7 39 39 H 1.08995 * 109.47370 * 299.99871 * 10 9 7 40 40 H 1.09009 * 113.61422 * 25.43926 * 13 11 10 41 41 H 1.09001 * 113.61856 * 254.53778 * 13 11 10 42 42 H 1.08002 * 125.95849 * 0.02562 * 17 16 14 43 43 H 1.07996 * 125.52171 * 180.12701 * 19 18 17 44 44 H 1.09003 * 113.61153 * 105.46847 * 21 11 10 45 45 H 1.09002 * 113.61413 * 334.57610 * 21 11 10 46 46 H 1.07998 * 119.99849 * 180.29127 * 22 4 3 47 47 H 1.08996 * 109.47588 * 315.00060 * 28 27 23 48 48 H 0.96705 * 114.00014 * 180.02562 * 29 28 27 49 49 H 1.48498 * 109.99626 * 300.00376 * 30 28 27 50 50 H 1.48505 * 109.99576 * 61.31717 * 30 28 27 51 51 H 1.08000 * 120.00114 * 180.02562 * 31 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1478 -0.0005 6 6 5.6003 0.3009 -0.0071 7 6 6.2519 -1.0580 -0.0068 8 8 5.5671 -2.0590 -0.0018 9 7 7.5957 -1.1610 -0.0119 10 6 8.2292 -2.4819 -0.0109 11 6 9.7504 -2.3180 -0.0181 12 1 10.0966 -1.5500 0.6735 13 6 10.5137 -3.6473 0.1051 14 6 11.5008 -3.0860 -0.9320 15 1 12.3273 -2.5287 -0.4910 16 7 11.9436 -4.0761 -1.9167 17 6 11.3134 -4.4194 -3.0535 18 7 12.0261 -5.3397 -3.6508 19 6 13.1177 -5.6025 -2.9333 20 7 13.1102 -4.8559 -1.8603 21 6 10.3501 -2.1950 -1.4287 22 6 4.0602 2.5235 -0.0063 23 6 3.3027 3.6799 -0.0058 24 7 3.9712 5.0004 -0.0115 25 8 5.1874 5.0672 -0.0161 26 8 3.3052 6.0202 -0.0115 27 6 1.9222 3.6058 0.0000 28 6 1.1014 4.8696 -0.0001 29 8 1.1292 5.4555 -1.3032 30 14 -0.6579 4.4676 0.4627 31 6 1.2931 2.3748 0.0058 32 1 -0.3632 -1.0277 0.0005 33 1 -0.3634 0.5138 0.8900 34 1 -0.3633 0.5137 -0.8900 35 1 5.9103 0.8531 0.8799 36 1 5.9026 0.8482 -0.9001 37 1 8.1434 -0.3604 -0.0162 38 1 7.9194 -3.0340 -0.8983 39 1 7.9266 -3.0293 0.8817 40 1 9.9496 -4.5094 -0.2510 41 1 10.9569 -3.8069 1.0881 42 1 10.3795 -4.0100 -3.4094 43 1 13.8821 -6.3196 -3.1936 44 1 10.6612 -1.1819 -1.6841 45 1 9.7413 -2.6599 -2.2042 46 1 5.1384 2.5841 -0.0115 47 1 1.5158 5.5720 0.7230 48 1 0.6207 6.2748 -1.3770 49 1 -1.2343 3.5106 -0.5157 50 1 -0.7036 3.8868 1.8287 51 1 0.2145 2.3196 0.0099 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567722_4549636.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:30:20 Heat of formation + Delta-G solvation = 35.151215 kcal Electronic energy + Delta-G solvation = -39648.851992 eV Core-core repulsion = 34137.771621 eV Total energy + Delta-G solvation = -5511.080372 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.161 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -43.28178 -43.14878 -42.16785 -41.25882 -40.43701 -39.62005 -39.12138 -37.63728 -37.10447 -35.97622 -33.59210 -32.85513 -32.65275 -32.15034 -30.75753 -29.17731 -28.42899 -27.89092 -27.32023 -25.85336 -25.14274 -23.94921 -23.11248 -22.99738 -22.49785 -21.97083 -20.77358 -20.70951 -19.75824 -19.55260 -18.97698 -18.80760 -18.41052 -18.19225 -18.07632 -17.92130 -17.63224 -17.39038 -17.08116 -16.95262 -16.60292 -16.28875 -16.20873 -15.98840 -15.85180 -15.53574 -15.21100 -15.13621 -14.81327 -14.77903 -14.33081 -14.19643 -14.05505 -13.94156 -13.83881 -13.61531 -13.57417 -13.13135 -12.94262 -12.74972 -12.67478 -12.57984 -12.51584 -12.42615 -12.28473 -12.13862 -11.99748 -11.98620 -11.88237 -11.12940 -10.97033 -10.77439 -10.64006 -10.60795 -10.41181 -10.31403 -9.57923 -5.21651 -1.25257 -0.55245 0.28401 0.38557 0.61672 0.99641 1.04351 1.23881 1.29083 1.38573 1.63979 1.66219 1.81752 2.02031 2.12977 2.77838 2.78992 2.91530 3.01380 3.15266 3.19553 3.25174 3.31545 3.32992 3.38717 3.57850 3.59697 3.62329 3.65666 3.74908 3.81394 3.85248 3.86656 3.89313 3.96642 4.03160 4.11223 4.19338 4.19685 4.28728 4.31597 4.37342 4.45066 4.49735 4.54886 4.61229 4.61814 4.83136 5.05751 5.29631 5.37433 5.43108 5.45226 5.77537 5.85752 6.10394 6.51409 6.75688 6.88059 7.11349 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.283 6.283 3 C 0.171 3.829 4 C 0.110 3.890 5 O -0.265 6.265 6 C 0.031 3.969 7 C 0.518 3.482 8 O -0.507 6.507 9 N -0.726 5.726 10 C 0.133 3.867 11 C -0.119 4.119 12 H 0.111 0.889 13 C -0.135 4.135 14 C 0.133 3.867 15 H 0.128 0.872 16 N -0.371 5.371 17 C 0.253 3.747 18 N -0.544 5.544 19 C 0.199 3.801 20 N -0.319 5.319 21 C -0.141 4.141 22 C -0.117 4.117 23 C -0.025 4.025 24 N 0.036 4.964 25 O -0.175 6.175 26 O -0.131 6.131 27 C 0.007 3.993 28 C -0.082 4.082 29 O -0.534 6.534 30 Si 0.688 3.312 31 C -0.186 4.186 32 H 0.117 0.883 33 H 0.061 0.939 34 H 0.064 0.936 35 H 0.101 0.899 36 H 0.101 0.899 37 H 0.405 0.595 38 H 0.075 0.925 39 H 0.078 0.922 40 H 0.095 0.905 41 H 0.089 0.911 42 H 0.216 0.784 43 H 0.218 0.782 44 H 0.091 0.909 45 H 0.097 0.903 46 H 0.168 0.832 47 H 0.102 0.898 48 H 0.390 0.610 49 H -0.247 1.247 50 H -0.250 1.250 51 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.518 3.816 2.423 5.728 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.194 6.194 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.048 4.048 7 C 0.302 3.698 8 O -0.380 6.380 9 N -0.381 5.381 10 C 0.010 3.990 11 C -0.138 4.138 12 H 0.129 0.871 13 C -0.174 4.174 14 C 0.030 3.970 15 H 0.146 0.854 16 N -0.161 5.161 17 C -0.044 4.044 18 N -0.271 5.271 19 C -0.104 4.104 20 N -0.146 5.146 21 C -0.180 4.180 22 C -0.136 4.136 23 C -0.109 4.109 24 N 0.556 4.444 25 O -0.385 6.385 26 O -0.352 6.352 27 C 0.005 3.995 28 C -0.193 4.193 29 O -0.341 6.341 30 Si 0.588 3.412 31 C -0.205 4.205 32 H 0.135 0.865 33 H 0.079 0.921 34 H 0.082 0.918 35 H 0.118 0.882 36 H 0.119 0.881 37 H 0.239 0.761 38 H 0.094 0.906 39 H 0.096 0.904 40 H 0.114 0.886 41 H 0.108 0.892 42 H 0.232 0.768 43 H 0.235 0.765 44 H 0.110 0.890 45 H 0.116 0.884 46 H 0.186 0.814 47 H 0.119 0.881 48 H 0.239 0.761 49 H -0.172 1.172 50 H -0.174 1.174 51 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -4.015 0.693 2.831 4.962 hybrid contribution 0.853 1.080 -0.013 1.376 sum -3.163 1.773 2.818 4.592 Atomic orbital electron populations 1.23388 0.76939 1.05764 1.01871 1.86335 1.22333 1.24215 1.86561 1.18409 0.89124 0.85744 0.94485 1.17799 0.88249 0.85386 1.02346 1.86334 1.16842 1.25979 1.88480 1.22665 0.80260 0.97170 1.04687 1.19836 0.82537 0.90197 0.77234 1.90824 1.62610 1.37848 1.46719 1.45757 1.05800 1.09974 1.76572 1.21368 0.90144 0.84040 1.03431 1.22625 0.94041 0.99453 0.97690 0.87114 1.23454 0.96299 0.97336 1.00283 1.23001 0.96585 0.88389 0.89025 0.85391 1.50565 1.16664 1.30696 1.18212 1.25972 0.99429 0.93883 0.85103 1.70605 1.06778 1.17387 1.32346 1.26098 0.96638 0.98804 0.88831 1.78082 1.03198 1.09912 1.23408 1.23601 0.95608 1.01017 0.97728 1.20785 1.02186 0.88860 1.01803 1.20369 0.91817 0.83298 1.15378 1.43254 1.00933 1.02454 0.97808 1.94542 0.95702 1.93687 1.54542 1.94498 1.64676 1.24144 1.51898 1.18951 0.90714 0.95066 0.94777 1.24873 1.09140 0.94027 0.91250 1.86436 1.76797 1.44139 1.26745 0.94586 0.79012 0.87608 0.80003 1.20944 1.00760 0.90027 1.08777 0.86501 0.92052 0.91781 0.88157 0.88136 0.76078 0.90635 0.90412 0.88638 0.89240 0.76809 0.76547 0.88991 0.88436 0.81427 0.88077 0.76123 1.17236 1.17386 0.82563 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.28 -0.55 10.28 -34.23 -0.35 -0.90 16 3 C 0.17 0.29 6.70 -39.12 -0.26 0.03 16 4 C 0.11 0.15 6.70 -39.12 -0.26 -0.11 16 5 O -0.26 -0.50 9.45 -47.36 -0.45 -0.95 16 6 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 7 C 0.52 -0.17 7.91 -10.98 -0.09 -0.25 16 8 O -0.51 -2.51 16.50 -14.35 -0.24 -2.75 16 9 N -0.73 2.92 5.56 -60.29 -0.33 2.59 16 10 C 0.13 -0.50 5.51 -4.04 -0.02 -0.53 16 11 C -0.12 0.70 3.75 -89.81 -0.34 0.36 16 12 H 0.11 -0.79 8.14 -51.93 -0.42 -1.22 16 13 C -0.13 0.55 7.44 -25.92 -0.19 0.36 16 14 C 0.13 -0.43 5.07 -67.12 -0.34 -0.78 16 15 H 0.13 -0.46 8.14 -51.93 -0.42 -0.88 16 16 N -0.37 -0.09 3.83 -55.32 -0.21 -0.31 16 17 C 0.25 0.05 11.87 -90.65 -1.08 -1.03 16 18 N -0.54 -1.67 11.19 -15.83 -0.18 -1.85 16 19 C 0.20 0.47 13.03 -91.80 -1.20 -0.72 16 20 N -0.32 -0.96 12.70 29.29 0.37 -0.59 16 21 C -0.14 0.81 7.00 -25.92 -0.18 0.63 16 22 C -0.12 -0.05 8.54 -39.46 -0.34 -0.39 16 23 C -0.02 -0.06 6.85 -79.94 -0.55 -0.60 16 24 N 0.04 0.14 4.45 33.96 0.15 0.29 16 25 O -0.17 -0.76 18.44 -29.46 -0.54 -1.31 16 26 O -0.13 -0.54 14.62 -35.96 -0.53 -1.06 16 27 C 0.01 0.01 5.29 -104.62 -0.55 -0.54 16 28 C -0.08 0.03 1.73 36.00 0.06 0.09 16 29 O -0.53 -0.01 11.77 -55.46 -0.65 -0.66 16 30 Si 0.69 -1.73 30.19 -169.99 -5.13 -6.86 16 31 C -0.19 -0.16 7.65 -39.46 -0.30 -0.46 16 32 H 0.12 -0.40 8.14 -51.93 -0.42 -0.83 16 33 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 34 H 0.06 -0.17 7.67 -51.93 -0.40 -0.57 16 35 H 0.10 -0.49 7.66 -51.93 -0.40 -0.89 16 36 H 0.10 -0.48 7.66 -51.92 -0.40 -0.88 16 37 H 0.40 -2.92 8.47 -40.82 -0.35 -3.27 16 38 H 0.08 -0.21 7.84 -51.93 -0.41 -0.62 16 39 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 40 H 0.10 -0.29 8.10 -51.92 -0.42 -0.71 16 41 H 0.09 -0.35 8.14 -51.93 -0.42 -0.78 16 42 H 0.22 -0.81 6.75 -52.49 -0.35 -1.16 16 43 H 0.22 -0.17 8.06 -52.49 -0.42 -0.60 16 44 H 0.09 -0.60 8.14 -51.93 -0.42 -1.03 16 45 H 0.10 -0.58 6.14 -51.93 -0.32 -0.90 16 46 H 0.17 -0.36 5.85 -52.49 -0.31 -0.67 16 47 H 0.10 -0.06 6.07 -51.93 -0.32 -0.38 16 48 H 0.39 -1.89 8.74 45.56 0.40 -1.49 16 49 H -0.25 0.18 6.74 56.52 0.38 0.56 16 50 H -0.25 0.11 7.11 56.52 0.40 0.51 16 51 H 0.16 -0.10 3.13 -52.49 -0.16 -0.26 16 LS Contribution 431.56 15.07 6.50 6.50 Total: 0.00 -15.89 431.56 -12.05 -27.94 By element: Atomic # 1 Polarization: -11.23 SS G_CDS: -6.00 Total: -17.24 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: -4.45 Total: -2.86 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.20 Total: 0.14 kcal Atomic # 8 Polarization: -4.87 SS G_CDS: -2.76 Total: -7.63 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: -5.13 Total: -6.86 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -15.89 -12.05 -27.94 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_4549636.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.092 kcal (2) G-P(sol) polarization free energy of solvation -15.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.046 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.941 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.151 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds