Wall clock time and date at job start Sun Mar 7 2021 07:30:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86293 * 109.47260 * 2 1 4 4 C 1.50696 * 109.47236 * 239.99379 * 2 1 3 5 5 C 1.38248 * 119.94139 * 120.00263 * 4 2 1 6 6 C 1.38171 * 120.05494 * 179.97438 * 5 4 2 7 7 C 1.38702 * 119.94291 * 0.02709 * 6 5 4 8 8 O 1.35903 * 120.05689 * 179.97438 * 7 6 5 9 9 C 1.42906 * 116.99522 * 359.97438 * 8 7 6 10 10 C 1.50706 * 109.46702 * 179.97438 * 9 8 7 11 11 O 1.21279 * 120.00072 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99762 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00258 * 179.97438 * 12 10 9 14 14 C 1.52993 * 109.47551 * 180.02562 * 13 12 10 15 15 H 1.09005 * 112.84727 * 45.33723 * 14 13 12 16 16 C 1.53776 * 113.61612 * 176.52904 * 14 13 12 17 17 C 1.53790 * 87.08309 * 139.98322 * 16 14 13 18 18 H 1.09005 * 113.61113 * 89.20011 * 17 16 14 19 19 N 1.46493 * 113.61543 * 220.01872 * 17 16 14 20 20 C 1.34438 * 126.81863 * 85.00142 * 19 17 16 21 21 N 1.30836 * 108.07280 * 179.97438 * 20 19 17 22 22 C 1.33241 * 109.83183 * 0.02562 * 21 20 19 23 23 N 1.30717 * 108.94487 * 359.74726 * 22 21 20 24 24 C 1.53781 * 113.61636 * 274.14060 * 14 13 12 25 25 C 1.38759 * 119.89295 * 0.24971 * 7 6 5 26 26 N 1.48000 * 120.03028 * 179.73198 * 25 7 6 27 27 O 1.21801 * 120.00043 * 179.97438 * 26 25 7 28 28 O 1.21795 * 120.00170 * 359.97438 * 26 25 7 29 29 C 1.38125 * 119.93719 * 359.47076 * 25 7 6 30 30 H 0.96703 * 113.99768 * 60.00211 * 1 2 3 31 31 H 1.09006 * 109.46764 * 120.00110 * 2 1 3 32 32 H 1.48496 * 110.00372 * 59.99706 * 3 2 1 33 33 H 1.48499 * 110.00124 * 181.31910 * 3 2 1 34 34 H 1.07994 * 119.97190 * 0.02562 * 5 4 2 35 35 H 1.07998 * 120.02300 * 180.02562 * 6 5 4 36 36 H 1.09000 * 109.46890 * 59.99975 * 9 8 7 37 37 H 1.09000 * 109.47141 * 299.99618 * 9 8 7 38 38 H 0.96999 * 120.00047 * 0.02562 * 12 10 9 39 39 H 1.09000 * 109.47024 * 300.00478 * 13 12 10 40 40 H 1.09004 * 109.46875 * 60.00324 * 13 12 10 41 41 H 1.08999 * 113.62106 * 254.52893 * 16 14 13 42 42 H 1.09000 * 113.61704 * 25.35405 * 16 14 13 43 43 H 1.07990 * 125.96117 * 359.97438 * 20 19 17 44 44 H 1.08000 * 125.52987 * 180.02562 * 22 21 20 45 45 H 1.08997 * 113.61207 * 334.56725 * 24 14 13 46 46 H 1.08998 * 113.61494 * 105.46713 * 24 14 13 47 47 H 1.08006 * 119.96875 * 180.27279 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7261 -0.0376 -2.1396 6 6 3.1885 -0.6869 -3.2682 7 6 2.8541 -2.0148 -3.4888 8 8 3.3071 -2.6556 -4.5983 9 6 4.1232 -1.9002 -5.4959 10 6 4.5287 -2.7694 -6.6583 11 8 4.1560 -3.9222 -6.7125 12 7 5.3056 -2.2656 -7.6376 13 6 5.7004 -3.1105 -8.7674 14 6 6.5740 -2.3019 -9.7284 15 1 7.3399 -1.7196 -9.2160 16 6 7.1134 -3.1241 -10.9106 17 6 6.8386 -1.8930 -11.7904 18 1 7.6771 -1.1985 -11.8438 19 7 6.2892 -2.2237 -13.1075 20 6 4.9966 -2.4338 -13.4116 21 7 4.9188 -2.7020 -14.6898 22 6 6.1353 -2.6731 -15.2326 23 7 7.0074 -2.3794 -14.3042 24 6 5.7696 -1.4909 -10.7580 25 6 2.0515 -2.6864 -2.5776 26 7 1.6879 -4.1016 -2.8129 27 8 0.9837 -4.6907 -2.0125 28 8 2.0928 -4.6772 -3.8070 29 6 1.5966 -2.0344 -1.4480 30 1 -0.3933 0.4417 -0.7651 31 1 1.7923 -0.5139 0.8900 32 1 1.5615 2.4679 1.2084 33 1 3.5346 1.7702 -0.0321 34 1 2.9865 0.9962 -1.9672 35 1 3.8097 -0.1609 -3.9779 36 1 5.0147 -1.5545 -4.9727 37 1 3.5611 -1.0414 -5.8626 38 1 5.6040 -1.3436 -7.5941 39 1 6.2631 -3.9687 -8.4000 40 1 4.8091 -3.4574 -9.2904 41 1 8.1714 -3.3713 -10.8240 42 1 6.4961 -3.9871 -11.1600 43 1 4.1673 -2.3889 -12.7214 44 1 6.3633 -2.8575 -16.2721 45 1 4.7834 -1.9057 -10.9664 46 1 5.7443 -0.4216 -10.5481 47 1 0.9755 -2.5580 -0.7362 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567722_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:30:22 Heat of formation + Delta-G solvation = 55.611500 kcal Electronic energy + Delta-G solvation = -34733.175420 eV Core-core repulsion = 29697.202084 eV Total energy + Delta-G solvation = -5035.973336 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.146 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -43.28367 -43.11993 -41.75586 -40.88061 -40.04875 -39.28062 -37.58726 -37.36299 -35.80284 -33.56436 -33.40624 -32.25293 -32.17085 -30.61596 -28.28919 -27.81444 -26.91821 -26.51357 -25.07298 -23.98001 -22.96306 -22.82368 -22.32866 -21.74993 -20.54848 -20.37586 -19.76217 -19.20255 -18.74400 -18.62852 -18.18512 -17.90696 -17.58556 -17.21659 -17.03138 -16.79087 -16.33384 -16.25228 -16.06214 -16.01022 -15.72392 -15.53602 -15.14198 -14.97999 -14.70494 -14.61267 -14.01162 -13.89549 -13.75399 -13.61815 -13.54359 -13.33784 -13.21295 -12.86507 -12.69978 -12.35162 -12.27340 -12.24450 -12.20352 -12.18397 -11.93649 -11.77596 -11.63937 -11.04824 -10.98818 -10.84927 -10.82227 -10.55623 -10.54918 -10.16630 -9.77053 -4.98877 -1.30558 -0.22663 0.16721 0.36708 0.62941 1.22907 1.28332 1.39277 1.50305 1.64824 1.96222 2.03652 2.06882 2.35280 3.10723 3.13936 3.26849 3.32597 3.41291 3.44737 3.51811 3.55218 3.66210 3.72594 3.73802 3.81492 3.87476 3.97683 4.05783 4.13990 4.19983 4.30524 4.31797 4.36738 4.52418 4.60038 4.64080 4.64852 4.72097 4.80558 4.85660 4.90955 4.96212 5.08828 5.15951 5.20547 5.33696 5.41923 5.45758 5.78434 5.89846 6.42214 6.49514 6.74166 7.09085 7.20567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.084 4.084 3 Si 0.801 3.199 4 C -0.150 4.150 5 C -0.005 4.005 6 C -0.187 4.187 7 C 0.195 3.805 8 O -0.293 6.293 9 C 0.023 3.977 10 C 0.506 3.494 11 O -0.570 6.570 12 N -0.703 5.703 13 C 0.132 3.868 14 C -0.095 4.095 15 H 0.136 0.864 16 C -0.140 4.140 17 C 0.119 3.881 18 H 0.133 0.867 19 N -0.369 5.369 20 C 0.255 3.745 21 N -0.582 5.582 22 C 0.188 3.812 23 N -0.353 5.353 24 C -0.127 4.127 25 C -0.105 4.105 26 N 0.034 4.966 27 O -0.208 6.208 28 O -0.171 6.171 29 C -0.005 4.005 30 H 0.398 0.602 31 H 0.108 0.892 32 H -0.307 1.307 33 H -0.263 1.263 34 H 0.190 0.810 35 H 0.210 0.790 36 H 0.144 0.856 37 H 0.149 0.851 38 H 0.425 0.575 39 H 0.057 0.943 40 H 0.062 0.938 41 H 0.086 0.914 42 H 0.079 0.921 43 H 0.250 0.750 44 H 0.234 0.766 45 H 0.100 0.900 46 H 0.115 0.885 47 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.203 16.520 0.697 17.334 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.192 4.192 3 Si 0.705 3.295 4 C -0.152 4.152 5 C -0.022 4.022 6 C -0.205 4.205 7 C 0.145 3.855 8 O -0.203 6.203 9 C -0.054 4.054 10 C 0.291 3.709 11 O -0.447 6.447 12 N -0.359 5.359 13 C 0.009 3.991 14 C -0.114 4.114 15 H 0.154 0.846 16 C -0.179 4.179 17 C 0.018 3.982 18 H 0.151 0.849 19 N -0.159 5.159 20 C -0.041 4.041 21 N -0.310 5.310 22 C -0.115 4.115 23 N -0.181 5.181 24 C -0.165 4.165 25 C -0.191 4.191 26 N 0.544 4.456 27 O -0.414 6.414 28 O -0.386 6.386 29 C -0.024 4.024 30 H 0.248 0.752 31 H 0.126 0.874 32 H -0.236 1.236 33 H -0.189 1.189 34 H 0.206 0.794 35 H 0.226 0.774 36 H 0.161 0.839 37 H 0.166 0.834 38 H 0.264 0.736 39 H 0.075 0.925 40 H 0.080 0.920 41 H 0.104 0.896 42 H 0.098 0.902 43 H 0.266 0.734 44 H 0.250 0.750 45 H 0.118 0.882 46 H 0.134 0.866 47 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 6.143 16.394 1.408 17.564 hybrid contribution -0.209 -1.643 0.281 1.680 sum 5.934 14.751 1.690 15.989 Atomic orbital electron populations 1.86532 1.17292 1.82228 1.50635 1.25496 0.85467 1.12153 0.96053 0.93805 0.77920 0.72392 0.85417 1.20450 1.02180 0.92622 0.99945 1.21737 0.89400 1.01213 0.89878 1.21831 1.06000 0.90362 1.02310 1.18957 0.89512 0.92073 0.84970 1.86476 1.63689 1.39850 1.30299 1.23169 0.98185 0.94607 0.89408 1.20519 0.78684 0.87593 0.84065 1.90868 1.55240 1.20397 1.78225 1.45544 1.51568 1.16938 1.21824 1.21283 0.98212 0.93393 0.86246 1.22498 0.98497 0.97215 0.93213 0.84632 1.23444 1.03320 0.96815 0.94335 1.23441 1.00338 0.99540 0.74909 0.84882 1.50780 1.05863 1.50856 1.08386 1.26602 0.89114 0.94663 0.93742 1.70578 1.26334 1.26049 1.08069 1.26507 0.85814 0.97650 1.01514 1.77986 1.21880 1.25975 0.92270 1.23634 0.97499 1.03691 0.91718 1.20876 1.13418 0.81567 1.03211 1.43916 0.98224 1.04019 0.99436 1.94509 1.36036 1.68429 1.42427 1.94671 1.56355 1.69287 1.18249 1.20828 0.94258 0.94833 0.92477 0.75185 0.87425 1.23584 1.18857 0.79386 0.77371 0.83893 0.83375 0.73607 0.92475 0.91975 0.89553 0.90221 0.73450 0.74956 0.88191 0.86630 0.83471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.37 12.77 -148.98 -1.90 0.47 16 2 C -0.08 0.59 2.82 71.23 0.20 0.79 16 3 Si 0.80 -9.08 29.78 68.60 2.04 -7.03 16 4 C -0.15 1.04 5.39 -19.85 -0.11 0.93 16 5 C 0.00 0.07 8.66 22.26 0.19 0.26 16 6 C -0.19 2.47 9.04 22.36 0.20 2.67 16 7 C 0.19 -0.30 6.67 22.51 0.15 -0.15 16 8 O -0.29 -0.58 7.68 -63.43 -0.49 -1.07 16 9 C 0.02 -0.25 5.22 71.24 0.37 0.12 16 10 C 0.51 -1.53 7.91 87.66 0.69 -0.84 16 11 O -0.57 -6.77 16.50 16.01 0.26 -6.51 16 12 N -0.70 8.49 5.56 -463.07 -2.57 5.92 16 13 C 0.13 -1.20 5.50 86.38 0.47 -0.72 16 14 C -0.10 1.43 3.75 -10.27 -0.04 1.39 16 15 H 0.14 -2.65 8.14 -2.38 -0.02 -2.67 16 16 C -0.14 1.28 7.44 31.12 0.23 1.51 16 17 C 0.12 -1.03 5.07 45.58 0.23 -0.79 16 18 H 0.13 -1.29 8.14 -2.38 -0.02 -1.31 16 19 N -0.37 0.11 3.83 -328.64 -1.26 -1.15 16 20 C 0.25 -0.11 11.87 180.36 2.14 2.03 16 21 N -0.58 -3.66 11.19 -204.00 -2.28 -5.94 16 22 C 0.19 1.01 13.03 180.76 2.36 3.36 16 23 N -0.35 -2.20 12.70 -61.24 -0.78 -2.98 16 24 C -0.13 1.96 7.01 31.18 0.22 2.18 16 25 C -0.11 -0.60 6.87 36.48 0.25 -0.35 16 26 N 0.03 0.54 4.45 -46.24 -0.21 0.34 16 27 O -0.21 -3.79 18.45 18.89 0.35 -3.45 16 28 O -0.17 -3.51 17.24 25.61 0.44 -3.07 16 29 C 0.00 0.00 9.12 22.25 0.20 0.20 16 30 H 0.40 -5.19 8.70 -74.06 -0.64 -5.83 16 31 H 0.11 -0.52 7.96 -2.38 -0.02 -0.54 16 32 H -0.31 0.37 7.11 99.48 0.71 1.08 16 33 H -0.26 2.51 7.11 99.48 0.71 3.21 16 34 H 0.19 -4.02 4.87 -2.91 -0.01 -4.03 16 35 H 0.21 -4.99 6.30 -2.91 -0.02 -5.01 16 36 H 0.14 -2.79 7.66 -2.39 -0.02 -2.81 16 37 H 0.15 -3.02 7.66 -2.39 -0.02 -3.04 16 38 H 0.43 -9.11 8.47 -92.71 -0.79 -9.89 16 39 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 40 H 0.06 -0.35 7.88 -2.38 -0.02 -0.37 16 41 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 42 H 0.08 -0.43 8.10 -2.39 -0.02 -0.45 16 43 H 0.25 -2.35 6.75 -2.92 -0.02 -2.37 16 44 H 0.23 -0.17 8.06 -2.91 -0.02 -0.19 16 45 H 0.10 -1.53 6.17 -2.39 -0.01 -1.55 16 46 H 0.12 -2.24 8.14 -2.39 -0.02 -2.26 16 47 H 0.15 0.51 7.61 -2.91 -0.02 0.49 16 Total: 0.00 -51.51 406.63 1.06 -50.45 By element: Atomic # 1 Polarization: -38.24 SS G_CDS: -0.32 Total: -38.56 kcal Atomic # 6 Polarization: 4.81 SS G_CDS: 7.77 Total: 12.58 kcal Atomic # 7 Polarization: 3.29 SS G_CDS: -7.10 Total: -3.81 kcal Atomic # 8 Polarization: -12.29 SS G_CDS: -1.34 Total: -13.62 kcal Atomic # 14 Polarization: -9.08 SS G_CDS: 2.04 Total: -7.03 kcal Total: -51.51 1.06 -50.45 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.061 kcal (2) G-P(sol) polarization free energy of solvation -51.513 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.549 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.063 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -50.450 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.612 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds