Wall clock time and date at job start Sun Mar 7 2021 09:44:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38977 * 119.95374 * 2 1 4 4 O 1.35718 * 119.91231 * 359.97438 * 3 2 1 5 5 C 1.39008 * 120.17698 * 180.02562 * 3 2 1 6 6 C 1.50709 * 119.95810 * 179.97438 * 5 3 2 7 7 O 1.42900 * 109.46758 * 284.99544 * 6 5 3 8 8 Si 1.86291 * 109.47344 * 164.99485 * 6 5 3 9 9 C 1.37683 * 120.09056 * 359.68840 * 5 3 2 10 10 C 1.39755 * 119.90569 * 0.53717 * 9 5 3 11 11 C 1.47607 * 120.08452 * 179.76197 * 10 9 5 12 12 O 1.21583 * 120.00146 * 359.72632 * 11 10 9 13 13 N 1.34777 * 119.99527 * 179.97438 * 11 10 9 14 14 C 1.46505 * 119.99724 * 179.72722 * 13 11 10 15 15 H 1.08994 * 112.85146 * 23.80616 * 14 13 11 16 16 C 1.53783 * 113.61417 * 155.00390 * 14 13 11 17 17 C 1.53782 * 87.07834 * 139.97969 * 16 14 13 18 18 H 1.09009 * 113.60763 * 220.01327 * 17 16 14 19 19 N 1.46493 * 113.61313 * 89.11978 * 17 16 14 20 20 C 1.35317 * 125.86685 * 274.99144 * 19 17 16 21 21 C 1.35348 * 106.17556 * 180.02562 * 20 19 17 22 22 N 1.33770 * 106.49999 * 0.02562 * 21 20 19 23 23 N 1.28638 * 108.88110 * 359.73881 * 22 21 20 24 24 C 1.53771 * 87.08417 * 334.56421 * 17 16 14 25 25 C 1.37715 * 119.95877 * 179.97438 * 2 1 3 26 26 H 1.09001 * 109.47379 * 270.02536 * 1 2 3 27 27 H 1.08999 * 109.47097 * 30.02776 * 1 2 3 28 28 H 1.09000 * 109.46794 * 150.02853 * 1 2 3 29 29 H 0.96700 * 113.99573 * 90.00338 * 4 3 2 30 30 H 1.09003 * 109.46910 * 44.99095 * 6 5 3 31 31 H 0.96705 * 114.00210 * 299.99855 * 7 6 5 32 32 H 1.48509 * 110.00112 * 58.67843 * 8 6 5 33 33 H 1.48496 * 110.00070 * 179.97438 * 8 6 5 34 34 H 1.08004 * 120.05222 * 180.29918 * 9 5 3 35 35 H 0.97000 * 120.00483 * 359.73154 * 13 11 10 36 36 H 1.08994 * 113.61059 * 254.52914 * 16 14 13 37 37 H 1.08999 * 113.61315 * 25.34564 * 16 14 13 38 38 H 1.08002 * 126.90905 * 0.03152 * 20 19 17 39 39 H 1.07998 * 126.74832 * 179.97438 * 21 20 19 40 40 H 1.09001 * 113.61841 * 270.88817 * 24 17 16 41 41 H 1.09002 * 113.61254 * 139.98175 * 24 17 16 42 42 H 1.08002 * 120.04318 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5196 2.3779 -0.0005 5 6 3.5910 1.2096 -0.0005 6 6 4.3385 2.5182 -0.0011 7 8 4.2715 3.1044 -1.3026 8 14 6.1198 2.2162 0.4530 9 6 4.2859 0.0210 0.0054 10 6 3.5919 -1.1920 0.0006 11 6 4.3329 -2.4686 0.0017 12 8 5.5488 -2.4657 0.0017 13 7 3.6617 -3.6373 -0.0024 14 6 4.3973 -4.9043 -0.0074 15 1 5.4046 -4.8106 0.3979 16 6 3.6023 -6.0805 0.5839 17 6 4.1918 -6.9436 -0.5441 18 1 3.4786 -7.6473 -0.9735 19 7 5.4709 -7.5680 -0.1978 20 6 6.6906 -6.9937 -0.3136 21 6 7.5840 -7.9165 0.1132 22 7 6.8766 -8.9963 0.4641 23 7 5.6275 -8.7558 0.2727 24 6 4.3395 -5.6448 -1.3540 25 6 2.1947 -1.1931 0.0005 26 1 -0.3634 0.0005 1.0277 27 1 -0.3633 0.8897 -0.5143 28 1 -0.3633 -0.8903 -0.5134 29 1 1.3219 2.7182 0.8828 30 1 3.8879 3.1943 0.7255 31 1 4.6550 2.5564 -2.0011 32 1 6.7367 1.2707 -0.5119 33 1 6.8679 3.4989 0.4554 34 1 5.3660 0.0259 0.0099 35 1 2.6917 -3.6396 -0.0021 36 1 3.9349 -6.3758 1.5790 37 1 2.5216 -5.9535 0.5191 38 1 6.9076 -5.9990 -0.6740 39 1 8.6570 -7.8036 0.1603 40 1 3.4604 -5.3994 -1.9499 41 1 5.2672 -5.5885 -1.9234 42 1 1.6548 -2.1285 0.0014 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_13287732.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:44:47 Heat of formation + Delta-G solvation = 59.385433 kcal Electronic energy + Delta-G solvation = -27812.203226 eV Core-core repulsion = 23762.947595 eV Total energy + Delta-G solvation = -4049.255631 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.136 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -44.31010 -41.93001 -41.06157 -39.68031 -37.99218 -37.59714 -35.43984 -34.15589 -33.48339 -31.97522 -31.75349 -28.21215 -27.39293 -27.31494 -26.75620 -24.82582 -23.55789 -23.15082 -22.19631 -21.73688 -21.09165 -19.74329 -18.99370 -18.58920 -18.20198 -17.86200 -17.18667 -16.98317 -16.66603 -16.35962 -16.17214 -15.98467 -15.87942 -15.57702 -15.36738 -14.90846 -14.81888 -14.54989 -14.22931 -14.03141 -13.99507 -13.97686 -13.73470 -13.38929 -13.14485 -12.94989 -12.68405 -12.55243 -12.45504 -12.13435 -11.82604 -11.81419 -11.74228 -11.18631 -11.02213 -10.63140 -10.43787 -10.32228 -10.13267 -9.79516 -5.01444 -0.52178 -0.06167 0.59996 1.18326 1.19945 1.48560 1.55608 1.68110 1.78977 1.91179 2.41527 2.64445 2.89865 2.93847 3.19007 3.21899 3.37816 3.41186 3.46190 3.56735 3.58610 3.80943 3.93473 4.02288 4.05104 4.11025 4.14031 4.18411 4.29545 4.34636 4.36118 4.42392 4.44001 4.50074 4.53718 4.60608 4.74849 4.86959 4.93739 4.97940 5.09660 5.15121 5.23065 5.40341 5.60045 6.16060 6.34546 6.45973 6.92775 7.57801 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.117 4.117 3 C 0.163 3.837 4 O -0.484 6.484 5 C -0.148 4.148 6 C -0.062 4.062 7 O -0.520 6.520 8 Si 0.680 3.320 9 C -0.052 4.052 10 C -0.141 4.141 11 C 0.564 3.436 12 O -0.529 6.529 13 N -0.716 5.716 14 C 0.121 3.879 15 H 0.123 0.877 16 C -0.149 4.149 17 C 0.117 3.883 18 H 0.132 0.868 19 N -0.278 5.278 20 C -0.051 4.051 21 C -0.048 4.048 22 N -0.268 5.268 23 N -0.082 5.082 24 C -0.155 4.155 25 C -0.065 4.065 26 H 0.074 0.926 27 H 0.078 0.922 28 H 0.070 0.930 29 H 0.395 0.605 30 H 0.117 0.883 31 H 0.375 0.625 32 H -0.255 1.255 33 H -0.253 1.253 34 H 0.146 0.854 35 H 0.403 0.597 36 H 0.090 0.910 37 H 0.115 0.885 38 H 0.191 0.809 39 H 0.192 0.808 40 H 0.116 0.884 41 H 0.091 0.909 42 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.757 2.476 1.381 6.417 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.118 4.118 3 C 0.118 3.882 4 O -0.295 6.295 5 C -0.149 4.149 6 C -0.172 4.172 7 O -0.326 6.326 8 Si 0.581 3.419 9 C -0.070 4.070 10 C -0.145 4.145 11 C 0.353 3.647 12 O -0.406 6.406 13 N -0.368 5.368 14 C 0.015 3.985 15 H 0.141 0.859 16 C -0.188 4.188 17 C 0.014 3.986 18 H 0.150 0.850 19 N -0.072 5.072 20 C -0.201 4.201 21 C -0.204 4.204 22 N -0.134 5.134 23 N -0.061 5.061 24 C -0.194 4.194 25 C -0.084 4.084 26 H 0.093 0.907 27 H 0.097 0.903 28 H 0.089 0.911 29 H 0.253 0.747 30 H 0.135 0.865 31 H 0.222 0.778 32 H -0.180 1.180 33 H -0.177 1.177 34 H 0.163 0.837 35 H 0.240 0.760 36 H 0.109 0.891 37 H 0.133 0.867 38 H 0.208 0.792 39 H 0.209 0.791 40 H 0.135 0.865 41 H 0.109 0.891 42 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -5.011 1.667 1.299 5.439 hybrid contribution -0.329 1.040 -1.106 1.553 sum -5.340 2.708 0.194 5.991 Atomic orbital electron populations 1.20746 0.89647 1.03883 1.02902 1.20221 0.97354 0.92082 1.02139 1.18325 0.88788 0.85318 0.95794 1.84785 1.75583 1.35630 1.33460 1.20611 0.93843 0.95947 1.04533 1.24840 1.10145 0.93488 0.88719 1.86660 1.82665 1.47217 1.16071 0.95010 0.74423 0.81296 0.91175 1.21157 1.00891 0.90209 0.94780 1.19749 0.93442 0.93234 1.08029 1.18207 0.87263 0.83624 0.75645 1.90818 1.13305 1.87473 1.48980 1.45803 1.10235 1.04991 1.75774 1.22715 0.98232 0.81671 0.95845 0.85890 1.23799 1.01869 0.93687 0.99415 1.22268 0.82425 0.95338 0.98585 0.84997 1.47148 1.07346 1.11001 1.41670 1.23701 0.84475 1.02938 1.08966 1.23687 1.01774 0.90514 1.04459 1.75176 0.96604 1.23903 1.17752 1.78365 1.14064 0.98380 1.15300 1.23971 1.05619 0.91888 0.97941 1.21084 0.92516 0.97826 0.96956 0.90728 0.90347 0.91066 0.74692 0.86497 0.77768 1.17989 1.17728 0.83700 0.76036 0.89098 0.86686 0.79227 0.79108 0.86528 0.89081 0.85054 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.39 9.78 36.01 0.35 0.75 16 2 C -0.12 0.23 5.89 -104.54 -0.62 -0.39 16 3 C 0.16 -0.13 6.66 -39.02 -0.26 -0.39 16 4 O -0.48 0.51 11.85 -18.86 -0.22 0.29 16 5 C -0.15 0.08 5.27 -104.54 -0.55 -0.47 16 6 C -0.06 0.03 2.37 36.01 0.09 0.12 16 7 O -0.52 -0.79 12.88 -35.23 -0.45 -1.24 16 8 Si 0.68 -0.46 30.23 -169.99 -5.14 -5.60 16 9 C -0.05 0.00 8.20 -39.22 -0.32 -0.32 16 10 C -0.14 0.11 5.88 -104.96 -0.62 -0.50 16 11 C 0.56 -0.03 7.76 -12.44 -0.10 -0.12 16 12 O -0.53 -1.88 15.94 5.29 0.08 -1.80 16 13 N -0.72 2.44 5.30 -54.03 -0.29 2.16 16 14 C 0.12 -0.40 3.82 -67.11 -0.26 -0.66 16 15 H 0.12 -0.16 6.30 -51.93 -0.33 -0.49 16 16 C -0.15 0.66 7.63 -25.92 -0.20 0.46 16 17 C 0.12 -0.37 5.11 -67.13 -0.34 -0.71 16 18 H 0.13 -0.56 8.14 -51.92 -0.42 -0.98 16 19 N -0.28 -0.15 3.52 -53.98 -0.19 -0.34 16 20 C -0.05 0.00 9.68 -17.05 -0.17 -0.16 16 21 C -0.05 -0.08 12.05 -17.74 -0.21 -0.29 16 22 N -0.27 -1.38 12.41 30.23 0.38 -1.00 16 23 N -0.08 -0.35 13.16 60.35 0.79 0.45 16 24 C -0.15 0.68 7.13 -25.92 -0.18 0.49 16 25 C -0.07 0.18 9.18 -39.22 -0.36 -0.18 16 26 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 27 H 0.08 -0.18 7.52 -51.93 -0.39 -0.58 16 28 H 0.07 -0.31 8.08 -51.93 -0.42 -0.73 16 29 H 0.40 -2.18 9.06 45.56 0.41 -1.77 16 30 H 0.12 -0.21 7.82 -51.93 -0.41 -0.61 16 31 H 0.37 -0.41 8.70 45.56 0.40 -0.02 16 32 H -0.26 -0.44 6.69 56.52 0.38 -0.06 16 33 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 34 H 0.15 0.07 4.43 -52.48 -0.23 -0.16 16 35 H 0.40 -2.50 6.75 -40.82 -0.28 -2.78 16 36 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 37 H 0.11 -0.79 8.12 -51.93 -0.42 -1.21 16 38 H 0.19 -0.53 6.74 -52.49 -0.35 -0.88 16 39 H 0.19 -0.23 8.06 -52.49 -0.42 -0.66 16 40 H 0.12 -0.70 8.14 -51.93 -0.42 -1.12 16 41 H 0.09 -0.33 6.98 -51.93 -0.36 -0.69 16 42 H 0.13 -0.77 6.39 -52.49 -0.34 -1.10 16 LS Contribution 353.03 15.07 5.32 5.32 Total: 0.00 -12.11 353.03 -7.51 -19.62 By element: Atomic # 1 Polarization: -11.42 SS G_CDS: -4.05 Total: -15.47 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: -3.74 Total: -2.38 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: 0.69 Total: 1.26 kcal Atomic # 8 Polarization: -2.16 SS G_CDS: -0.59 Total: -2.75 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.14 Total: -5.60 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -12.11 -7.51 -19.62 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_13287732.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.007 kcal (2) G-P(sol) polarization free energy of solvation -12.109 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.898 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.621 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.385 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds