Wall clock time and date at job start Sun Mar 7 2021 07:32:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.47240 * 2 1 4 4 C 1.50703 * 109.47152 * 120.00127 * 2 1 3 5 5 C 1.34245 * 126.49618 * 254.97680 * 4 2 1 6 6 N 1.36835 * 109.93172 * 180.02562 * 5 4 2 7 7 C 1.46508 * 125.05637 * 179.97438 * 6 5 4 8 8 C 1.50698 * 109.47268 * 265.02687 * 7 6 5 9 9 O 1.21280 * 119.99790 * 0.02562 * 8 7 6 10 10 N 1.34773 * 119.99980 * 180.02562 * 8 7 6 11 11 C 1.46503 * 120.00036 * 179.97438 * 10 8 7 12 12 C 1.52992 * 109.47166 * 180.02562 * 11 10 8 13 13 H 1.09004 * 112.90752 * 316.24725 * 12 11 10 14 14 C 1.53784 * 113.61673 * 87.50094 * 12 11 10 15 15 C 1.53778 * 87.08081 * 139.98135 * 14 12 11 16 16 H 1.09004 * 113.61886 * 89.12045 * 15 14 12 17 17 N 1.46506 * 113.68980 * 220.00924 * 15 14 12 18 18 C 1.34424 * 126.82193 * 12.24454 * 17 15 14 19 19 N 1.30834 * 108.07549 * 179.89382 * 18 17 15 20 20 C 1.33238 * 109.82945 * 0.38097 * 19 18 17 21 21 N 1.30713 * 108.94736 * 359.76325 * 20 19 18 22 22 C 1.53778 * 87.08449 * 334.56700 * 15 14 12 23 23 C 1.37684 * 109.88200 * 0.22932 * 6 5 4 24 24 C 1.39084 * 133.51395 * 180.39965 * 23 6 5 25 25 C 1.37791 * 119.77844 * 179.64854 * 24 23 6 26 26 C 1.38784 * 120.66556 * 359.75049 * 25 24 23 27 27 C 1.36657 * 120.53029 * 0.02562 * 26 25 24 28 28 C 1.39589 * 119.76677 * 359.97438 * 27 26 25 29 29 H 0.96701 * 113.99844 * 60.00569 * 1 2 3 30 30 H 1.09004 * 109.47315 * 239.99359 * 2 1 3 31 31 H 1.48501 * 109.99667 * 298.68215 * 3 2 1 32 32 H 1.48498 * 109.99834 * 59.99857 * 3 2 1 33 33 H 1.07994 * 125.03124 * 0.02562 * 5 4 2 34 34 H 1.08998 * 109.46450 * 145.02468 * 7 6 5 35 35 H 1.08995 * 109.47033 * 25.02925 * 7 6 5 36 36 H 0.97004 * 119.99934 * 359.97438 * 10 8 7 37 37 H 1.08996 * 109.47072 * 59.99516 * 11 10 8 38 38 H 1.09007 * 109.46579 * 299.99681 * 11 10 8 39 39 H 1.08993 * 113.61313 * 254.52732 * 14 12 11 40 40 H 1.09000 * 113.61578 * 25.43464 * 14 12 11 41 41 H 1.08004 * 125.96425 * 0.03950 * 18 17 15 42 42 H 1.08001 * 125.52566 * 179.72180 * 20 19 18 43 43 H 1.08998 * 113.61879 * 270.88747 * 22 15 14 44 44 H 1.08999 * 113.61887 * 139.97854 * 22 15 14 45 45 H 1.07997 * 120.10721 * 359.39728 * 24 23 6 46 46 H 1.08001 * 119.66485 * 179.72723 * 25 24 23 47 47 H 1.08002 * 119.73267 * 180.02562 * 26 25 24 48 48 H 1.08008 * 120.11750 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4613 -0.1376 2.3228 6 7 2.8036 -1.0991 3.2342 7 6 3.4094 -0.8404 4.5429 8 6 4.9076 -0.9625 4.4359 9 8 5.4191 -1.2379 3.3713 10 7 5.6791 -0.7656 5.5233 11 6 7.1356 -0.8848 5.4194 12 6 7.7681 -0.6158 6.7863 13 1 7.3291 0.2422 7.2955 14 6 7.8770 -1.8683 7.6719 15 6 9.2591 -1.3484 8.1012 16 1 9.2278 -0.6908 8.9699 17 7 10.2727 -2.3996 8.2198 18 6 10.1739 -3.6670 7.7828 19 7 11.2883 -4.2860 8.0773 20 6 12.1154 -3.4526 8.7070 21 7 11.5382 -2.2851 8.8180 22 6 9.3056 -0.5965 6.7606 23 6 2.4994 -2.3460 2.7361 24 6 2.6303 -3.6362 3.2388 25 6 2.2167 -4.7108 2.4820 26 6 1.6649 -4.5194 1.2230 27 6 1.5228 -3.2602 0.7115 28 6 1.9350 -2.1571 1.4610 29 1 -0.3933 0.4416 -0.7651 30 1 1.7924 -0.5139 -0.8899 31 1 1.5879 2.4585 -1.2242 32 1 1.5615 2.4678 1.2085 33 1 2.5972 0.9247 2.4616 34 1 3.0364 -1.5661 5.2656 35 1 3.1494 0.1659 4.8711 36 1 5.2700 -0.5449 6.3747 37 1 7.5089 -0.1592 4.6967 38 1 7.3952 -1.8913 5.0911 39 1 7.1492 -1.8943 8.4828 40 1 7.9170 -2.8000 7.1076 41 1 9.3239 -4.0984 7.2749 42 1 13.1024 -3.7016 9.0679 43 1 9.7360 -1.1804 5.9470 44 1 9.7309 0.4043 6.8357 45 1 3.0585 -3.7954 4.2174 46 1 2.3233 -5.7121 2.8724 47 1 1.3454 -5.3725 0.6429 48 1 1.0929 -3.1189 -0.2692 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567722_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:32:21 Heat of formation + Delta-G solvation = 133.424973 kcal Electronic energy + Delta-G solvation = -31889.117396 eV Core-core repulsion = 27528.801122 eV Total energy + Delta-G solvation = -4360.316274 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 2.85 seconds Orbital eigenvalues (eV) -43.15640 -42.47458 -41.05940 -40.10460 -37.98925 -37.63461 -35.93703 -34.20473 -33.52021 -32.15990 -31.49387 -30.18925 -29.83891 -28.31608 -27.32926 -25.81020 -24.98231 -23.61530 -23.00189 -22.66161 -22.44384 -21.74679 -20.74242 -20.43384 -18.98434 -18.38439 -18.26095 -18.04354 -17.67676 -17.37138 -16.91575 -16.63609 -16.33795 -16.21936 -16.00261 -15.68562 -15.52064 -15.30445 -15.08805 -14.74835 -14.68351 -14.57866 -14.40644 -14.03560 -13.94724 -13.94456 -13.65157 -13.44330 -13.34805 -12.94542 -12.67439 -12.60788 -12.45512 -12.38402 -12.14047 -12.00412 -11.97849 -11.61023 -11.15644 -10.97745 -10.78142 -10.65029 -10.41706 -10.36476 -10.27960 -9.01638 -8.52739 -4.90297 0.28188 0.60961 0.79384 1.21096 1.34022 1.35136 1.41821 1.60803 1.65188 1.97239 2.01336 2.05694 2.77565 2.91669 3.09447 3.17933 3.24877 3.32490 3.43545 3.44930 3.65307 3.65928 3.71696 3.80091 3.85147 3.86902 3.96207 4.02911 4.07577 4.18759 4.27489 4.31861 4.35465 4.37520 4.44430 4.45954 4.51216 4.61405 4.70080 4.79570 4.83633 4.90738 4.99592 5.10691 5.25556 5.28902 5.44477 5.64724 5.76805 5.80548 5.85688 5.89930 6.08155 6.28417 6.36466 6.60011 6.93126 7.10659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.037 4.037 3 Si 0.679 3.321 4 C -0.150 4.150 5 C 0.071 3.929 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.490 3.510 9 O -0.510 6.510 10 N -0.729 5.729 11 C 0.133 3.867 12 C -0.118 4.118 13 H 0.110 0.890 14 C -0.141 4.141 15 C 0.133 3.867 16 H 0.128 0.872 17 N -0.371 5.371 18 C 0.253 3.747 19 N -0.544 5.544 20 C 0.199 3.801 21 N -0.320 5.320 22 C -0.135 4.135 23 C 0.109 3.891 24 C -0.127 4.127 25 C -0.097 4.097 26 C -0.146 4.146 27 C -0.065 4.065 28 C -0.086 4.086 29 H 0.375 0.625 30 H 0.072 0.928 31 H -0.259 1.259 32 H -0.255 1.255 33 H 0.169 0.831 34 H 0.118 0.882 35 H 0.122 0.878 36 H 0.403 0.597 37 H 0.076 0.924 38 H 0.073 0.927 39 H 0.090 0.910 40 H 0.097 0.903 41 H 0.216 0.784 42 H 0.218 0.782 43 H 0.095 0.905 44 H 0.088 0.912 45 H 0.115 0.885 46 H 0.125 0.875 47 H 0.123 0.877 48 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.119 3.076 3.138 4.535 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.148 4.148 3 Si 0.580 3.420 4 C -0.157 4.157 5 C -0.054 4.054 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.274 3.726 9 O -0.384 6.384 10 N -0.383 5.383 11 C 0.009 3.991 12 C -0.138 4.138 13 H 0.128 0.872 14 C -0.179 4.179 15 C 0.030 3.970 16 H 0.145 0.855 17 N -0.161 5.161 18 C -0.044 4.044 19 N -0.271 5.271 20 C -0.104 4.104 21 N -0.146 5.146 22 C -0.174 4.174 23 C 0.005 3.995 24 C -0.148 4.148 25 C -0.116 4.116 26 C -0.165 4.165 27 C -0.083 4.083 28 C -0.090 4.090 29 H 0.223 0.777 30 H 0.090 0.910 31 H -0.184 1.184 32 H -0.180 1.180 33 H 0.186 0.814 34 H 0.136 0.864 35 H 0.140 0.860 36 H 0.237 0.763 37 H 0.094 0.906 38 H 0.091 0.909 39 H 0.109 0.891 40 H 0.115 0.885 41 H 0.232 0.768 42 H 0.235 0.765 43 H 0.113 0.887 44 H 0.107 0.893 45 H 0.133 0.867 46 H 0.143 0.857 47 H 0.141 0.859 48 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -0.346 3.827 3.463 5.173 hybrid contribution -1.344 -0.006 -0.016 1.344 sum -1.690 3.821 3.447 5.417 Atomic orbital electron populations 1.86642 1.18335 1.80006 1.49381 1.24017 0.83791 1.09790 0.97173 0.95105 0.91785 0.74644 0.80506 1.19425 1.08524 0.91619 0.96136 1.21502 1.01066 0.93919 0.88885 1.43177 1.52768 1.04636 1.14400 1.21582 0.90659 1.05888 0.85291 1.21022 0.89522 0.77621 0.84421 1.90828 1.74621 1.45304 1.27613 1.45928 1.07289 1.72935 1.12180 1.21330 0.78916 1.02702 0.96142 1.22620 0.96363 0.98883 0.95884 0.87238 1.23593 0.94885 0.98984 1.00443 1.23002 0.85117 0.88872 1.00035 0.85460 1.50567 1.12696 1.10253 1.42633 1.25968 0.98521 0.82686 0.97196 1.70602 1.02380 1.33870 1.20244 1.26098 1.00834 0.86563 0.96872 1.78085 0.92792 1.23437 1.20308 1.23448 0.94977 1.02318 0.96628 1.18147 1.01312 0.85850 0.94189 1.19939 1.05073 0.89214 1.00566 1.20820 0.98370 0.97929 0.94486 1.20661 1.02461 0.96892 0.96456 1.20274 0.98002 0.90941 0.99113 1.18943 1.03244 0.92748 0.94073 0.77738 0.90987 1.18413 1.17959 0.81412 0.86393 0.85966 0.76297 0.90578 0.90860 0.89091 0.88477 0.76819 0.76542 0.88654 0.89283 0.86729 0.85707 0.85926 0.86087 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.30 12.86 -35.23 -0.45 -1.75 16 2 C -0.04 -0.05 3.05 36.01 0.11 0.06 16 3 Si 0.68 -0.17 30.79 -169.99 -5.23 -5.41 16 4 C -0.15 -0.48 5.61 -102.71 -0.58 -1.06 16 5 C 0.07 0.12 9.89 -16.73 -0.17 -0.05 16 6 N -0.47 -0.62 2.27 -115.71 -0.26 -0.88 16 7 C 0.09 -0.28 6.48 -5.19 -0.03 -0.31 16 8 C 0.49 -0.66 7.90 -10.99 -0.09 -0.74 16 9 O -0.51 -1.94 16.42 5.56 0.09 -1.85 16 10 N -0.73 3.46 5.56 -60.30 -0.33 3.13 16 11 C 0.13 -0.56 5.51 -4.04 -0.02 -0.58 16 12 C -0.12 0.74 3.75 -89.81 -0.34 0.40 16 13 H 0.11 -0.82 8.14 -51.93 -0.42 -1.25 16 14 C -0.14 0.85 7.00 -25.92 -0.18 0.67 16 15 C 0.13 -0.47 5.07 -67.12 -0.34 -0.81 16 16 H 0.13 -0.49 8.14 -51.93 -0.42 -0.92 16 17 N -0.37 -0.01 3.83 -55.32 -0.21 -0.22 16 18 C 0.25 -0.01 11.87 -90.66 -1.08 -1.09 16 19 N -0.54 -1.55 11.19 -15.83 -0.18 -1.73 16 20 C 0.20 0.43 13.03 -91.82 -1.20 -0.76 16 21 N -0.32 -0.89 12.70 29.29 0.37 -0.52 16 22 C -0.13 0.59 7.44 -25.92 -0.19 0.39 16 23 C 0.11 0.38 6.80 -83.99 -0.57 -0.19 16 24 C -0.13 -0.29 10.00 -39.43 -0.39 -0.68 16 25 C -0.10 -0.19 10.01 -39.54 -0.40 -0.59 16 26 C -0.15 -0.36 9.97 -39.95 -0.40 -0.76 16 27 C -0.06 -0.23 10.05 -39.65 -0.40 -0.63 16 28 C -0.09 -0.38 6.35 -105.14 -0.67 -1.05 16 29 H 0.38 -0.66 8.74 45.56 0.40 -0.26 16 30 H 0.07 0.03 7.96 -51.93 -0.41 -0.38 16 31 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 32 H -0.25 -0.45 7.04 56.52 0.40 -0.05 16 33 H 0.17 -0.17 6.30 -52.49 -0.33 -0.50 16 34 H 0.12 -0.61 8.14 -51.93 -0.42 -1.03 16 35 H 0.12 -0.74 8.12 -51.93 -0.42 -1.16 16 36 H 0.40 -3.17 8.47 -40.82 -0.35 -3.51 16 37 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 38 H 0.07 -0.22 7.84 -51.93 -0.41 -0.62 16 39 H 0.09 -0.63 8.14 -51.93 -0.42 -1.06 16 40 H 0.10 -0.60 6.15 -51.93 -0.32 -0.92 16 41 H 0.22 -0.86 6.75 -52.48 -0.35 -1.21 16 42 H 0.22 -0.22 8.06 -52.49 -0.42 -0.64 16 43 H 0.09 -0.31 8.10 -51.93 -0.42 -0.73 16 44 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 45 H 0.11 0.01 8.06 -52.49 -0.42 -0.42 16 46 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 47 H 0.12 0.06 8.06 -52.49 -0.42 -0.37 16 48 H 0.12 0.29 8.06 -52.48 -0.42 -0.14 16 LS Contribution 407.11 15.07 6.14 6.14 Total: 0.00 -14.48 407.11 -13.47 -27.95 By element: Atomic # 1 Polarization: -10.60 SS G_CDS: -6.47 Total: -17.07 kcal Atomic # 6 Polarization: -0.86 SS G_CDS: -6.92 Total: -7.78 kcal Atomic # 7 Polarization: 0.40 SS G_CDS: -0.61 Total: -0.21 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.36 Total: -3.60 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.23 Total: -5.41 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -14.48 -13.47 -27.95 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 161.370 kcal (2) G-P(sol) polarization free energy of solvation -14.479 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 146.891 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.466 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.945 kcal (6) G-S(sol) free energy of system = (1) + (5) 133.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.85 seconds