Wall clock time and date at job start Sun Mar 7 2021 09:43:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86294 * 109.47433 * 2 1 4 4 C 1.50692 * 109.47049 * 239.99575 * 2 1 3 5 5 C 1.37951 * 119.92652 * 300.25929 * 4 2 1 6 6 C 1.39593 * 119.87647 * 180.23320 * 5 4 2 7 7 C 1.47849 * 120.13992 * 179.78833 * 6 5 4 8 8 O 1.21551 * 119.99962 * 359.72746 * 7 6 5 9 9 N 1.34769 * 119.99989 * 179.72197 * 7 6 5 10 10 C 1.46505 * 120.00057 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.84598 * 336.19058 * 10 9 7 12 12 C 1.53782 * 113.69424 * 107.46619 * 10 9 7 13 13 C 1.53775 * 87.08206 * 139.99207 * 12 10 9 14 14 H 1.09004 * 113.68928 * 220.00601 * 13 12 10 15 15 N 1.46499 * 113.61774 * 89.11432 * 13 12 10 16 16 C 1.35315 * 125.86406 * 347.50567 * 15 13 12 17 17 C 1.35357 * 106.17188 * 179.97438 * 16 15 13 18 18 N 1.33771 * 106.49776 * 359.97438 * 17 16 15 19 19 N 1.28636 * 108.88559 * 0.02562 * 18 17 16 20 20 C 1.53778 * 87.08266 * 334.56802 * 13 12 10 21 21 C 1.39549 * 119.71905 * 359.51382 * 6 5 4 22 22 C 1.38063 * 119.84063 * 0.25655 * 21 6 5 23 23 Br 1.89104 * 119.93653 * 180.02562 * 22 21 6 24 24 C 1.38363 * 119.92548 * 120.00524 * 4 2 1 25 25 H 0.96705 * 114.00004 * 300.00860 * 1 2 3 26 26 H 1.09001 * 109.46440 * 119.99660 * 2 1 3 27 27 H 1.48508 * 109.99931 * 299.99872 * 3 2 1 28 28 H 1.48498 * 110.00337 * 61.31643 * 3 2 1 29 29 H 1.08009 * 120.05946 * 0.02562 * 5 4 2 30 30 H 0.97001 * 120.00135 * 0.02562 * 9 7 6 31 31 H 1.08996 * 113.60956 * 25.43774 * 12 10 9 32 32 H 1.09002 * 113.61054 * 254.54323 * 12 10 9 33 33 H 1.07996 * 126.91369 * 359.70497 * 16 15 13 34 34 H 1.08004 * 126.74923 * 180.02562 * 17 16 15 35 35 H 1.08999 * 113.61842 * 139.98790 * 20 13 12 36 36 H 1.09004 * 113.61537 * 270.80332 * 20 13 12 37 37 H 1.07995 * 120.07536 * 180.27298 * 21 6 5 38 38 H 1.08002 * 119.85280 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5927 -2.0296 -1.4498 6 6 2.0626 -2.6882 -2.5874 7 6 1.7071 -4.1034 -2.8259 8 8 1.0084 -4.6973 -2.0281 9 7 2.1577 -4.7348 -3.9280 10 6 1.8050 -6.1369 -4.1646 11 1 1.5516 -6.6700 -3.2483 12 6 0.7816 -6.3344 -5.2954 13 6 1.6044 -7.5624 -5.7191 14 1 1.7047 -7.6710 -6.7991 15 7 1.1901 -8.8028 -5.0588 16 6 0.3619 -8.8949 -3.9927 17 6 0.2523 -10.2148 -3.7134 18 7 1.0083 -10.8571 -4.6108 19 7 1.5506 -9.9922 -5.3936 20 6 2.8133 -6.8842 -5.0532 21 6 2.8645 -2.0035 -3.5014 22 6 3.1923 -0.6820 -3.2727 23 35 4.2783 0.2486 -4.5099 24 6 2.7268 -0.0367 -2.1401 25 1 -0.3933 0.4418 0.7650 26 1 1.7922 -0.5138 0.8901 27 1 1.5616 2.4678 -1.2086 28 1 1.5880 2.4586 1.2242 29 1 0.9679 -2.5529 -0.7409 30 1 2.7155 -4.2609 -4.5645 31 1 0.7848 -5.5312 -6.0322 32 1 -0.2192 -6.5805 -4.9404 33 1 -0.1123 -8.0792 -3.4673 34 1 -0.3315 -10.6616 -2.9221 35 1 3.4528 -7.5744 -4.5030 36 1 3.3728 -6.2325 -5.7243 37 1 3.2275 -2.5061 -4.3857 38 1 2.9859 0.9972 -1.9655 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_12335870.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:43:50 Heat of formation + Delta-G solvation = 109.115669 kcal Electronic energy + Delta-G solvation = -25345.386999 eV Core-core repulsion = 21432.689641 eV Total energy + Delta-G solvation = -3912.697358 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.032 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -44.30059 -41.81808 -40.71788 -39.43453 -37.89689 -35.48299 -33.82547 -33.72055 -32.74863 -31.94790 -30.57339 -27.41653 -27.37799 -27.01509 -25.15231 -23.54959 -23.14529 -22.79430 -21.69607 -21.09521 -19.13706 -18.73600 -18.56835 -17.93273 -17.71592 -17.24659 -16.75674 -16.44180 -16.27252 -16.07272 -15.58724 -15.58024 -15.25703 -14.92504 -14.79954 -14.42540 -14.09129 -14.00325 -13.93265 -13.79640 -13.72679 -12.89839 -12.68348 -12.55696 -12.49964 -12.12792 -12.07285 -11.93993 -11.81039 -11.58516 -11.22347 -11.02399 -10.76396 -10.49068 -10.31337 -10.28654 -9.99187 -5.14314 -0.60621 -0.25410 0.31983 0.60954 1.04835 1.20928 1.41785 1.44432 1.68824 1.73842 1.80572 2.34484 2.65032 2.90645 2.96961 3.15862 3.27300 3.39736 3.46981 3.59182 3.63518 3.76379 3.87615 3.93667 4.02561 4.02994 4.12481 4.14498 4.19394 4.30377 4.34434 4.37251 4.45272 4.59230 4.65486 4.75698 4.82868 4.99862 5.06778 5.23935 5.29304 5.60941 6.11984 6.24489 6.88001 7.58769 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.076 4.076 3 Si 0.676 3.324 4 C -0.072 4.072 5 C -0.015 4.015 6 C -0.131 4.131 7 C 0.566 3.434 8 O -0.524 6.524 9 N -0.715 5.715 10 C 0.121 3.879 11 H 0.123 0.877 12 C -0.154 4.154 13 C 0.117 3.883 14 H 0.133 0.867 15 N -0.278 5.278 16 C -0.051 4.051 17 C -0.048 4.048 18 N -0.268 5.268 19 N -0.082 5.082 20 C -0.149 4.149 21 C -0.054 4.054 22 C -0.094 4.094 23 Br -0.031 7.031 24 C -0.060 4.060 25 H 0.385 0.615 26 H 0.085 0.915 27 H -0.250 1.250 28 H -0.254 1.254 29 H 0.148 0.852 30 H 0.404 0.596 31 H 0.117 0.883 32 H 0.091 0.909 33 H 0.191 0.809 34 H 0.192 0.808 35 H 0.091 0.909 36 H 0.116 0.884 37 H 0.139 0.861 38 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.560 6.233 0.505 6.757 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.576 3.424 4 C -0.073 4.073 5 C -0.034 4.034 6 C -0.135 4.135 7 C 0.353 3.647 8 O -0.400 6.400 9 N -0.367 5.367 10 C 0.015 3.985 11 H 0.141 0.859 12 C -0.194 4.194 13 C 0.014 3.986 14 H 0.151 0.849 15 N -0.072 5.072 16 C -0.201 4.201 17 C -0.204 4.204 18 N -0.134 5.134 19 N -0.061 5.061 20 C -0.188 4.188 21 C -0.074 4.074 22 C -0.174 4.174 23 Br 0.055 6.945 24 C -0.079 4.079 25 H 0.233 0.767 26 H 0.103 0.897 27 H -0.174 1.174 28 H -0.179 1.179 29 H 0.165 0.835 30 H 0.240 0.760 31 H 0.135 0.865 32 H 0.110 0.890 33 H 0.208 0.792 34 H 0.209 0.791 35 H 0.109 0.891 36 H 0.134 0.866 37 H 0.157 0.843 38 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 3.187 5.826 -0.926 6.705 hybrid contribution -1.733 0.688 1.190 2.212 sum 1.454 6.513 0.264 6.679 Atomic orbital electron populations 1.86579 1.17201 1.80273 1.50081 1.24765 0.85010 1.11080 0.97688 0.95162 0.91610 0.74424 0.81188 1.19230 0.98204 0.93970 0.95854 1.21270 0.93992 0.93011 0.95108 1.19874 1.02180 0.94087 0.97356 1.18146 0.79480 0.85993 0.81044 1.90823 1.36968 1.67007 1.45232 1.45802 1.53843 1.12360 1.24711 1.22727 0.95138 0.81966 0.98627 0.85888 1.23970 0.99996 0.96007 0.99420 1.22275 0.97711 0.79892 0.98733 0.84949 1.47153 1.31123 1.07442 1.21450 1.23702 1.01152 1.00844 0.94400 1.23689 1.03585 0.90761 1.02405 1.75175 1.09569 1.24683 1.04020 1.78367 1.20344 0.86123 1.21247 1.23804 0.96516 0.99399 0.99058 1.21250 0.95245 0.92567 0.98350 1.21595 1.03072 0.95609 0.97085 1.96852 1.65595 1.75470 1.56562 1.21163 0.95317 0.99794 0.91628 0.76676 0.89697 1.17394 1.17874 0.83468 0.75985 0.86468 0.89028 0.79228 0.79113 0.89075 0.86610 0.84348 0.83968 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.13 12.74 -35.23 -0.45 -0.32 16 2 C -0.08 0.12 2.81 36.00 0.10 0.22 16 3 Si 0.68 -1.52 29.78 -169.99 -5.06 -6.59 16 4 C -0.07 0.04 5.42 -104.68 -0.57 -0.53 16 5 C -0.01 -0.01 9.15 -39.18 -0.36 -0.36 16 6 C -0.13 0.07 5.87 -104.97 -0.62 -0.55 16 7 C 0.57 0.10 7.77 -12.33 -0.10 0.00 16 8 O -0.52 -1.97 15.95 5.32 0.08 -1.88 16 9 N -0.72 2.24 5.31 -53.96 -0.29 1.95 16 10 C 0.12 -0.38 3.82 -67.11 -0.26 -0.63 16 11 H 0.12 -0.14 6.29 -51.93 -0.33 -0.47 16 12 C -0.15 0.65 7.13 -25.92 -0.18 0.46 16 13 C 0.12 -0.35 5.11 -67.12 -0.34 -0.69 16 14 H 0.13 -0.54 8.14 -51.93 -0.42 -0.96 16 15 N -0.28 -0.20 3.52 -53.97 -0.19 -0.39 16 16 C -0.05 0.00 9.68 -17.04 -0.17 -0.17 16 17 C -0.05 -0.09 12.05 -17.73 -0.21 -0.30 16 18 N -0.27 -1.42 12.41 30.24 0.38 -1.04 16 19 N -0.08 -0.36 13.17 60.35 0.79 0.44 16 20 C -0.15 0.62 7.63 -25.92 -0.20 0.42 16 21 C -0.05 0.12 9.28 -39.16 -0.36 -0.25 16 22 C -0.09 0.12 6.22 -39.58 -0.25 -0.12 16 23 Br -0.03 0.04 33.69 -68.01 -2.29 -2.25 16 24 C -0.06 0.07 8.41 -39.47 -0.33 -0.27 16 25 H 0.38 -1.59 8.74 45.56 0.40 -1.19 16 26 H 0.09 -0.28 7.96 -51.93 -0.41 -0.70 16 27 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 28 H -0.25 0.05 7.11 56.52 0.40 0.45 16 29 H 0.15 0.16 7.65 -52.48 -0.40 -0.24 16 30 H 0.40 -2.34 6.76 -40.82 -0.28 -2.62 16 31 H 0.12 -0.68 8.14 -51.93 -0.42 -1.10 16 32 H 0.09 -0.32 6.99 -51.93 -0.36 -0.68 16 33 H 0.19 -0.50 6.73 -52.49 -0.35 -0.85 16 34 H 0.19 -0.21 8.06 -52.48 -0.42 -0.63 16 35 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 36 H 0.12 -0.76 8.12 -51.93 -0.42 -1.18 16 37 H 0.14 -0.68 6.40 -52.49 -0.34 -1.02 16 38 H 0.14 -0.35 4.86 -52.49 -0.26 -0.61 16 LS Contribution 344.12 15.07 5.19 5.19 Total: 0.00 -10.59 344.12 -9.31 -19.91 By element: Atomic # 1 Polarization: -8.61 SS G_CDS: -3.64 Total: -12.24 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: -3.84 Total: -2.77 kcal Atomic # 7 Polarization: 0.26 SS G_CDS: 0.69 Total: 0.96 kcal Atomic # 8 Polarization: -1.84 SS G_CDS: -0.36 Total: -2.20 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.06 Total: -6.59 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -2.29 Total: -2.25 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -10.59 -9.31 -19.91 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_12335870.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.024 kcal (2) G-P(sol) polarization free energy of solvation -10.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 118.430 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.314 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.908 kcal (6) G-S(sol) free energy of system = (1) + (5) 109.116 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds