Wall clock time and date at job start Sun Mar 7 2021 09:43:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86300 * 109.47269 * 2 1 4 4 C 1.50697 * 109.47039 * 239.99607 * 2 1 3 5 5 C 1.34463 * 126.48005 * 104.95754 * 4 2 1 6 6 N 1.36561 * 109.98616 * 180.02562 * 5 4 2 7 7 C 1.37834 * 109.85970 * 359.97438 * 6 5 4 8 8 C 1.38651 * 133.37939 * 180.28301 * 7 6 5 9 9 C 1.39318 * 119.66521 * 180.19711 * 8 7 6 10 10 C 1.47575 * 119.83295 * 179.77089 * 9 8 7 11 11 O 1.21589 * 119.99972 * 359.72109 * 10 9 8 12 12 N 1.34776 * 120.00054 * 179.72673 * 10 9 8 13 13 C 1.46499 * 119.99999 * 179.97438 * 12 10 9 14 14 H 1.08993 * 112.84964 * 23.80229 * 13 12 10 15 15 C 1.53783 * 113.61210 * 154.99616 * 13 12 10 16 16 C 1.53786 * 87.08050 * 89.20097 * 15 13 12 17 17 H 1.09002 * 113.61357 * 270.88070 * 16 15 13 18 18 N 1.46497 * 113.61643 * 140.06125 * 16 15 13 19 19 C 1.35318 * 125.87127 * 276.24653 * 18 16 15 20 20 C 1.35351 * 106.17623 * 179.90280 * 19 18 16 21 21 N 1.33771 * 106.49763 * 0.35159 * 20 19 18 22 22 N 1.28644 * 108.88686 * 359.77167 * 21 20 19 23 23 C 1.53781 * 87.17350 * 25.47154 * 16 15 13 24 24 C 1.40208 * 120.33440 * 359.49179 * 9 8 7 25 25 C 1.36231 * 120.37934 * 0.25460 * 24 9 8 26 26 C 1.39875 * 119.95846 * 359.97438 * 25 24 9 27 27 H 0.96694 * 114.00251 * 59.99695 * 1 2 3 28 28 H 1.09002 * 109.46934 * 120.00228 * 2 1 3 29 29 H 1.48499 * 109.99857 * 298.67866 * 3 2 1 30 30 H 1.48502 * 109.99826 * 60.00137 * 3 2 1 31 31 H 1.07994 * 125.00222 * 0.02562 * 5 4 2 32 32 H 0.96993 * 125.07105 * 180.02562 * 6 5 4 33 33 H 1.07997 * 120.16683 * 359.94835 * 8 7 6 34 34 H 0.96999 * 119.99974 * 359.97438 * 12 10 9 35 35 H 1.08992 * 113.61796 * 334.64954 * 15 13 12 36 36 H 1.09005 * 113.68996 * 203.75566 * 15 13 12 37 37 H 1.07996 * 126.90574 * 0.02562 * 19 18 16 38 38 H 1.07993 * 126.75227 * 180.12470 * 20 19 18 39 39 H 1.08999 * 113.61567 * 89.07405 * 23 16 15 40 40 H 1.08998 * 113.61196 * 219.97759 * 23 16 15 41 41 H 1.08002 * 119.81025 * 180.27617 * 24 9 8 42 42 H 1.07998 * 120.01919 * 180.02562 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4609 -0.1363 -2.3249 6 7 2.8024 -1.0947 -3.2358 7 6 2.4947 -2.3432 -2.7396 8 6 2.6360 -3.6284 -3.2404 9 6 2.2141 -4.7157 -2.4783 10 6 2.3580 -6.0848 -3.0099 11 8 2.8390 -6.2614 -4.1125 12 7 1.9560 -7.1394 -2.2733 13 6 2.0984 -8.4985 -2.8012 14 1 2.8768 -8.5785 -3.5599 15 6 2.1895 -9.5772 -1.7090 16 6 0.6551 -9.6586 -1.7716 17 1 0.1532 -8.9647 -1.0973 18 7 0.1353 -11.0247 -1.6723 19 6 0.0148 -11.9035 -2.6943 20 6 -0.5022 -13.0345 -2.1600 21 7 -0.6778 -12.7929 -0.8561 22 7 -0.2904 -11.5934 -0.5989 23 6 0.7628 -9.1441 -3.2168 24 6 1.6588 -4.5161 -1.2064 25 6 1.5213 -3.2571 -0.7046 26 6 1.9358 -2.1550 -1.4597 27 1 -0.3933 0.4417 -0.7650 28 1 1.7923 -0.5139 0.8900 29 1 1.5880 2.4585 -1.2243 30 1 1.5615 2.4678 1.2085 31 1 2.5961 0.9262 -2.4631 32 1 3.2026 -0.9225 -4.1024 33 1 3.0671 -3.7855 -4.2180 34 1 1.5725 -6.9986 -1.3935 35 1 2.5685 -9.2044 -0.7576 36 1 2.6888 -10.4897 -2.0352 37 1 0.2800 -11.7366 -3.7278 38 1 -0.7316 -13.9505 -2.6841 39 1 0.8728 -9.9377 -3.9558 40 1 -0.0092 -8.4217 -3.4817 41 1 1.3387 -5.3654 -0.6210 42 1 1.0932 -3.1101 0.2760 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_12335838.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:43:28 Heat of formation + Delta-G solvation = 136.626831 kcal Electronic energy + Delta-G solvation = -27826.721236 eV Core-core repulsion = 23777.619043 eV Total energy + Delta-G solvation = -4049.102193 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.132 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -44.21665 -42.57598 -41.48276 -39.75858 -38.01325 -37.55967 -35.26221 -33.45978 -33.32571 -31.95174 -30.81136 -30.62311 -27.33207 -27.05163 -26.54524 -24.88930 -23.72263 -23.54642 -22.89344 -21.77341 -20.93780 -20.73313 -19.61269 -19.02736 -18.39412 -17.80418 -17.41034 -17.20033 -17.03336 -16.36750 -16.24480 -16.05960 -15.91063 -15.73953 -15.48348 -15.20087 -15.05799 -14.84952 -14.81105 -14.50969 -14.04108 -13.98855 -13.94621 -13.50698 -13.19462 -12.74299 -12.67905 -12.54384 -12.46225 -12.26803 -12.11748 -11.85413 -11.69290 -11.11585 -10.99196 -10.84316 -10.54870 -10.38545 -10.30636 -9.44780 -8.90353 -5.02167 -0.36805 0.30692 0.63790 1.23614 1.27389 1.31367 1.49454 1.69357 1.70217 1.83936 1.92031 2.02749 2.73074 2.80806 2.94694 3.26862 3.40911 3.41352 3.48008 3.54488 3.61104 3.67660 3.77296 3.98910 4.02968 4.08276 4.16259 4.22485 4.25857 4.32765 4.35027 4.39791 4.46366 4.48957 4.50745 4.60195 4.69697 4.77987 4.90735 5.12223 5.20177 5.24661 5.34755 5.40868 5.53240 5.62425 5.89799 6.24783 6.27926 6.43650 7.03285 7.60857 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.038 4.038 3 Si 0.684 3.316 4 C -0.206 4.206 5 C 0.075 3.925 6 N -0.583 5.583 7 C 0.081 3.919 8 C -0.054 4.054 9 C -0.124 4.124 10 C 0.570 3.430 11 O -0.532 6.532 12 N -0.714 5.714 13 C 0.131 3.869 14 H 0.122 0.878 15 C -0.148 4.148 16 C 0.114 3.886 17 H 0.134 0.866 18 N -0.282 5.282 19 C -0.051 4.051 20 C -0.050 4.050 21 N -0.271 5.271 22 N -0.086 5.086 23 C -0.155 4.155 24 C -0.114 4.114 25 C -0.071 4.071 26 C -0.061 4.061 27 H 0.374 0.626 28 H 0.115 0.885 29 H -0.260 1.260 30 H -0.256 1.256 31 H 0.177 0.823 32 H 0.422 0.578 33 H 0.137 0.863 34 H 0.404 0.596 35 H 0.095 0.905 36 H 0.109 0.891 37 H 0.190 0.810 38 H 0.191 0.809 39 H 0.108 0.892 40 H 0.094 0.906 41 H 0.125 0.875 42 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.622 4.828 -2.875 6.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.585 3.415 4 C -0.214 4.214 5 C -0.053 4.053 6 N -0.185 5.185 7 C -0.025 4.025 8 C -0.075 4.075 9 C -0.129 4.129 10 C 0.359 3.641 11 O -0.409 6.409 12 N -0.366 5.366 13 C 0.024 3.976 14 H 0.140 0.860 15 C -0.187 4.187 16 C 0.012 3.988 17 H 0.152 0.848 18 N -0.075 5.075 19 C -0.201 4.201 20 C -0.207 4.207 21 N -0.137 5.137 22 N -0.065 5.065 23 C -0.194 4.194 24 C -0.134 4.134 25 C -0.089 4.089 26 C -0.066 4.066 27 H 0.221 0.779 28 H 0.133 0.867 29 H -0.185 1.185 30 H -0.180 1.180 31 H 0.194 0.806 32 H 0.260 0.740 33 H 0.154 0.846 34 H 0.240 0.760 35 H 0.113 0.887 36 H 0.127 0.873 37 H 0.207 0.793 38 H 0.208 0.792 39 H 0.127 0.873 40 H 0.113 0.887 41 H 0.143 0.857 42 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 3.653 5.437 -1.698 6.767 hybrid contribution -0.929 -0.088 -1.774 2.004 sum 2.723 5.349 -3.472 6.934 Atomic orbital electron populations 1.86612 1.18026 1.79916 1.49096 1.24294 0.83414 1.09919 0.97216 0.95170 0.91474 0.74274 0.80571 1.20685 1.10544 0.92062 0.98093 1.21843 0.99594 0.94538 0.89362 1.41728 1.54614 1.04009 1.18169 1.18078 1.03268 0.86302 0.94875 1.20070 0.99220 0.88069 1.00130 1.19332 1.05531 0.92017 0.95973 1.18160 0.76942 0.84498 0.84494 1.90809 1.44012 1.86087 1.19974 1.45584 1.64873 1.05010 1.21144 1.21634 0.98099 0.80749 0.97117 0.85980 1.23845 0.93540 1.00213 1.01132 1.23535 0.95738 0.78656 1.00836 0.84820 1.47497 1.40822 1.12860 1.06355 1.23612 1.08493 0.91190 0.96847 1.23687 1.04979 1.00249 0.91791 1.75165 1.16966 1.06526 1.15039 1.78349 1.14435 1.03438 1.10288 1.24027 0.99615 1.01483 0.94321 1.20669 1.00694 0.97382 0.94607 1.20215 0.98535 0.90440 0.99735 1.19182 1.00829 0.93071 0.93518 0.77869 0.86676 1.18492 1.18015 0.80641 0.73969 0.84556 0.75979 0.88663 0.87300 0.79311 0.79216 0.87344 0.88746 0.85679 0.85060 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.29 12.88 -35.23 -0.45 -0.74 16 2 C -0.04 0.04 3.06 36.00 0.11 0.15 16 3 Si 0.68 -1.63 30.82 -169.99 -5.24 -6.87 16 4 C -0.21 0.16 5.57 -102.74 -0.57 -0.41 16 5 C 0.08 -0.18 10.43 -16.78 -0.17 -0.36 16 6 N -0.58 1.26 6.07 -10.68 -0.06 1.19 16 7 C 0.08 0.02 7.26 -84.00 -0.61 -0.59 16 8 C -0.05 -0.04 9.61 -39.03 -0.37 -0.41 16 9 C -0.12 -0.04 5.87 -104.95 -0.62 -0.65 16 10 C 0.57 0.44 7.76 -12.45 -0.10 0.34 16 11 O -0.53 -2.24 15.91 5.29 0.08 -2.16 16 12 N -0.71 1.77 5.22 -53.91 -0.28 1.49 16 13 C 0.13 -0.40 4.33 -66.97 -0.29 -0.69 16 14 H 0.12 -0.22 7.46 -51.93 -0.39 -0.61 16 15 C -0.15 0.54 7.63 -25.92 -0.20 0.34 16 16 C 0.11 -0.31 4.83 -67.12 -0.32 -0.64 16 17 H 0.13 -0.49 8.14 -51.93 -0.42 -0.91 16 18 N -0.28 -0.16 3.53 -53.97 -0.19 -0.35 16 19 C -0.05 0.03 10.78 -17.04 -0.18 -0.15 16 20 C -0.05 -0.07 12.05 -17.74 -0.21 -0.28 16 21 N -0.27 -1.41 12.41 30.23 0.38 -1.03 16 22 N -0.09 -0.38 13.17 60.35 0.79 0.42 16 23 C -0.15 0.57 7.26 -25.78 -0.19 0.39 16 24 C -0.11 0.13 9.46 -39.56 -0.37 -0.24 16 25 C -0.07 0.01 10.03 -39.69 -0.40 -0.39 16 26 C -0.06 -0.04 6.35 -105.04 -0.67 -0.71 16 27 H 0.37 -0.84 8.70 45.56 0.40 -0.44 16 28 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 29 H -0.26 0.28 6.99 56.52 0.40 0.68 16 30 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 31 H 0.18 -0.89 6.27 -52.49 -0.33 -1.22 16 32 H 0.42 -2.03 8.96 -40.82 -0.37 -2.39 16 33 H 0.14 0.06 7.62 -52.49 -0.40 -0.34 16 34 H 0.40 -1.91 6.69 -40.82 -0.27 -2.18 16 35 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 36 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 37 H 0.19 -0.84 6.74 -52.49 -0.35 -1.19 16 38 H 0.19 -0.31 8.06 -52.49 -0.42 -0.73 16 39 H 0.11 -0.52 6.33 -51.93 -0.33 -0.84 16 40 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 41 H 0.13 -0.51 6.36 -52.49 -0.33 -0.84 16 42 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 LS Contribution 358.16 15.07 5.40 5.40 Total: 0.00 -12.15 358.16 -9.28 -21.43 By element: Atomic # 1 Polarization: -9.94 SS G_CDS: -4.53 Total: -14.47 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -5.17 Total: -4.30 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: 0.63 Total: 1.71 kcal Atomic # 8 Polarization: -2.53 SS G_CDS: -0.37 Total: -2.90 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.24 Total: -6.87 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -12.15 -9.28 -21.43 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_12335838.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 158.054 kcal (2) G-P(sol) polarization free energy of solvation -12.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 145.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.428 kcal (6) G-S(sol) free energy of system = (1) + (5) 136.627 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds