Wall clock time and date at job start Sun Mar 7 2021 09:43:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86295 * 109.47138 * 2 1 4 4 C 1.50702 * 109.47389 * 120.00042 * 2 1 3 5 5 C 1.38187 * 119.84228 * 255.02359 * 4 2 1 6 6 C 1.38313 * 120.14424 * 179.73917 * 5 4 2 7 7 F 1.35105 * 120.08372 * 180.27811 * 6 5 4 8 8 C 1.39801 * 119.83254 * 0.48983 * 6 5 4 9 9 C 1.47696 * 120.15859 * 179.76053 * 8 6 5 10 10 O 1.21573 * 119.99897 * 359.73284 * 9 8 6 11 11 N 1.34770 * 120.00372 * 179.72468 * 9 8 6 12 12 C 1.46502 * 120.00208 * 180.02562 * 11 9 8 13 13 H 1.08998 * 112.84650 * 336.19782 * 12 11 9 14 14 C 1.54053 * 113.69678 * 107.46579 * 12 11 9 15 15 C 1.53781 * 86.98569 * 139.99017 * 14 12 11 16 16 H 1.08997 * 113.62142 * 219.98352 * 15 14 12 17 17 N 1.46504 * 113.61301 * 89.16113 * 15 14 12 18 18 C 1.35307 * 125.86774 * 345.86601 * 17 15 14 19 19 C 1.35350 * 106.17738 * 180.02562 * 18 17 15 20 20 N 1.33771 * 106.49501 * 359.97438 * 19 18 17 21 21 N 1.28634 * 108.88748 * 0.02562 * 20 19 18 22 22 C 1.53776 * 113.61554 * 205.00235 * 12 11 9 23 23 C 1.39658 * 119.68866 * 359.49032 * 8 6 5 24 24 C 1.38074 * 119.85217 * 0.27766 * 23 8 6 25 25 F 1.35101 * 119.91418 * 179.97438 * 24 23 8 26 26 H 0.96693 * 114.00528 * 60.00385 * 1 2 3 27 27 H 1.09003 * 109.47152 * 240.00042 * 2 1 3 28 28 H 1.48500 * 110.00170 * 60.00044 * 3 2 1 29 29 H 1.48507 * 110.00216 * 181.31998 * 3 2 1 30 30 H 1.08002 * 119.92298 * 359.97438 * 5 4 2 31 31 H 0.97000 * 120.00365 * 0.02562 * 11 9 8 32 32 H 1.09001 * 113.61187 * 25.48841 * 14 12 11 33 33 H 1.08994 * 113.70045 * 254.50764 * 14 12 11 34 34 H 1.08003 * 126.91448 * 359.97115 * 18 17 15 35 35 H 1.08000 * 126.75531 * 179.97438 * 19 18 17 36 36 H 1.09001 * 113.61826 * 105.38135 * 22 12 11 37 37 H 1.08999 * 113.61793 * 334.48325 * 22 12 11 38 38 H 1.07997 * 120.07313 * 180.24914 * 23 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.4526 0.0198 2.2814 6 6 2.9105 -0.6254 3.4159 7 9 3.4148 0.0902 4.4450 8 6 2.8544 -2.0201 3.4932 9 6 3.3462 -2.7169 4.6990 10 8 3.8058 -2.0776 5.6254 11 7 3.2855 -4.0612 4.7725 12 6 3.7729 -4.7522 5.9689 13 1 4.5073 -4.1693 6.5246 14 6 2.6498 -5.3312 6.8501 15 6 3.5524 -6.5598 7.0519 16 1 3.0118 -7.5062 7.0368 17 7 4.4586 -6.4405 8.1969 18 6 4.7409 -5.3007 8.8691 19 6 5.6161 -5.6440 9.8428 20 7 5.8232 -6.9599 9.7206 21 7 5.1232 -7.4020 8.7361 22 6 4.2085 -6.2036 5.7074 23 6 2.3258 -2.7513 2.4271 24 6 1.8679 -2.0936 1.3028 25 9 1.3567 -2.7996 0.2706 26 1 -0.3934 0.4416 -0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 1.2085 29 1 3.5346 1.7703 -0.0321 30 1 2.4990 1.0970 2.2183 31 1 2.9191 -4.5713 4.0333 32 1 1.7329 -5.5484 6.3021 33 1 2.4735 -4.7641 7.7640 34 1 4.3477 -4.3150 8.6685 35 1 6.0599 -4.9852 10.5745 36 1 5.2899 -6.3403 5.6994 37 1 3.7171 -6.6589 4.8476 38 1 2.2757 -3.8287 2.4819 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567748_12360598.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:43:58 Heat of formation + Delta-G solvation = 18.550367 kcal Electronic energy + Delta-G solvation = -28380.703629 eV Core-core repulsion = 23864.989116 eV Total energy + Delta-G solvation = -4515.714513 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.102 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -50.28555 -50.17403 -44.39806 -41.67176 -40.43182 -39.44777 -37.63090 -35.51732 -33.94907 -32.91889 -32.05786 -31.53051 -28.23942 -27.09905 -26.57684 -24.55431 -24.06267 -23.66267 -23.00409 -21.99696 -21.18700 -19.70092 -18.95289 -18.60853 -18.54855 -18.26841 -17.64331 -17.56161 -17.26963 -17.02856 -16.60457 -16.29380 -16.23818 -16.04458 -15.77758 -15.62627 -15.46340 -15.36782 -14.79175 -14.57758 -13.98642 -13.92413 -13.86889 -13.69136 -13.63725 -13.57636 -13.16752 -12.80687 -12.46135 -12.36633 -12.13023 -12.05480 -11.83300 -11.36852 -11.07178 -10.75418 -10.44206 -10.43918 -10.34230 -9.95445 -5.01874 -0.94574 -0.46414 0.52298 1.15611 1.23605 1.29380 1.51619 1.60051 1.70969 1.87826 2.09240 2.62745 2.71651 2.86440 2.94110 3.12854 3.18235 3.34509 3.43613 3.55072 3.58724 3.73242 3.77614 3.99432 4.06554 4.17119 4.20113 4.21615 4.24309 4.31563 4.41534 4.51060 4.53071 4.62064 4.62347 4.70464 4.77131 4.83033 5.15194 5.19423 5.24966 5.62622 6.19931 6.80067 6.87580 7.42226 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.085 4.085 3 Si 0.778 3.222 4 C -0.062 4.062 5 C -0.149 4.149 6 C 0.137 3.863 7 F -0.125 7.125 8 C -0.147 4.147 9 C 0.563 3.437 10 O -0.557 6.557 11 N -0.690 5.690 12 C 0.112 3.888 13 H 0.101 0.899 14 C -0.140 4.140 15 C 0.103 3.897 16 H 0.149 0.851 17 N -0.270 5.270 18 C -0.041 4.041 19 C -0.063 4.063 20 N -0.313 5.313 21 N -0.116 5.116 22 C -0.133 4.133 23 C -0.070 4.070 24 C 0.107 3.893 25 F -0.119 7.119 26 H 0.410 0.590 27 H 0.104 0.896 28 H -0.287 1.287 29 H -0.284 1.284 30 H 0.149 0.851 31 H 0.422 0.578 32 H 0.145 0.855 33 H 0.085 0.915 34 H 0.215 0.785 35 H 0.212 0.788 36 H 0.073 0.927 37 H 0.152 0.848 38 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.003 1.178 -10.242 11.929 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.195 4.195 3 Si 0.683 3.317 4 C -0.064 4.064 5 C -0.168 4.168 6 C 0.116 3.884 7 F -0.103 7.103 8 C -0.151 4.151 9 C 0.350 3.650 10 O -0.436 6.436 11 N -0.343 5.343 12 C 0.007 3.993 13 H 0.119 0.881 14 C -0.179 4.179 15 C 0.002 3.998 16 H 0.167 0.833 17 N -0.064 5.064 18 C -0.192 4.192 19 C -0.220 4.220 20 N -0.178 5.178 21 N -0.094 5.094 22 C -0.172 4.172 23 C -0.089 4.089 24 C 0.088 3.912 25 F -0.098 7.098 26 H 0.262 0.738 27 H 0.122 0.878 28 H -0.215 1.215 29 H -0.211 1.211 30 H 0.166 0.834 31 H 0.262 0.738 32 H 0.163 0.837 33 H 0.104 0.896 34 H 0.231 0.769 35 H 0.228 0.772 36 H 0.092 0.908 37 H 0.170 0.830 38 H 0.212 0.788 Dipole moment (debyes) X Y Z Total from point charges -4.797 0.343 -8.685 9.928 hybrid contribution -0.077 0.754 0.243 0.796 sum -4.874 1.097 -8.442 9.809 Atomic orbital electron populations 1.86431 1.16041 1.82633 1.51740 1.24795 0.86945 1.11686 0.96047 0.93873 0.77839 0.74969 0.85025 1.19755 0.97878 0.92748 0.96002 1.20935 1.02252 1.01269 0.92309 1.17785 0.96389 0.89005 0.85220 1.91596 1.84132 1.77773 1.56847 1.19823 1.06477 0.91710 0.97128 1.17959 0.78164 0.83288 0.85618 1.90878 1.46243 1.66905 1.39569 1.45583 1.63024 1.04944 1.20756 1.22828 0.97110 0.92538 0.86827 0.88145 1.24030 0.98975 0.93262 1.01666 1.22678 0.90625 1.03969 0.82553 0.83310 1.47473 1.30055 1.05768 1.23147 1.24077 1.03383 0.94806 0.96934 1.24179 1.02040 0.92873 1.02943 1.75101 1.18752 1.12027 1.11924 1.78260 1.07878 1.15959 1.07349 1.23826 1.02711 0.93723 0.96956 1.21467 0.95135 1.02788 0.89466 1.17281 0.98947 0.88570 0.86442 1.91581 1.84318 1.77818 1.56046 0.73801 0.87799 1.21497 1.21108 0.83421 0.73840 0.83683 0.89638 0.76885 0.77173 0.90799 0.83034 0.78815 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.33 12.86 -148.98 -1.92 0.41 16 2 C -0.09 0.39 2.43 71.24 0.17 0.56 16 3 Si 0.78 -4.26 30.18 68.60 2.07 -2.19 16 4 C -0.06 0.00 5.30 -19.78 -0.10 -0.11 16 5 C -0.15 -0.41 8.62 22.28 0.19 -0.22 16 6 C 0.14 0.70 7.28 22.67 0.17 0.87 16 7 F -0.13 -1.37 15.55 44.97 0.70 -0.67 16 8 C -0.15 -0.02 5.88 -20.06 -0.12 -0.14 16 9 C 0.56 0.74 7.77 86.74 0.67 1.41 16 10 O -0.56 -5.89 14.94 -3.95 -0.06 -5.95 16 11 N -0.69 5.43 5.31 -442.62 -2.35 3.08 16 12 C 0.11 -0.81 3.81 45.61 0.17 -0.64 16 13 H 0.10 -0.17 6.19 -2.39 -0.01 -0.19 16 14 C -0.14 1.44 7.15 31.21 0.22 1.66 16 15 C 0.10 -0.75 5.10 45.52 0.23 -0.52 16 16 H 0.15 -1.51 8.14 -2.39 -0.02 -1.53 16 17 N -0.27 -0.49 3.52 -324.66 -1.14 -1.63 16 18 C -0.04 -0.04 9.67 83.49 0.81 0.77 16 19 C -0.06 -0.32 12.05 83.73 1.01 0.69 16 20 N -0.31 -3.91 12.41 -58.26 -0.72 -4.63 16 21 N -0.12 -1.17 13.17 37.02 0.49 -0.68 16 22 C -0.13 1.36 7.63 31.12 0.24 1.60 16 23 C -0.07 0.41 9.52 22.57 0.21 0.63 16 24 C 0.11 -0.23 7.23 22.33 0.16 -0.07 16 25 F -0.12 0.19 16.73 44.97 0.75 0.94 16 26 H 0.41 -5.96 8.74 -74.06 -0.65 -6.61 16 27 H 0.10 -0.86 7.89 -2.39 -0.02 -0.88 16 28 H -0.29 -0.42 6.74 99.48 0.67 0.25 16 29 H -0.28 -0.10 7.11 99.48 0.71 0.61 16 30 H 0.15 0.37 4.87 -2.91 -0.01 0.36 16 31 H 0.42 -6.55 6.76 -92.71 -0.63 -7.18 16 32 H 0.15 -2.24 8.14 -2.39 -0.02 -2.26 16 33 H 0.09 -0.68 7.06 -2.39 -0.02 -0.70 16 34 H 0.21 -1.02 6.70 -2.91 -0.02 -1.04 16 35 H 0.21 -0.19 8.06 -2.91 -0.02 -0.21 16 36 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 37 H 0.15 -2.62 8.12 -2.39 -0.02 -2.64 16 38 H 0.19 -2.93 6.40 -2.91 -0.02 -2.95 16 Total: 0.00 -31.97 333.18 1.76 -30.21 By element: Atomic # 1 Polarization: -25.29 SS G_CDS: -0.10 Total: -25.39 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: 4.04 Total: 6.50 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -3.73 Total: -3.86 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -1.97 Total: -5.54 kcal Atomic # 9 Polarization: -1.18 SS G_CDS: 1.45 Total: 0.27 kcal Atomic # 14 Polarization: -4.26 SS G_CDS: 2.07 Total: -2.19 kcal Total: -31.97 1.76 -30.21 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_12360598.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.758 kcal (2) G-P(sol) polarization free energy of solvation -31.967 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.208 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds