Wall clock time and date at job start Sun Mar 7 2021 07:30:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35900 * 116.99805 * 2 1 4 4 C 1.38620 * 120.02698 * 180.23379 * 3 2 1 5 5 C 1.38656 * 119.88563 * 180.27555 * 4 3 2 6 6 O 1.35904 * 120.02228 * 179.76807 * 5 4 3 7 7 C 1.42896 * 117.00080 * 359.71833 * 6 5 4 8 8 C 1.50696 * 109.47216 * 180.02562 * 7 6 5 9 9 O 1.21284 * 120.00109 * 0.02562 * 8 7 6 10 10 N 1.34777 * 120.00137 * 180.02562 * 8 7 6 11 11 C 1.46506 * 119.99873 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.47035 * 179.97438 * 11 10 8 13 13 H 1.09005 * 112.84820 * 314.66247 * 12 11 10 14 14 C 1.53781 * 113.61642 * 85.86004 * 12 11 10 15 15 C 1.53946 * 87.01926 * 139.95209 * 14 12 11 16 16 H 1.08998 * 113.53906 * 89.18827 * 15 14 12 17 17 N 1.46501 * 113.74705 * 220.05547 * 15 14 12 18 18 C 1.34432 * 126.81529 * 12.30853 * 17 15 14 19 19 N 1.30841 * 108.07363 * 179.89256 * 18 17 15 20 20 C 1.33242 * 109.82585 * 0.38328 * 19 18 17 21 21 N 1.30716 * 108.94879 * 359.76040 * 20 19 18 22 22 C 1.53776 * 113.61482 * 183.47098 * 12 11 10 23 23 C 1.38747 * 119.94953 * 359.48738 * 5 4 3 24 24 C 1.50697 * 119.97459 * 180.27717 * 23 5 4 25 25 O 1.42903 * 109.47243 * 285.00143 * 24 23 5 26 26 Si 1.86298 * 109.47265 * 165.00237 * 24 23 5 27 27 C 1.38197 * 120.05258 * 0.25629 * 23 5 4 28 28 C 1.38153 * 120.11037 * 0.02562 * 27 23 5 29 29 H 1.08998 * 109.47118 * 300.00235 * 1 2 3 30 30 H 1.08997 * 109.47396 * 60.00145 * 1 2 3 31 31 H 1.08999 * 109.46887 * 180.02562 * 1 2 3 32 32 H 1.07996 * 120.05387 * 0.02562 * 4 3 2 33 33 H 1.09000 * 109.47075 * 60.00332 * 7 6 5 34 34 H 1.08996 * 109.47405 * 300.00508 * 7 6 5 35 35 H 0.96999 * 120.00047 * 359.97438 * 10 8 7 36 36 H 1.09004 * 109.47073 * 299.99562 * 11 10 8 37 37 H 1.09000 * 109.47212 * 59.99645 * 11 10 8 38 38 H 1.08998 * 113.61494 * 254.53145 * 14 12 11 39 39 H 1.08997 * 113.61207 * 25.43133 * 14 12 11 40 40 H 1.08003 * 125.96539 * 0.04149 * 18 17 15 41 41 H 1.07996 * 125.52148 * 179.73096 * 20 19 18 42 42 H 1.09004 * 113.61347 * 334.56629 * 22 12 11 43 43 H 1.08993 * 113.61643 * 105.46595 * 22 12 11 44 44 H 1.09005 * 109.47302 * 45.00058 * 24 23 5 45 45 H 0.96695 * 114.00122 * 300.00188 * 25 24 23 46 46 H 1.48497 * 110.00111 * 58.68082 * 26 24 23 47 47 H 1.48504 * 109.99962 * 180.02562 * 26 24 23 48 48 H 1.08002 * 119.94256 * 179.97438 * 27 23 5 49 49 H 1.07998 * 119.96944 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0049 5 6 4.0566 2.5211 0.0009 6 8 5.4135 2.5962 0.0009 7 6 6.1316 1.3607 0.0010 8 6 7.6124 1.6403 0.0016 9 8 8.0134 2.7849 0.0024 10 7 8.4912 0.6185 0.0012 11 6 9.9308 0.8904 0.0024 12 6 10.6996 -0.4325 0.0024 13 1 10.3013 -1.1535 0.7163 14 6 10.9223 -1.0156 -1.4031 15 6 12.3347 -1.4048 -0.9302 16 1 12.3836 -2.3927 -0.4723 17 7 13.3741 -1.1942 -1.9409 18 6 13.2525 -0.5082 -3.0907 19 7 14.4030 -0.5509 -3.7124 20 6 15.2769 -1.2588 -2.9978 21 7 14.6935 -1.6739 -1.9042 22 6 12.2250 -0.2583 0.0889 23 6 3.2970 3.6822 0.0008 24 6 3.9772 5.0269 0.0008 25 8 4.5034 5.2946 1.3022 26 14 2.7437 6.3469 -0.4538 27 6 1.9171 3.6065 0.0003 28 6 1.2905 2.3753 0.0004 29 1 -0.3633 0.5139 0.8899 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 4.0196 0.3793 -0.0091 33 1 5.8699 0.7883 -0.8890 34 1 5.8699 0.7884 0.8909 35 1 8.1705 -0.2970 0.0010 36 1 10.1930 1.4634 -0.8870 37 1 10.1919 1.4620 0.8930 38 1 10.2846 -1.8708 -1.6270 39 1 10.9177 -0.2646 -2.1931 40 1 12.3615 -0.0071 -3.4391 41 1 16.3009 -1.4577 -3.2771 42 1 12.5774 0.7001 -0.2925 43 1 12.6376 -0.5031 1.0675 44 1 4.7897 5.0231 -0.7259 45 1 3.8349 5.3131 2.0006 46 1 1.6150 6.3413 0.5111 47 1 3.4024 7.6779 -0.4580 48 1 1.3276 4.5115 0.0007 49 1 0.2120 2.3188 -0.0004 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567722_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:30:44 Heat of formation + Delta-G solvation = 19.005163 kcal Electronic energy + Delta-G solvation = -33007.917657 eV Core-core repulsion = 28327.153576 eV Total energy + Delta-G solvation = -4680.764081 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -43.13695 -41.82419 -41.00388 -40.19748 -39.65549 -38.35580 -37.00732 -35.83275 -33.52093 -32.30908 -32.20201 -31.53086 -30.24692 -28.42830 -28.03966 -26.94708 -26.12614 -25.10136 -23.61974 -22.97621 -22.48820 -22.35263 -21.72043 -20.43383 -19.95023 -18.85503 -18.35910 -17.90177 -17.82230 -17.55682 -17.21796 -17.06549 -16.78069 -16.67725 -16.48645 -16.20113 -16.13466 -15.92345 -15.61595 -15.44385 -15.17178 -15.13276 -14.64752 -14.54858 -14.48127 -13.74899 -13.72905 -13.61160 -13.44660 -13.35672 -13.32484 -13.13335 -12.88015 -12.46736 -12.30445 -12.24629 -12.02838 -11.81025 -11.66917 -11.64871 -11.62514 -11.06540 -11.00998 -10.86362 -10.57299 -10.51154 -10.21258 -9.69097 -9.09657 -4.92821 0.20869 0.31649 0.61438 1.32106 1.33356 1.44583 1.47983 1.55906 1.94849 1.96585 2.25766 2.56652 2.59258 3.09304 3.28342 3.43126 3.48337 3.50252 3.61407 3.67357 3.73549 3.81186 3.85378 3.97888 4.05984 4.07467 4.11825 4.16998 4.18339 4.28405 4.35585 4.41497 4.43263 4.47624 4.56936 4.60799 4.66847 4.69053 4.76280 4.80080 4.87352 4.93114 5.02905 5.12681 5.24412 5.28597 5.30208 5.40561 5.42484 5.48057 5.87654 6.14408 6.36590 6.45965 6.57541 7.07496 7.12962 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.329 6.329 3 C 0.164 3.836 4 C -0.250 4.250 5 C 0.178 3.822 6 O -0.304 6.304 7 C 0.033 3.967 8 C 0.512 3.488 9 O -0.571 6.571 10 N -0.706 5.706 11 C 0.133 3.867 12 C -0.098 4.098 13 H 0.133 0.867 14 C -0.128 4.128 15 C 0.121 3.879 16 H 0.133 0.867 17 N -0.369 5.369 18 C 0.255 3.745 19 N -0.581 5.581 20 C 0.188 3.812 21 N -0.353 5.353 22 C -0.137 4.137 23 C -0.196 4.196 24 C -0.076 4.076 25 O -0.549 6.549 26 Si 0.779 3.221 27 C -0.042 4.042 28 C -0.239 4.239 29 H 0.066 0.934 30 H 0.070 0.930 31 H 0.116 0.884 32 H 0.156 0.844 33 H 0.127 0.873 34 H 0.119 0.881 35 H 0.423 0.577 36 H 0.065 0.935 37 H 0.058 0.942 38 H 0.112 0.888 39 H 0.101 0.899 40 H 0.249 0.751 41 H 0.235 0.765 42 H 0.081 0.919 43 H 0.087 0.913 44 H 0.098 0.902 45 H 0.381 0.619 46 H -0.263 1.263 47 H -0.309 1.309 48 H 0.154 0.846 49 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.261 -7.167 -0.330 11.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.270 4.270 5 C 0.132 3.868 6 O -0.216 6.216 7 C -0.045 4.045 8 C 0.298 3.702 9 O -0.450 6.450 10 N -0.361 5.361 11 C 0.010 3.990 12 C -0.117 4.117 13 H 0.151 0.849 14 C -0.166 4.166 15 C 0.019 3.981 16 H 0.150 0.850 17 N -0.159 5.159 18 C -0.041 4.041 19 N -0.309 5.309 20 C -0.114 4.114 21 N -0.181 5.181 22 C -0.176 4.176 23 C -0.197 4.197 24 C -0.184 4.184 25 O -0.357 6.357 26 Si 0.683 3.317 27 C -0.059 4.059 28 C -0.257 4.257 29 H 0.085 0.915 30 H 0.089 0.911 31 H 0.135 0.865 32 H 0.173 0.827 33 H 0.144 0.856 34 H 0.137 0.863 35 H 0.261 0.739 36 H 0.083 0.917 37 H 0.077 0.923 38 H 0.131 0.869 39 H 0.120 0.880 40 H 0.265 0.735 41 H 0.251 0.749 42 H 0.100 0.900 43 H 0.106 0.894 44 H 0.116 0.884 45 H 0.230 0.770 46 H -0.189 1.189 47 H -0.237 1.237 48 H 0.172 0.828 49 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -8.221 -5.971 -0.110 10.161 hybrid contribution 0.206 -0.454 1.298 1.390 sum -8.015 -6.425 1.188 10.340 Atomic orbital electron populations 1.23397 0.76047 1.05702 1.02656 1.86053 1.23705 1.26564 1.87929 1.18880 0.91719 0.84919 0.92670 1.20559 0.93327 0.97446 1.15620 1.18565 0.81758 0.93116 0.93410 1.86225 1.15456 1.31816 1.88098 1.22766 0.88515 0.86443 1.06727 1.20454 0.88554 0.85183 0.75980 1.90795 1.80786 1.23436 1.49941 1.45604 1.05982 1.09602 1.74875 1.21313 0.78619 0.97000 1.02116 1.22506 0.93955 0.96683 0.98551 0.84945 1.23631 0.92231 1.03105 0.97681 1.23400 0.84580 1.01702 0.88421 0.84956 1.50767 1.08948 1.38439 1.17764 1.26606 0.99147 0.94177 0.84195 1.70585 1.01679 1.24749 1.33907 1.26523 1.01898 0.94445 0.88583 1.77988 0.91716 1.24460 1.23932 1.23427 0.95974 0.98173 1.00049 1.19594 0.93489 0.93988 1.12638 1.25131 1.06224 0.99706 0.87338 1.86650 1.38548 1.93069 1.17448 0.94130 0.75480 0.73464 0.88617 1.20937 0.92062 0.98782 0.94150 1.21393 1.01593 0.91297 1.11440 0.91547 0.91131 0.86534 0.82679 0.85585 0.86297 0.73905 0.91699 0.92334 0.86933 0.88043 0.73481 0.74861 0.89999 0.89448 0.88363 0.77031 1.18939 1.23741 0.82838 0.82637 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.12 9.81 113.37 1.11 0.99 16 2 O -0.33 0.18 10.49 -92.43 -0.97 -0.79 16 3 C 0.16 0.06 6.68 22.49 0.15 0.21 16 4 C -0.25 -0.12 8.97 22.46 0.20 0.08 16 5 C 0.18 0.73 6.66 22.49 0.15 0.88 16 6 O -0.30 -2.03 8.99 -73.43 -0.66 -2.69 16 7 C 0.03 -0.09 5.22 71.23 0.37 0.28 16 8 C 0.51 0.86 7.91 87.66 0.69 1.56 16 9 O -0.57 -8.15 16.50 16.00 0.26 -7.88 16 10 N -0.71 5.25 5.56 -463.04 -2.57 2.68 16 11 C 0.13 -0.84 5.50 86.38 0.47 -0.36 16 12 C -0.10 1.20 3.75 -10.27 -0.04 1.16 16 13 H 0.13 -2.14 8.14 -2.38 -0.02 -2.16 16 14 C -0.13 1.65 7.01 31.18 0.22 1.87 16 15 C 0.12 -0.81 5.07 45.57 0.23 -0.58 16 16 H 0.13 -1.02 8.14 -2.39 -0.02 -1.04 16 17 N -0.37 -0.38 3.83 -328.65 -1.26 -1.64 16 18 C 0.25 0.18 11.87 180.36 2.14 2.32 16 19 N -0.58 -4.14 11.19 -203.99 -2.28 -6.42 16 20 C 0.19 1.16 13.03 180.76 2.36 3.51 16 21 N -0.35 -2.57 12.70 -61.25 -0.78 -3.34 16 22 C -0.14 1.02 7.44 31.12 0.23 1.25 16 23 C -0.20 -0.66 5.27 -19.75 -0.10 -0.76 16 24 C -0.08 -0.41 2.37 71.24 0.17 -0.24 16 25 O -0.55 -5.12 12.88 -148.98 -1.92 -7.04 16 26 Si 0.78 0.22 30.24 68.60 2.07 2.29 16 27 C -0.04 0.04 8.65 22.24 0.19 0.23 16 28 C -0.24 0.45 9.04 22.38 0.20 0.65 16 29 H 0.07 -0.59 7.66 -2.39 -0.02 -0.61 16 30 H 0.07 -0.66 7.66 -2.39 -0.02 -0.68 16 31 H 0.12 -1.20 8.14 -2.39 -0.02 -1.22 16 32 H 0.16 -0.68 6.30 -2.91 -0.02 -0.70 16 33 H 0.13 -1.18 7.65 -2.39 -0.02 -1.19 16 34 H 0.12 -0.96 7.67 -2.39 -0.02 -0.97 16 35 H 0.42 -6.54 8.47 -92.71 -0.79 -7.33 16 36 H 0.06 -0.24 7.88 -2.38 -0.02 -0.26 16 37 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 38 H 0.11 -1.82 8.14 -2.39 -0.02 -1.84 16 39 H 0.10 -1.33 6.18 -2.39 -0.01 -1.35 16 40 H 0.25 -2.04 6.76 -2.91 -0.02 -2.06 16 41 H 0.24 -0.02 8.06 -2.91 -0.02 -0.05 16 42 H 0.08 -0.35 8.10 -2.39 -0.02 -0.37 16 43 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 44 H 0.10 0.81 7.82 -2.38 -0.02 0.80 16 45 H 0.38 0.72 8.70 -74.06 -0.64 0.08 16 46 H -0.26 -0.17 6.68 99.48 0.66 0.50 16 47 H -0.31 -2.73 7.11 99.48 0.71 -2.03 16 48 H 0.15 -0.75 4.85 -2.91 -0.01 -0.76 16 49 H 0.16 -1.07 6.29 -2.91 -0.02 -1.08 16 Total: 0.00 -37.12 409.33 0.24 -36.88 By element: Atomic # 1 Polarization: -24.69 SS G_CDS: -0.41 Total: -25.10 kcal Atomic # 6 Polarization: 4.29 SS G_CDS: 8.75 Total: 13.05 kcal Atomic # 7 Polarization: -1.83 SS G_CDS: -6.89 Total: -8.72 kcal Atomic # 8 Polarization: -15.11 SS G_CDS: -3.29 Total: -18.40 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: 2.07 Total: 2.29 kcal Total: -37.12 0.24 -36.88 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.888 kcal (2) G-P(sol) polarization free energy of solvation -37.120 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.237 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.883 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.005 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds