Wall clock time and date at job start Sun Mar 7 2021 09:43:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86295 * 109.47138 * 2 1 4 4 C 1.50702 * 109.47389 * 120.00042 * 2 1 3 5 5 C 1.38187 * 119.84228 * 255.02359 * 4 2 1 6 6 C 1.38313 * 120.14424 * 179.73917 * 5 4 2 7 7 F 1.35105 * 120.08372 * 180.27811 * 6 5 4 8 8 C 1.39801 * 119.83254 * 0.48983 * 6 5 4 9 9 C 1.47696 * 120.15859 * 179.76053 * 8 6 5 10 10 O 1.21573 * 119.99897 * 359.73284 * 9 8 6 11 11 N 1.34770 * 120.00372 * 179.72468 * 9 8 6 12 12 C 1.46502 * 120.00208 * 180.02562 * 11 9 8 13 13 H 1.08998 * 112.84650 * 336.19782 * 12 11 9 14 14 C 1.54053 * 113.69678 * 107.46579 * 12 11 9 15 15 C 1.53781 * 86.98569 * 139.99017 * 14 12 11 16 16 H 1.08997 * 113.62142 * 219.98352 * 15 14 12 17 17 N 1.46504 * 113.61301 * 89.16113 * 15 14 12 18 18 C 1.35307 * 125.86774 * 345.86601 * 17 15 14 19 19 C 1.35350 * 106.17738 * 180.02562 * 18 17 15 20 20 N 1.33771 * 106.49501 * 359.97438 * 19 18 17 21 21 N 1.28634 * 108.88748 * 0.02562 * 20 19 18 22 22 C 1.53776 * 113.61554 * 205.00235 * 12 11 9 23 23 C 1.39658 * 119.68866 * 359.49032 * 8 6 5 24 24 C 1.38074 * 119.85217 * 0.27766 * 23 8 6 25 25 F 1.35101 * 119.91418 * 179.97438 * 24 23 8 26 26 H 0.96693 * 114.00528 * 60.00385 * 1 2 3 27 27 H 1.09003 * 109.47152 * 240.00042 * 2 1 3 28 28 H 1.48500 * 110.00170 * 60.00044 * 3 2 1 29 29 H 1.48507 * 110.00216 * 181.31998 * 3 2 1 30 30 H 1.08002 * 119.92298 * 359.97438 * 5 4 2 31 31 H 0.97000 * 120.00365 * 0.02562 * 11 9 8 32 32 H 1.09001 * 113.61187 * 25.48841 * 14 12 11 33 33 H 1.08994 * 113.70045 * 254.50764 * 14 12 11 34 34 H 1.08003 * 126.91448 * 359.97115 * 18 17 15 35 35 H 1.08000 * 126.75531 * 179.97438 * 19 18 17 36 36 H 1.09001 * 113.61826 * 105.38135 * 22 12 11 37 37 H 1.08999 * 113.61793 * 334.48325 * 22 12 11 38 38 H 1.07997 * 120.07313 * 180.24914 * 23 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.4526 0.0198 2.2814 6 6 2.9105 -0.6254 3.4159 7 9 3.4148 0.0902 4.4450 8 6 2.8544 -2.0201 3.4932 9 6 3.3462 -2.7169 4.6990 10 8 3.8058 -2.0776 5.6254 11 7 3.2855 -4.0612 4.7725 12 6 3.7729 -4.7522 5.9689 13 1 4.5073 -4.1693 6.5246 14 6 2.6498 -5.3312 6.8501 15 6 3.5524 -6.5598 7.0519 16 1 3.0118 -7.5062 7.0368 17 7 4.4586 -6.4405 8.1969 18 6 4.7409 -5.3007 8.8691 19 6 5.6161 -5.6440 9.8428 20 7 5.8232 -6.9599 9.7206 21 7 5.1232 -7.4020 8.7361 22 6 4.2085 -6.2036 5.7074 23 6 2.3258 -2.7513 2.4271 24 6 1.8679 -2.0936 1.3028 25 9 1.3567 -2.7996 0.2706 26 1 -0.3934 0.4416 -0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 1.2085 29 1 3.5346 1.7703 -0.0321 30 1 2.4990 1.0970 2.2183 31 1 2.9191 -4.5713 4.0333 32 1 1.7329 -5.5484 6.3021 33 1 2.4735 -4.7641 7.7640 34 1 4.3477 -4.3150 8.6685 35 1 6.0599 -4.9852 10.5745 36 1 5.2899 -6.3403 5.6994 37 1 3.7171 -6.6589 4.8476 38 1 2.2757 -3.8287 2.4819 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_12360598.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:43:59 Heat of formation + Delta-G solvation = 23.044421 kcal Electronic energy + Delta-G solvation = -28380.508753 eV Core-core repulsion = 23864.989116 eV Total energy + Delta-G solvation = -4515.519636 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.102 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -50.21107 -50.12233 -44.31736 -41.72963 -40.54307 -39.49087 -37.78306 -35.53018 -33.94711 -32.96568 -31.96167 -31.55414 -28.32714 -27.41185 -26.67534 -24.61321 -24.08873 -23.57232 -23.03278 -22.03536 -21.26651 -19.75713 -19.00507 -18.77503 -18.53014 -18.37305 -17.71554 -17.62352 -17.22145 -17.02341 -16.58890 -16.36003 -16.27279 -16.01607 -15.75162 -15.65826 -15.52766 -15.48364 -14.84170 -14.63137 -14.07018 -14.05172 -14.02238 -13.91036 -13.76418 -13.67362 -13.17014 -12.69666 -12.59491 -12.46445 -12.18900 -12.16735 -11.82462 -11.31273 -11.04738 -10.78683 -10.63019 -10.48512 -10.32679 -9.95237 -5.21821 -0.97421 -0.48269 0.59135 0.95991 1.18906 1.21769 1.43476 1.59542 1.68191 1.70506 2.06533 2.57734 2.62251 2.66865 2.85894 2.87182 3.09120 3.16140 3.25189 3.43869 3.48652 3.53807 3.57286 3.85135 3.92168 3.99526 4.09084 4.09984 4.14447 4.15825 4.28394 4.33070 4.34936 4.42815 4.50322 4.54497 4.58125 4.73983 4.99686 5.20929 5.22715 5.59108 6.00992 6.33754 6.77503 7.57255 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.079 4.079 3 Si 0.693 3.307 4 C -0.051 4.051 5 C -0.139 4.139 6 C 0.162 3.838 7 F -0.104 7.104 8 C -0.144 4.144 9 C 0.564 3.436 10 O -0.510 6.510 11 N -0.713 5.713 12 C 0.120 3.880 13 H 0.124 0.876 14 C -0.154 4.154 15 C 0.118 3.882 16 H 0.133 0.867 17 N -0.278 5.278 18 C -0.051 4.051 19 C -0.047 4.047 20 N -0.268 5.268 21 N -0.081 5.081 22 C -0.148 4.148 23 C -0.092 4.092 24 C 0.113 3.887 25 F -0.119 7.119 26 H 0.389 0.611 27 H 0.085 0.915 28 H -0.244 1.244 29 H -0.248 1.248 30 H 0.153 0.847 31 H 0.404 0.596 32 H 0.117 0.883 33 H 0.092 0.908 34 H 0.191 0.809 35 H 0.192 0.808 36 H 0.091 0.909 37 H 0.116 0.884 38 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.419 2.282 -8.293 9.670 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.190 4.190 3 Si 0.593 3.407 4 C -0.053 4.053 5 C -0.158 4.158 6 C 0.141 3.859 7 F -0.081 7.081 8 C -0.148 4.148 9 C 0.351 3.649 10 O -0.385 6.385 11 N -0.365 5.365 12 C 0.015 3.985 13 H 0.142 0.858 14 C -0.194 4.194 15 C 0.014 3.986 16 H 0.151 0.849 17 N -0.072 5.072 18 C -0.201 4.201 19 C -0.204 4.204 20 N -0.134 5.134 21 N -0.061 5.061 22 C -0.188 4.188 23 C -0.111 4.111 24 C 0.093 3.907 25 F -0.097 7.097 26 H 0.238 0.762 27 H 0.103 0.897 28 H -0.169 1.169 29 H -0.172 1.172 30 H 0.170 0.830 31 H 0.240 0.760 32 H 0.136 0.864 33 H 0.110 0.890 34 H 0.208 0.792 35 H 0.209 0.791 36 H 0.110 0.890 37 H 0.134 0.866 38 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -3.176 1.511 -6.671 7.541 hybrid contribution -0.534 0.371 -0.322 0.726 sum -3.711 1.881 -6.993 8.137 Atomic orbital electron populations 1.86482 1.16102 1.82083 1.50042 1.24676 0.86761 1.11270 0.96246 0.94742 0.81287 0.77164 0.87501 1.19444 0.98210 0.92017 0.95608 1.20922 1.01561 1.01240 0.92060 1.17432 0.95188 0.88024 0.85224 1.91659 1.83530 1.77141 1.55816 1.19798 1.06089 0.92369 0.96542 1.17840 0.78625 0.82343 0.86110 1.90897 1.43901 1.65708 1.37988 1.45751 1.64344 1.06191 1.20230 1.22818 0.96698 0.92284 0.86700 0.85798 1.24021 0.98700 0.94599 1.02059 1.22266 0.90569 1.02551 0.83177 0.84878 1.47152 1.30765 1.06330 1.22974 1.23707 1.04407 0.94088 0.97917 1.23692 1.01388 0.93480 1.01830 1.75174 1.17262 1.10259 1.10716 1.78369 1.06486 1.14667 1.06545 1.23806 1.03528 0.94900 0.96519 1.21156 0.97628 1.01077 0.91259 1.17169 0.98794 0.88694 0.86030 1.91580 1.84274 1.77917 1.55945 0.76230 0.89714 1.16907 1.17233 0.83024 0.75964 0.86431 0.88953 0.79218 0.79090 0.89032 0.86588 0.82857 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.84 12.86 -35.23 -0.45 0.39 16 2 C -0.08 0.15 2.43 36.01 0.09 0.24 16 3 Si 0.69 -2.07 30.18 -169.99 -5.13 -7.20 16 4 C -0.05 0.00 5.30 -104.49 -0.55 -0.56 16 5 C -0.14 -0.10 8.62 -39.57 -0.34 -0.44 16 6 C 0.16 0.29 7.28 -38.97 -0.28 0.01 16 7 F -0.10 -0.42 15.55 2.25 0.04 -0.39 16 8 C -0.14 -0.02 5.88 -104.92 -0.62 -0.64 16 9 C 0.56 0.40 7.77 -12.40 -0.10 0.30 16 10 O -0.51 -2.33 14.94 5.30 0.08 -2.25 16 11 N -0.71 2.17 5.31 -53.87 -0.29 1.89 16 12 C 0.12 -0.36 3.81 -66.98 -0.26 -0.62 16 13 H 0.12 -0.13 6.19 -51.93 -0.32 -0.45 16 14 C -0.15 0.65 7.15 -25.78 -0.18 0.46 16 15 C 0.12 -0.35 5.10 -67.11 -0.34 -0.69 16 16 H 0.13 -0.54 8.14 -51.93 -0.42 -0.97 16 17 N -0.28 -0.22 3.52 -53.97 -0.19 -0.41 16 18 C -0.05 -0.01 9.67 -17.05 -0.16 -0.18 16 19 C -0.05 -0.09 12.05 -17.74 -0.21 -0.31 16 20 N -0.27 -1.45 12.41 30.23 0.38 -1.07 16 21 N -0.08 -0.36 13.17 60.35 0.79 0.43 16 22 C -0.15 0.62 7.63 -25.92 -0.20 0.42 16 23 C -0.09 0.19 9.52 -39.11 -0.37 -0.19 16 24 C 0.11 -0.04 7.23 -39.49 -0.29 -0.33 16 25 F -0.12 -0.03 16.73 2.25 0.04 0.01 16 26 H 0.39 -2.55 8.74 45.56 0.40 -2.16 16 27 H 0.08 -0.28 7.89 -51.93 -0.41 -0.69 16 28 H -0.24 0.06 6.74 56.52 0.38 0.44 16 29 H -0.25 0.12 7.11 56.52 0.40 0.53 16 30 H 0.15 0.01 4.87 -52.49 -0.26 -0.24 16 31 H 0.40 -2.44 6.76 -40.82 -0.28 -2.72 16 32 H 0.12 -0.69 8.14 -51.93 -0.42 -1.12 16 33 H 0.09 -0.31 7.06 -51.93 -0.37 -0.68 16 34 H 0.19 -0.46 6.70 -52.48 -0.35 -0.81 16 35 H 0.19 -0.17 8.06 -52.49 -0.42 -0.60 16 36 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.12 -0.78 8.12 -51.93 -0.42 -1.20 16 38 H 0.15 -0.86 6.40 -52.49 -0.34 -1.19 16 LS Contribution 333.18 15.07 5.02 5.02 Total: 0.00 -11.81 333.18 -6.79 -18.60 By element: Atomic # 1 Polarization: -9.26 SS G_CDS: -3.25 Total: -12.50 kcal Atomic # 6 Polarization: 1.31 SS G_CDS: -3.82 Total: -2.51 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: 0.69 Total: 0.83 kcal Atomic # 8 Polarization: -1.49 SS G_CDS: -0.37 Total: -1.86 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.07 Total: -0.38 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: -5.13 Total: -7.20 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -11.81 -6.79 -18.60 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_12360598.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.644 kcal (2) G-P(sol) polarization free energy of solvation -11.812 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.832 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.788 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.600 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.044 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds