Wall clock time and date at job start Sun Mar 7 2021 09:44:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47511 * 2 1 4 4 C 1.50699 * 109.46971 * 120.00474 * 2 1 3 5 5 C 1.35088 * 126.07284 * 255.13592 * 4 2 1 6 6 N 1.35039 * 107.97784 * 180.27994 * 5 4 2 7 7 C 1.46496 * 125.93009 * 179.74977 * 6 5 4 8 8 C 1.50702 * 109.47260 * 125.02291 * 7 6 5 9 9 O 1.21287 * 119.99968 * 0.02562 * 8 7 6 10 10 N 1.34774 * 120.00279 * 179.97438 * 8 7 6 11 11 C 1.46501 * 120.00204 * 179.97438 * 10 8 7 12 12 H 1.09003 * 112.84545 * 23.80509 * 11 10 8 13 13 C 1.53781 * 113.61400 * 154.99858 * 11 10 8 14 14 C 1.53779 * 87.08232 * 139.98233 * 13 11 10 15 15 H 1.08994 * 113.61616 * 220.01842 * 14 13 11 16 16 N 1.46502 * 113.61419 * 89.11314 * 14 13 11 17 17 C 1.35313 * 125.87177 * 275.00592 * 16 14 13 18 18 C 1.35347 * 106.17518 * 180.02562 * 17 16 14 19 19 N 1.33769 * 106.49813 * 359.97438 * 18 17 16 20 20 N 1.28635 * 108.88443 * 359.73919 * 19 18 17 21 21 C 1.53774 * 113.61603 * 252.49745 * 11 10 8 22 22 N 1.40071 * 108.14089 * 359.74508 * 6 5 4 23 23 C 1.31631 * 108.10775 * 0.02562 * 22 6 5 24 24 C 1.48414 * 126.03983 * 179.97438 * 23 22 6 25 25 C 1.39317 * 120.12177 * 145.29867 * 24 23 22 26 26 C 1.38021 * 119.88270 * 180.23465 * 25 24 23 27 27 C 1.38322 * 120.11602 * 359.46521 * 26 25 24 28 28 C 1.38317 * 120.24054 * 0.30341 * 27 26 25 29 29 C 1.38020 * 120.12095 * 359.95566 * 28 27 26 30 30 H 0.96706 * 113.99711 * 300.00411 * 1 2 3 31 31 H 1.08999 * 109.46789 * 240.00001 * 2 1 3 32 32 H 1.48498 * 110.00170 * 300.00184 * 3 2 1 33 33 H 1.48503 * 110.00014 * 61.31999 * 3 2 1 34 34 H 1.08003 * 126.01054 * 0.02562 * 5 4 2 35 35 H 1.08999 * 109.46932 * 245.02156 * 7 6 5 36 36 H 1.09002 * 109.47253 * 5.02198 * 7 6 5 37 37 H 0.97003 * 119.99731 * 359.97438 * 10 8 7 38 38 H 1.09002 * 113.61509 * 254.53528 * 13 11 10 39 39 H 1.09003 * 113.61451 * 25.35169 * 13 11 10 40 40 H 1.07997 * 126.91082 * 0.02562 * 17 16 14 41 41 H 1.08003 * 126.74663 * 179.97438 * 18 17 16 42 42 H 1.09004 * 113.61406 * 334.56802 * 21 11 10 43 43 H 1.09002 * 113.61319 * 105.47058 * 21 11 10 44 44 H 1.08004 * 120.06224 * 359.97438 * 25 24 23 45 45 H 1.08002 * 119.94618 * 179.75015 * 26 25 24 46 46 H 1.07998 * 119.87742 * 180.27742 * 27 26 25 47 47 H 1.07997 * 119.93938 * 179.97438 * 28 27 26 48 48 H 1.08004 * 120.05800 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7105 1.2304 5 6 2.4604 -0.1249 2.3267 6 7 2.7925 -1.0995 3.2005 7 6 3.4026 -0.9018 4.5177 8 6 2.5555 -1.5711 5.5692 9 8 1.5422 -2.1561 5.2497 10 7 2.9244 -1.5205 6.8645 11 6 2.1006 -2.1706 7.8867 12 1 1.4857 -2.9762 7.4854 13 6 2.8838 -2.5643 9.1502 14 6 1.6598 -2.1013 9.9579 15 1 1.9168 -1.5617 10.8694 16 7 0.6698 -3.1580 10.1807 17 6 -0.3173 -3.5127 9.3258 18 6 -0.9910 -4.5217 9.9256 19 7 -0.3907 -4.7327 11.1023 20 7 0.5932 -3.9125 11.2207 21 6 1.3233 -1.1821 8.7718 22 7 2.4524 -2.3322 2.6289 23 6 1.9303 -2.1029 1.4426 24 6 1.4335 -3.1304 0.4938 25 6 0.3309 -2.8611 -0.3141 26 6 -0.1300 -3.8220 -1.1912 27 6 0.5077 -5.0465 -1.2769 28 6 1.6057 -5.3174 -0.4806 29 6 2.0716 -4.3656 0.4038 30 1 -0.3933 0.4418 0.7651 31 1 1.7922 -0.5138 -0.8900 32 1 1.5616 2.4679 -1.2084 33 1 1.5880 2.4585 1.2243 34 1 2.5979 0.9358 2.4762 35 1 4.4016 -1.3376 4.5245 36 1 3.4701 0.1651 4.7304 37 1 3.7354 -1.0535 7.1199 38 1 3.0788 -3.6340 9.2275 39 1 3.7742 -1.9586 9.3185 40 1 -0.5257 -3.0780 8.3594 41 1 -1.8453 -5.0522 9.5317 42 1 1.7863 -0.1975 8.8374 43 1 0.2585 -1.1359 8.5436 44 1 -0.1650 -1.9037 -0.2512 45 1 -0.9871 -3.6158 -1.8151 46 1 0.1465 -5.7939 -1.9678 47 1 2.0996 -6.2752 -0.5512 48 1 2.9293 -4.5781 1.0248 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_12622748.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:44:08 Heat of formation + Delta-G solvation = 192.425149 kcal Electronic energy + Delta-G solvation = -34008.199407 eV Core-core repulsion = 29456.789521 eV Total energy + Delta-G solvation = -4551.409886 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.159 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -44.33233 -42.52670 -41.41693 -39.88687 -39.50775 -37.90526 -35.42923 -34.82679 -33.42526 -32.28036 -31.98236 -31.73149 -31.33486 -29.03615 -27.43663 -26.85131 -25.87199 -24.20641 -23.58067 -23.35825 -23.19844 -22.06848 -21.54768 -21.22722 -20.87657 -19.00664 -18.60563 -18.51552 -17.88308 -17.74913 -17.21229 -16.92302 -16.80309 -16.46701 -16.21857 -16.04028 -15.78294 -15.66865 -15.49847 -15.37739 -14.94050 -14.82826 -14.56869 -14.25939 -14.18145 -14.05641 -14.01956 -13.80182 -13.77068 -13.58681 -13.35067 -12.71374 -12.57469 -12.54703 -12.33437 -12.18201 -12.01501 -11.83934 -11.68890 -11.54677 -11.36987 -11.06793 -10.65358 -10.48388 -10.44289 -10.34063 -9.73199 -9.66237 -9.19323 -5.00665 0.23206 0.57604 0.67906 0.74790 1.12025 1.17224 1.22394 1.29284 1.51606 1.66493 1.79412 1.80407 1.95229 2.59600 2.84623 3.05761 3.11453 3.17497 3.34310 3.39861 3.42234 3.55664 3.55851 3.66082 3.72793 3.90288 3.98734 4.05660 4.08454 4.13366 4.20763 4.25188 4.25970 4.32777 4.40276 4.41230 4.47322 4.54822 4.59837 4.72071 4.74179 4.84330 4.91487 5.01020 5.13609 5.21375 5.34252 5.41473 5.57554 5.72006 5.75878 5.80702 5.81427 6.05907 6.22416 6.45095 6.64634 6.83562 7.55773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.036 4.036 3 Si 0.686 3.314 4 C -0.247 4.247 5 C 0.061 3.939 6 N -0.360 5.360 7 C 0.117 3.883 8 C 0.500 3.500 9 O -0.500 6.500 10 N -0.720 5.720 11 C 0.123 3.877 12 H 0.121 0.879 13 C -0.148 4.148 14 C 0.117 3.883 15 H 0.133 0.867 16 N -0.278 5.278 17 C -0.051 4.051 18 C -0.047 4.047 19 N -0.268 5.268 20 N -0.081 5.081 21 C -0.154 4.154 22 N -0.250 5.250 23 C 0.136 3.864 24 C -0.022 4.022 25 C -0.099 4.099 26 C -0.125 4.125 27 C -0.111 4.111 28 C -0.127 4.127 29 C -0.091 4.091 30 H 0.374 0.626 31 H 0.117 0.883 32 H -0.255 1.255 33 H -0.260 1.260 34 H 0.178 0.822 35 H 0.120 0.880 36 H 0.129 0.871 37 H 0.405 0.595 38 H 0.090 0.910 39 H 0.116 0.884 40 H 0.190 0.810 41 H 0.192 0.808 42 H 0.117 0.883 43 H 0.089 0.911 44 H 0.154 0.846 45 H 0.124 0.876 46 H 0.122 0.878 47 H 0.124 0.876 48 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.471 7.494 -1.171 9.970 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.147 4.147 3 Si 0.588 3.412 4 C -0.258 4.258 5 C -0.084 4.084 6 N -0.141 5.141 7 C -0.009 4.009 8 C 0.284 3.716 9 O -0.372 6.372 10 N -0.373 5.373 11 C 0.017 3.983 12 H 0.139 0.861 13 C -0.187 4.187 14 C 0.014 3.986 15 H 0.150 0.850 16 N -0.072 5.072 17 C -0.201 4.201 18 C -0.204 4.204 19 N -0.134 5.134 20 N -0.061 5.061 21 C -0.194 4.194 22 N -0.071 5.071 23 C -0.030 4.030 24 C -0.024 4.024 25 C -0.118 4.118 26 C -0.143 4.143 27 C -0.130 4.130 28 C -0.145 4.145 29 C -0.111 4.111 30 H 0.223 0.777 31 H 0.134 0.866 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.195 0.805 35 H 0.138 0.862 36 H 0.147 0.853 37 H 0.240 0.760 38 H 0.108 0.892 39 H 0.134 0.866 40 H 0.207 0.793 41 H 0.209 0.791 42 H 0.135 0.865 43 H 0.108 0.892 44 H 0.171 0.829 45 H 0.142 0.858 46 H 0.140 0.860 47 H 0.142 0.858 48 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 6.628 6.429 0.440 9.244 hybrid contribution -1.240 0.994 -0.817 1.787 sum 5.388 7.423 -0.376 9.180 Atomic orbital electron populations 1.86498 1.18342 1.79142 1.49462 1.24253 0.83181 1.10108 0.97167 0.95157 0.91412 0.74206 0.80469 1.20384 1.13113 0.93239 0.99091 1.22283 1.00266 0.95365 0.90451 1.47822 1.48635 1.04439 1.13240 1.21495 0.97149 1.03431 0.78815 1.20660 0.86584 0.81088 0.83296 1.90849 1.24847 1.40812 1.80661 1.45812 1.28342 1.57109 1.06031 1.22685 0.93283 0.95943 0.86378 0.86109 1.23799 0.97141 1.04412 0.93382 1.22261 0.88235 0.87041 1.01058 0.84970 1.47145 1.21931 1.25127 1.13028 1.23681 0.93941 1.02262 1.00197 1.23691 1.03731 0.99799 0.93131 1.75175 1.03307 1.17263 1.17621 1.78363 1.16691 1.02454 1.08555 1.23962 1.03353 0.99269 0.92778 1.77801 1.19198 1.01614 1.08452 1.20641 0.97847 0.92365 0.92137 1.17773 0.96799 0.92065 0.95777 1.21898 0.95022 1.00913 0.94002 1.21140 1.00280 0.93641 0.99222 1.21302 0.95683 0.97137 0.98867 1.21083 0.97301 0.99349 0.96739 1.21208 0.99609 0.92365 0.97872 0.77730 0.86564 1.17976 1.18548 0.80501 0.86192 0.85291 0.75961 0.89161 0.86592 0.79337 0.79094 0.86517 0.89206 0.82911 0.85753 0.85979 0.85817 0.85915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.28 10.10 -35.23 -0.36 -0.63 16 2 C -0.04 0.01 2.00 36.01 0.07 0.09 16 3 Si 0.69 -1.46 30.81 -169.99 -5.24 -6.70 16 4 C -0.25 -0.21 5.34 -104.76 -0.56 -0.77 16 5 C 0.06 -0.06 9.96 -17.26 -0.17 -0.23 16 6 N -0.36 -0.10 3.40 -62.58 -0.21 -0.31 16 7 C 0.12 -0.48 6.99 -5.19 -0.04 -0.51 16 8 C 0.50 -0.74 7.86 -10.99 -0.09 -0.82 16 9 O -0.50 -2.00 15.30 5.55 0.08 -1.92 16 10 N -0.72 3.51 5.35 -53.02 -0.28 3.23 16 11 C 0.12 -0.45 3.82 -67.12 -0.26 -0.70 16 12 H 0.12 -0.10 6.30 -51.93 -0.33 -0.43 16 13 C -0.15 0.68 7.63 -25.92 -0.20 0.48 16 14 C 0.12 -0.38 5.11 -67.12 -0.34 -0.73 16 15 H 0.13 -0.58 8.14 -51.93 -0.42 -1.00 16 16 N -0.28 -0.21 3.52 -53.97 -0.19 -0.40 16 17 C -0.05 -0.02 9.68 -17.05 -0.17 -0.18 16 18 C -0.05 -0.10 12.05 -17.74 -0.21 -0.31 16 19 N -0.27 -1.46 12.41 30.23 0.38 -1.08 16 20 N -0.08 -0.36 13.16 60.35 0.79 0.43 16 21 C -0.15 0.74 7.13 -25.92 -0.18 0.55 16 22 N -0.25 -1.03 11.63 33.43 0.39 -0.64 16 23 C 0.14 0.50 6.74 -82.78 -0.56 -0.06 16 24 C -0.02 -0.09 5.80 -104.90 -0.61 -0.70 16 25 C -0.10 -0.33 8.94 -39.26 -0.35 -0.68 16 26 C -0.12 -0.30 10.03 -39.63 -0.40 -0.70 16 27 C -0.11 -0.22 10.04 -39.52 -0.40 -0.62 16 28 C -0.13 -0.29 10.03 -39.63 -0.40 -0.69 16 29 C -0.09 -0.31 9.75 -39.26 -0.38 -0.70 16 30 H 0.37 -0.75 8.70 45.56 0.40 -0.36 16 31 H 0.12 -0.02 7.83 -51.93 -0.41 -0.42 16 32 H -0.26 -0.37 7.11 56.52 0.40 0.04 16 33 H -0.26 0.28 6.99 56.52 0.40 0.68 16 34 H 0.18 -0.81 6.33 -52.48 -0.33 -1.14 16 35 H 0.12 -0.73 8.14 -51.93 -0.42 -1.16 16 36 H 0.13 -1.07 8.07 -51.93 -0.42 -1.49 16 37 H 0.41 -3.42 8.73 -40.82 -0.36 -3.78 16 38 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 39 H 0.12 -0.84 8.12 -51.93 -0.42 -1.26 16 40 H 0.19 -0.41 6.74 -52.49 -0.35 -0.76 16 41 H 0.19 -0.13 8.06 -52.48 -0.42 -0.55 16 42 H 0.12 -0.79 8.14 -51.93 -0.42 -1.22 16 43 H 0.09 -0.33 6.98 -51.93 -0.36 -0.70 16 44 H 0.15 0.45 4.50 -52.48 -0.24 0.22 16 45 H 0.12 0.08 8.06 -52.49 -0.42 -0.34 16 46 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 47 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 48 H 0.12 0.37 8.06 -52.48 -0.42 -0.06 16 LS Contribution 403.84 15.07 6.09 6.09 Total: 0.00 -14.80 403.84 -9.61 -24.42 By element: Atomic # 1 Polarization: -9.36 SS G_CDS: -5.83 Total: -15.19 kcal Atomic # 6 Polarization: -2.05 SS G_CDS: -5.23 Total: -7.29 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: 0.87 Total: 1.22 kcal Atomic # 8 Polarization: -2.28 SS G_CDS: -0.27 Total: -2.55 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.24 Total: -6.70 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -14.80 -9.61 -24.42 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_12622748.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 216.841 kcal (2) G-P(sol) polarization free energy of solvation -14.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 202.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.614 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.416 kcal (6) G-S(sol) free energy of system = (1) + (5) 192.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds