Wall clock time and date at job start Sun Mar 7 2021 07:30:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86293 * 109.47260 * 2 1 4 4 C 1.50696 * 109.47236 * 239.99379 * 2 1 3 5 5 C 1.38248 * 119.94139 * 120.00263 * 4 2 1 6 6 C 1.38171 * 120.05494 * 179.97438 * 5 4 2 7 7 C 1.38702 * 119.94291 * 0.02709 * 6 5 4 8 8 O 1.35903 * 120.05689 * 179.97438 * 7 6 5 9 9 C 1.42906 * 116.99522 * 359.97438 * 8 7 6 10 10 C 1.50706 * 109.46702 * 179.97438 * 9 8 7 11 11 O 1.21279 * 120.00072 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99762 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 C 1.52993 * 109.47551 * 180.02562 * 13 12 10 15 15 H 1.09005 * 112.84727 * 45.33723 * 14 13 12 16 16 C 1.53776 * 113.61612 * 176.52904 * 14 13 12 17 17 C 1.53790 * 87.08309 * 139.98322 * 16 14 13 18 18 H 1.09005 * 113.61113 * 89.20011 * 17 16 14 19 19 N 1.46493 * 113.61543 * 220.01872 * 17 16 14 20 20 C 1.34438 * 126.81863 * 85.00142 * 19 17 16 21 21 N 1.30836 * 108.07280 * 179.97438 * 20 19 17 22 22 C 1.33241 * 109.83183 * 0.02562 * 21 20 19 23 23 N 1.30717 * 108.94487 * 359.74726 * 22 21 20 24 24 C 1.53781 * 113.61636 * 274.14060 * 14 13 12 25 25 C 1.38759 * 119.89295 * 0.24971 * 7 6 5 26 26 N 1.48000 * 120.03028 * 179.73198 * 25 7 6 27 27 O 1.21801 * 120.00043 * 179.97438 * 26 25 7 28 28 O 1.21795 * 120.00170 * 359.97438 * 26 25 7 29 29 C 1.38125 * 119.93719 * 359.47076 * 25 7 6 30 30 H 0.96703 * 113.99768 * 60.00211 * 1 2 3 31 31 H 1.09006 * 109.46764 * 120.00110 * 2 1 3 32 32 H 1.48496 * 110.00372 * 59.99706 * 3 2 1 33 33 H 1.48499 * 110.00124 * 181.31910 * 3 2 1 34 34 H 1.07994 * 119.97190 * 0.02562 * 5 4 2 35 35 H 1.07998 * 120.02300 * 180.02562 * 6 5 4 36 36 H 1.09000 * 109.46890 * 59.99975 * 9 8 7 37 37 H 1.09000 * 109.47141 * 299.99618 * 9 8 7 38 38 H 0.96999 * 120.00047 * 0.02562 * 12 10 9 39 39 H 1.09000 * 109.47024 * 300.00478 * 13 12 10 40 40 H 1.09004 * 109.46875 * 60.00324 * 13 12 10 41 41 H 1.08999 * 113.62106 * 254.52893 * 16 14 13 42 42 H 1.09000 * 113.61704 * 25.35405 * 16 14 13 43 43 H 1.07990 * 125.96117 * 359.97438 * 20 19 17 44 44 H 1.08000 * 125.52987 * 180.02562 * 22 21 20 45 45 H 1.08997 * 113.61207 * 334.56725 * 24 14 13 46 46 H 1.08998 * 113.61494 * 105.46713 * 24 14 13 47 47 H 1.08006 * 119.96875 * 180.27279 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7261 -0.0376 -2.1396 6 6 3.1885 -0.6869 -3.2682 7 6 2.8541 -2.0148 -3.4888 8 8 3.3071 -2.6556 -4.5983 9 6 4.1232 -1.9002 -5.4959 10 6 4.5287 -2.7694 -6.6583 11 8 4.1560 -3.9222 -6.7125 12 7 5.3056 -2.2656 -7.6376 13 6 5.7004 -3.1105 -8.7674 14 6 6.5740 -2.3019 -9.7284 15 1 7.3399 -1.7196 -9.2160 16 6 7.1134 -3.1241 -10.9106 17 6 6.8386 -1.8930 -11.7904 18 1 7.6771 -1.1985 -11.8438 19 7 6.2892 -2.2237 -13.1075 20 6 4.9966 -2.4338 -13.4116 21 7 4.9188 -2.7020 -14.6898 22 6 6.1353 -2.6731 -15.2326 23 7 7.0074 -2.3794 -14.3042 24 6 5.7696 -1.4909 -10.7580 25 6 2.0515 -2.6864 -2.5776 26 7 1.6879 -4.1016 -2.8129 27 8 0.9837 -4.6907 -2.0125 28 8 2.0928 -4.6772 -3.8070 29 6 1.5966 -2.0344 -1.4480 30 1 -0.3933 0.4417 -0.7651 31 1 1.7923 -0.5139 0.8900 32 1 1.5615 2.4679 1.2084 33 1 3.5346 1.7702 -0.0321 34 1 2.9865 0.9962 -1.9672 35 1 3.8097 -0.1609 -3.9779 36 1 5.0147 -1.5545 -4.9727 37 1 3.5611 -1.0414 -5.8626 38 1 5.6040 -1.3436 -7.5941 39 1 6.2631 -3.9687 -8.4000 40 1 4.8091 -3.4574 -9.2904 41 1 8.1714 -3.3713 -10.8240 42 1 6.4961 -3.9871 -11.1600 43 1 4.1673 -2.3889 -12.7214 44 1 6.3633 -2.8575 -16.2721 45 1 4.7834 -1.9057 -10.9664 46 1 5.7443 -0.4216 -10.5481 47 1 0.9755 -2.5580 -0.7362 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567722_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:30:24 Heat of formation + Delta-G solvation = 61.870749 kcal Electronic energy + Delta-G solvation = -34732.903998 eV Core-core repulsion = 29697.202084 eV Total energy + Delta-G solvation = -5035.701915 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.146 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -43.15521 -43.06268 -41.82777 -41.08383 -40.30026 -39.43473 -37.58517 -37.16436 -35.96241 -33.66166 -33.49314 -32.44726 -32.15888 -30.85305 -28.57735 -27.63421 -27.33947 -26.73686 -25.25040 -24.07146 -23.00569 -22.86467 -22.49858 -21.94409 -20.76868 -20.50401 -19.48670 -19.34496 -18.91601 -18.39240 -18.33571 -18.08271 -17.78202 -17.46170 -17.25945 -16.97498 -16.55823 -16.40705 -16.24239 -16.18360 -15.89296 -15.77288 -15.21558 -15.17286 -14.96242 -14.83154 -14.18713 -14.13967 -13.99576 -13.94843 -13.81353 -13.57459 -13.35524 -12.95267 -12.68621 -12.56954 -12.45082 -12.23510 -12.16209 -12.14179 -12.00911 -11.88840 -11.77083 -11.09913 -10.98233 -10.97737 -10.80563 -10.78158 -10.64830 -10.39963 -9.95693 -5.34321 -1.17699 -0.43044 0.33883 0.49057 0.60810 0.95472 1.00359 1.22549 1.30917 1.32282 1.72066 1.88794 2.01383 2.07569 2.75514 2.89846 2.93868 2.97705 3.14905 3.16320 3.21553 3.24378 3.32288 3.35665 3.47182 3.50560 3.53767 3.64456 3.66554 3.83705 3.95722 4.01915 4.09392 4.11222 4.18406 4.26033 4.26367 4.36975 4.37947 4.43894 4.50970 4.61337 4.62945 4.82673 4.87695 5.06058 5.28842 5.37866 5.44400 5.65622 5.76772 6.09761 6.29271 6.89811 6.90704 7.10667 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.066 4.066 3 Si 0.693 3.307 4 C -0.157 4.157 5 C -0.025 4.025 6 C -0.209 4.209 7 C 0.199 3.801 8 O -0.254 6.254 9 C 0.031 3.969 10 C 0.513 3.487 11 O -0.494 6.494 12 N -0.728 5.728 13 C 0.133 3.867 14 C -0.118 4.118 15 H 0.110 0.890 16 C -0.135 4.135 17 C 0.133 3.867 18 H 0.128 0.872 19 N -0.371 5.371 20 C 0.253 3.747 21 N -0.544 5.544 22 C 0.199 3.801 23 N -0.320 5.320 24 C -0.141 4.141 25 C -0.075 4.075 26 N 0.028 4.972 27 O -0.176 6.176 28 O -0.118 6.118 29 C 0.009 3.991 30 H 0.381 0.619 31 H 0.121 0.879 32 H -0.248 1.248 33 H -0.254 1.254 34 H 0.149 0.851 35 H 0.157 0.843 36 H 0.102 0.898 37 H 0.103 0.897 38 H 0.402 0.598 39 H 0.078 0.922 40 H 0.076 0.924 41 H 0.089 0.911 42 H 0.096 0.904 43 H 0.216 0.784 44 H 0.218 0.782 45 H 0.098 0.902 46 H 0.091 0.909 47 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.703 11.642 0.404 12.224 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.177 4.177 3 Si 0.594 3.406 4 C -0.159 4.159 5 C -0.043 4.043 6 C -0.228 4.228 7 C 0.150 3.850 8 O -0.163 6.163 9 C -0.048 4.048 10 C 0.296 3.704 11 O -0.366 6.366 12 N -0.383 5.383 13 C 0.010 3.990 14 C -0.138 4.138 15 H 0.128 0.872 16 C -0.174 4.174 17 C 0.030 3.970 18 H 0.145 0.855 19 N -0.162 5.162 20 C -0.044 4.044 21 N -0.271 5.271 22 C -0.103 4.103 23 N -0.146 5.146 24 C -0.179 4.179 25 C -0.159 4.159 26 N 0.548 4.452 27 O -0.385 6.385 28 O -0.342 6.342 29 C -0.010 4.010 30 H 0.229 0.771 31 H 0.138 0.862 32 H -0.173 1.173 33 H -0.179 1.179 34 H 0.166 0.834 35 H 0.174 0.826 36 H 0.119 0.881 37 H 0.121 0.879 38 H 0.237 0.763 39 H 0.096 0.904 40 H 0.094 0.906 41 H 0.107 0.893 42 H 0.114 0.886 43 H 0.232 0.768 44 H 0.235 0.765 45 H 0.116 0.884 46 H 0.109 0.891 47 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 4.609 11.528 1.177 12.471 hybrid contribution 0.235 -0.252 0.260 0.432 sum 4.844 11.277 1.438 12.357 Atomic orbital electron populations 1.86566 1.16560 1.81609 1.49331 1.25102 0.85715 1.10262 0.96576 0.94910 0.80653 0.76961 0.88124 1.20322 1.02192 0.93967 0.99384 1.21272 0.91872 0.99830 0.91316 1.21262 1.07142 0.92641 1.01793 1.18684 0.89928 0.90801 0.85620 1.86507 1.62866 1.37491 1.29442 1.22723 0.96384 0.94900 0.90751 1.19818 0.79365 0.88176 0.83039 1.90886 1.52145 1.17064 1.76456 1.45736 1.53240 1.16100 1.23219 1.21362 0.98627 0.93231 0.85767 1.22617 0.98623 0.98109 0.94419 0.87230 1.23446 1.03644 0.97161 0.93135 1.23031 0.98819 0.99064 0.76101 0.85459 1.50562 1.05907 1.51588 1.08109 1.25976 0.88278 0.96136 0.93970 1.70603 1.25641 1.24421 1.06425 1.26098 0.85873 0.97759 1.00615 1.78084 1.20603 1.24883 0.91065 1.23625 0.98314 1.02281 0.93692 1.20594 1.10412 0.84164 1.00780 1.43337 0.99215 1.02261 1.00354 1.94562 1.35011 1.66689 1.42251 1.94695 1.54849 1.67470 1.17166 1.20846 0.93498 0.93560 0.93048 0.77122 0.86151 1.17261 1.17931 0.83392 0.82599 0.88063 0.87937 0.76327 0.90382 0.90572 0.89259 0.88571 0.76787 0.76548 0.88408 0.89087 0.81788 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.10 12.77 -35.23 -0.45 0.65 16 2 C -0.07 0.20 2.82 36.00 0.10 0.30 16 3 Si 0.69 -2.97 29.78 -169.99 -5.06 -8.03 16 4 C -0.16 0.42 5.39 -104.60 -0.56 -0.14 16 5 C -0.03 0.12 8.66 -39.60 -0.34 -0.23 16 6 C -0.21 0.89 9.04 -39.43 -0.36 0.53 16 7 C 0.20 -0.04 6.67 -39.22 -0.26 -0.30 16 8 O -0.25 -0.29 7.68 -49.79 -0.38 -0.67 16 9 C 0.03 -0.12 5.22 36.01 0.19 0.07 16 10 C 0.51 -0.60 7.91 -10.98 -0.09 -0.69 16 11 O -0.49 -2.37 16.50 -14.35 -0.24 -2.61 16 12 N -0.73 3.65 5.56 -60.30 -0.33 3.32 16 13 C 0.13 -0.58 5.50 -4.05 -0.02 -0.60 16 14 C -0.12 0.78 3.75 -89.81 -0.34 0.44 16 15 H 0.11 -0.87 8.14 -51.93 -0.42 -1.29 16 16 C -0.13 0.61 7.44 -25.92 -0.19 0.42 16 17 C 0.13 -0.51 5.07 -67.02 -0.34 -0.85 16 18 H 0.13 -0.53 8.14 -51.93 -0.42 -0.95 16 19 N -0.37 0.07 3.83 -55.23 -0.21 -0.14 16 20 C 0.25 -0.05 11.87 -90.64 -1.08 -1.13 16 21 N -0.54 -1.49 11.19 -15.83 -0.18 -1.67 16 22 C 0.20 0.41 13.03 -91.81 -1.20 -0.78 16 23 N -0.32 -0.85 12.70 29.29 0.37 -0.48 16 24 C -0.14 0.91 7.01 -25.82 -0.18 0.73 16 25 C -0.08 -0.16 6.87 -79.81 -0.55 -0.71 16 26 N 0.03 0.17 4.45 34.03 0.15 0.32 16 27 O -0.18 -1.21 18.45 -29.46 -0.54 -1.75 16 28 O -0.12 -0.94 17.24 -36.49 -0.63 -1.57 16 29 C 0.01 0.00 9.12 -39.61 -0.36 -0.36 16 30 H 0.38 -2.31 8.70 45.56 0.40 -1.92 16 31 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 32 H -0.25 0.11 7.11 56.52 0.40 0.51 16 33 H -0.25 0.63 7.11 56.52 0.40 1.03 16 34 H 0.15 -1.08 4.87 -52.49 -0.26 -1.34 16 35 H 0.16 -1.25 6.30 -52.49 -0.33 -1.58 16 36 H 0.10 -0.72 7.66 -51.93 -0.40 -1.12 16 37 H 0.10 -0.76 7.66 -51.93 -0.40 -1.16 16 38 H 0.40 -3.46 8.47 -40.82 -0.35 -3.80 16 39 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.08 -0.25 7.88 -51.93 -0.41 -0.66 16 41 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 42 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 43 H 0.22 -0.91 6.75 -52.49 -0.35 -1.26 16 44 H 0.22 -0.23 8.06 -52.49 -0.42 -0.66 16 45 H 0.10 -0.64 6.17 -51.93 -0.32 -0.96 16 46 H 0.09 -0.69 8.14 -51.93 -0.42 -1.11 16 47 H 0.16 0.02 7.61 -52.48 -0.40 -0.38 16 LS Contribution 406.63 15.07 6.13 6.13 Total: 0.00 -17.01 406.63 -12.34 -29.35 By element: Atomic # 1 Polarization: -14.16 SS G_CDS: -5.38 Total: -19.55 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -5.58 Total: -3.29 kcal Atomic # 7 Polarization: 1.55 SS G_CDS: -0.20 Total: 1.35 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -2.24 Total: -5.96 kcal Atomic # 14 Polarization: -2.97 SS G_CDS: -5.06 Total: -8.03 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -17.01 -12.34 -29.35 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.218 kcal (2) G-P(sol) polarization free energy of solvation -17.012 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.348 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.871 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds