Wall clock time and date at job start Sun Mar 7 2021 09:45:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35989 * 117.00618 * 2 1 4 4 C 1.38556 * 120.06410 * 0.29182 * 3 2 1 5 5 C 1.38276 * 120.01959 * 180.23316 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.76899 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.49552 * 5 4 3 10 10 C 1.38380 * 120.13257 * 0.23043 * 9 5 4 11 11 Cl 1.73592 * 120.01361 * 180.02562 * 10 9 5 12 12 C 1.38626 * 119.97492 * 0.02562 * 10 9 5 13 13 O 1.36024 * 120.07361 * 179.97438 * 12 10 9 14 14 C 1.42899 * 117.00239 * 89.99806 * 13 12 10 15 15 C 1.53007 * 109.47013 * 89.99830 * 14 13 12 16 16 C 1.50703 * 109.46913 * 209.99676 * 14 13 12 17 17 O 1.21281 * 120.00246 * 0.02562 * 16 14 13 18 18 N 1.34779 * 119.99586 * 179.97438 * 16 14 13 19 19 C 1.46504 * 119.99662 * 179.97438 * 18 16 14 20 20 H 1.09004 * 112.84769 * 25.34127 * 19 18 16 21 21 C 1.53776 * 113.61065 * 156.53395 * 19 18 16 22 22 C 1.53777 * 87.08043 * 139.98442 * 21 19 18 23 23 H 1.09000 * 113.61515 * 219.92932 * 22 21 19 24 24 N 1.46508 * 113.61778 * 89.11348 * 22 21 19 25 25 C 1.35311 * 125.86770 * 274.72190 * 24 22 21 26 26 C 1.35358 * 106.17351 * 179.90083 * 25 24 22 27 27 N 1.33774 * 106.49549 * 0.35018 * 26 25 24 28 28 N 1.28639 * 108.88706 * 359.77369 * 27 26 25 29 29 C 1.53777 * 113.61789 * 254.14097 * 19 18 16 30 30 H 1.09002 * 109.46946 * 300.00477 * 1 2 3 31 31 H 1.09007 * 109.46991 * 60.00243 * 1 2 3 32 32 H 1.08994 * 109.47446 * 180.02562 * 1 2 3 33 33 H 1.08000 * 119.99081 * 0.02562 * 4 3 2 34 34 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 35 35 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 36 36 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 37 37 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 38 38 H 1.07994 * 119.93903 * 180.24913 * 9 5 4 39 39 H 1.08991 * 109.47121 * 329.99744 * 14 13 12 40 40 H 1.09000 * 109.46408 * 180.02562 * 15 14 13 41 41 H 1.08994 * 109.47224 * 299.99807 * 15 14 13 42 42 H 1.09004 * 109.47029 * 60.00265 * 15 14 13 43 43 H 0.96997 * 120.00536 * 0.02562 * 18 16 14 44 44 H 1.09011 * 113.61206 * 254.52894 * 21 19 18 45 45 H 1.08994 * 113.61656 * 25.43285 * 21 19 18 46 46 H 1.07995 * 126.91410 * 0.02562 * 25 24 22 47 47 H 1.07993 * 126.74852 * 180.11780 * 26 25 24 48 48 H 1.09005 * 113.61090 * 334.57057 * 29 19 18 49 49 H 1.08995 * 113.61460 * 105.47046 * 29 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0061 5 6 1.9221 3.6061 0.0012 6 6 1.1007 4.8696 0.0026 7 8 0.2759 4.9028 -1.1638 8 14 2.2349 6.3475 0.0035 9 6 3.3021 3.6810 0.0008 10 6 4.0607 2.5236 0.0004 11 17 5.7938 2.6212 0.0005 12 6 3.4359 1.2860 -0.0001 13 8 4.1796 0.1471 -0.0010 14 6 4.5348 -0.3969 1.2718 15 6 3.4536 -1.3796 1.7261 16 6 5.8536 -1.1175 1.1598 17 8 6.4326 -1.1605 0.0949 18 7 6.3901 -1.7132 2.2432 19 6 7.6719 -2.4142 2.1341 20 1 8.2908 -2.0403 1.3184 21 6 8.4226 -2.5366 3.4706 22 6 8.8020 -3.9623 3.0368 23 1 8.7620 -4.6904 3.8470 24 7 10.0495 -4.0307 2.2716 25 6 10.1720 -3.8453 0.9369 26 6 11.4873 -3.9950 0.6546 27 7 12.0958 -4.2688 1.8140 28 7 11.2164 -4.2827 2.7527 29 6 7.5401 -3.9461 2.1551 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5138 -0.8901 32 1 -0.3634 -1.0276 0.0005 33 1 0.2147 2.3192 0.0113 34 1 0.4722 4.8934 0.8929 35 1 0.7695 4.8843 -1.9952 36 1 1.4370 7.6000 0.0043 37 1 3.1200 6.3079 1.1952 38 1 3.7896 4.6446 0.0010 39 1 4.6220 0.4094 2.0000 40 1 3.7244 -1.7941 2.6972 41 1 2.4998 -0.8585 1.8072 42 1 3.3664 -2.1860 0.9979 43 1 5.9273 -1.6784 3.0949 44 1 9.2765 -1.8642 3.5551 45 1 7.7696 -2.5048 4.3427 46 1 9.3800 -3.6209 0.2378 47 1 11.9531 -3.9136 -0.3163 48 1 6.6452 -4.3003 2.6669 49 1 7.6823 -4.4100 1.1791 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_13428712.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:45:13 Heat of formation + Delta-G solvation = 31.916624 kcal Electronic energy + Delta-G solvation = -36832.246396 eV Core-core repulsion = 31792.242405 eV Total energy + Delta-G solvation = -5040.003991 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.128 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -44.27321 -42.05641 -41.37754 -40.05331 -39.32513 -38.84592 -37.75857 -36.95787 -35.36621 -33.77602 -32.73987 -31.92624 -31.44038 -31.41109 -28.76854 -27.35456 -27.15497 -26.73159 -25.32380 -23.71563 -23.52276 -23.31202 -22.76378 -21.72192 -21.11675 -19.78675 -18.86227 -18.80683 -18.45807 -18.31224 -17.73151 -17.58871 -17.19217 -16.99688 -16.43911 -16.36723 -16.30077 -16.10692 -16.00723 -15.78192 -15.71529 -15.49581 -15.04601 -14.75046 -14.59862 -14.38372 -14.05294 -13.97247 -13.92981 -13.76134 -13.71908 -13.49554 -13.33895 -13.02235 -12.85345 -12.71424 -12.65465 -12.50575 -12.46515 -12.10637 -12.09251 -11.99299 -11.89975 -11.78079 -11.36314 -11.02726 -10.71798 -10.65709 -10.34059 -10.28662 -9.88535 -9.47932 -5.15319 -0.38526 -0.07872 0.63373 0.87255 1.10535 1.23446 1.42477 1.49355 1.53401 1.71529 1.83459 2.05197 2.11104 2.60276 2.68739 2.93232 3.18457 3.22009 3.37405 3.45838 3.50207 3.62300 3.63957 3.70160 3.73805 3.83873 3.88721 3.95998 3.98772 4.03673 4.06480 4.08841 4.14992 4.20076 4.26915 4.33284 4.38237 4.39852 4.42082 4.47799 4.56207 4.60905 4.65416 4.76612 4.78370 4.99443 5.02300 5.11872 5.15564 5.26433 5.63478 5.80497 6.16613 6.33637 6.37100 7.02895 7.60937 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.297 6.297 3 C 0.132 3.868 4 C -0.170 4.170 5 C -0.068 4.068 6 C -0.068 4.068 7 O -0.537 6.537 8 Si 0.686 3.314 9 C -0.137 4.137 10 C -0.011 4.011 11 Cl -0.034 7.034 12 C 0.070 3.930 13 O -0.280 6.280 14 C 0.074 3.926 15 C -0.169 4.169 16 C 0.520 3.480 17 O -0.504 6.504 18 N -0.719 5.719 19 C 0.123 3.877 20 H 0.121 0.879 21 C -0.148 4.148 22 C 0.117 3.883 23 H 0.132 0.868 24 N -0.278 5.278 25 C -0.050 4.050 26 C -0.048 4.048 27 N -0.269 5.269 28 N -0.082 5.082 29 C -0.154 4.154 30 H 0.058 0.942 31 H 0.062 0.938 32 H 0.106 0.894 33 H 0.145 0.855 34 H 0.120 0.880 35 H 0.382 0.618 36 H -0.249 1.249 37 H -0.253 1.253 38 H 0.144 0.856 39 H 0.088 0.912 40 H 0.071 0.929 41 H 0.079 0.921 42 H 0.075 0.925 43 H 0.403 0.597 44 H 0.090 0.910 45 H 0.115 0.885 46 H 0.191 0.809 47 H 0.192 0.808 48 H 0.117 0.883 49 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.993 1.190 2.306 8.404 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.209 6.209 3 C 0.085 3.915 4 C -0.188 4.188 5 C -0.069 4.069 6 C -0.178 4.178 7 O -0.342 6.342 8 Si 0.587 3.413 9 C -0.156 4.156 10 C -0.039 4.039 11 Cl -0.005 7.005 12 C 0.024 3.976 13 O -0.195 6.195 14 C 0.015 3.985 15 C -0.227 4.227 16 C 0.305 3.695 17 O -0.376 6.376 18 N -0.373 5.373 19 C 0.018 3.982 20 H 0.139 0.861 21 C -0.187 4.187 22 C 0.014 3.986 23 H 0.150 0.850 24 N -0.072 5.072 25 C -0.200 4.200 26 C -0.205 4.205 27 N -0.135 5.135 28 N -0.062 5.062 29 C -0.193 4.193 30 H 0.077 0.923 31 H 0.080 0.920 32 H 0.125 0.875 33 H 0.163 0.837 34 H 0.137 0.863 35 H 0.230 0.770 36 H -0.174 1.174 37 H -0.178 1.178 38 H 0.161 0.839 39 H 0.106 0.894 40 H 0.090 0.910 41 H 0.098 0.902 42 H 0.094 0.906 43 H 0.239 0.761 44 H 0.108 0.892 45 H 0.133 0.867 46 H 0.208 0.792 47 H 0.209 0.791 48 H 0.135 0.865 49 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -6.676 1.303 3.496 7.648 hybrid contribution -1.461 0.017 -0.091 1.464 sum -8.137 1.320 3.405 8.919 Atomic orbital electron populations 1.23224 0.77591 1.04741 1.01856 1.86219 1.21782 1.25171 1.87769 1.19176 0.90771 0.85502 0.96048 1.21138 1.01023 0.90561 1.06121 1.20136 0.92865 0.95820 0.98055 1.25071 0.99706 1.01289 0.91770 1.86515 1.35470 1.96836 1.15390 0.94532 0.80864 0.76744 0.89135 1.20766 0.92780 0.97254 1.04771 1.20995 0.86617 0.93172 1.03107 1.98429 1.07183 1.98439 1.96422 1.17549 0.86660 0.85522 1.07839 1.86303 1.69428 1.37480 1.26321 1.22178 0.92995 0.96880 0.86464 1.22290 0.98820 0.99952 1.01620 1.20293 0.86186 0.78737 0.84264 1.90768 1.61530 1.57989 1.27359 1.45804 1.22734 1.56342 1.12436 1.22670 0.85302 0.91092 0.99147 0.86115 1.23792 1.01517 0.95092 0.98341 1.22318 0.79944 1.00622 0.95751 0.85027 1.47153 1.08245 1.45175 1.06604 1.23708 1.00705 1.09335 0.86256 1.23689 0.91275 1.06149 0.99359 1.75171 1.24150 1.16354 0.97795 1.78363 0.86804 1.18636 1.22356 1.23997 0.96435 0.97442 1.01469 0.92322 0.91975 0.87543 0.83693 0.86305 0.77008 1.17410 1.17800 0.83904 0.89386 0.91046 0.90236 0.90563 0.76126 0.89177 0.86667 0.79207 0.79112 0.86523 0.89070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.30 0.03 8.19 -34.21 -0.28 -0.25 16 3 C 0.13 0.06 6.54 -39.13 -0.26 -0.20 16 4 C -0.17 0.15 8.60 -39.45 -0.34 -0.18 16 5 C -0.07 0.08 5.39 -104.62 -0.56 -0.48 16 6 C -0.07 0.13 2.82 36.01 0.10 0.23 16 7 O -0.54 0.80 12.77 -35.23 -0.45 0.35 16 8 Si 0.69 -1.44 29.78 -169.99 -5.06 -6.50 16 9 C -0.14 0.08 8.45 -39.54 -0.33 -0.25 16 10 C -0.01 -0.01 6.33 -39.39 -0.25 -0.26 16 11 Cl -0.03 -0.07 28.50 -51.86 -1.48 -1.55 16 12 C 0.07 0.12 5.56 -39.10 -0.22 -0.10 16 13 O -0.28 -0.81 8.48 -47.44 -0.40 -1.21 16 14 C 0.07 -0.01 3.20 -27.88 -0.09 -0.10 16 15 C -0.17 0.39 9.00 37.16 0.33 0.72 16 16 C 0.52 0.38 7.23 -10.98 -0.08 0.30 16 17 O -0.50 -2.55 16.12 -14.35 -0.23 -2.78 16 18 N -0.72 2.14 5.25 -53.02 -0.28 1.86 16 19 C 0.12 -0.34 3.80 -67.12 -0.25 -0.59 16 20 H 0.12 -0.06 6.36 -51.93 -0.33 -0.39 16 21 C -0.15 0.58 7.63 -25.92 -0.20 0.38 16 22 C 0.12 -0.32 5.11 -67.03 -0.34 -0.66 16 23 H 0.13 -0.51 8.14 -51.93 -0.42 -0.93 16 24 N -0.28 -0.28 3.52 -53.88 -0.19 -0.47 16 25 C -0.05 -0.02 9.68 -17.04 -0.17 -0.19 16 26 C -0.05 -0.11 12.05 -17.73 -0.21 -0.32 16 27 N -0.27 -1.49 12.41 30.24 0.38 -1.12 16 28 N -0.08 -0.38 13.17 60.35 0.79 0.41 16 29 C -0.15 0.61 7.14 -25.83 -0.18 0.43 16 30 H 0.06 -0.25 7.65 -51.93 -0.40 -0.65 16 31 H 0.06 -0.22 7.68 -51.93 -0.40 -0.62 16 32 H 0.11 -0.49 8.14 -51.93 -0.42 -0.92 16 33 H 0.15 -0.32 6.30 -52.49 -0.33 -0.65 16 34 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 35 H 0.38 -1.91 8.70 45.56 0.40 -1.52 16 36 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 37 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 38 H 0.14 -0.29 4.86 -52.49 -0.26 -0.55 16 39 H 0.09 -0.14 7.91 -51.93 -0.41 -0.55 16 40 H 0.07 -0.36 7.57 -51.93 -0.39 -0.75 16 41 H 0.08 -0.15 6.28 -51.93 -0.33 -0.47 16 42 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 43 H 0.40 -2.42 8.13 -40.82 -0.33 -2.75 16 44 H 0.09 -0.19 8.14 -51.92 -0.42 -0.61 16 45 H 0.12 -0.74 8.11 -51.93 -0.42 -1.16 16 46 H 0.19 -0.40 6.74 -52.49 -0.35 -0.75 16 47 H 0.19 -0.14 8.06 -52.49 -0.42 -0.56 16 48 H 0.12 -0.67 8.14 -51.93 -0.42 -1.09 16 49 H 0.09 -0.29 6.96 -51.93 -0.36 -0.65 16 LS Contribution 420.72 15.07 6.34 6.34 Total: 0.00 -12.49 420.72 -8.98 -21.47 By element: Atomic # 1 Polarization: -10.13 SS G_CDS: -6.06 Total: -16.19 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -2.06 Total: -0.37 kcal Atomic # 7 Polarization: -0.02 SS G_CDS: 0.70 Total: 0.68 kcal Atomic # 8 Polarization: -2.52 SS G_CDS: -1.36 Total: -3.89 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.06 Total: -6.50 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.48 Total: -1.55 kcal Total LS contribution 6.34 Total: 6.34 kcal Total: -12.49 -8.98 -21.47 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_13428712.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.387 kcal (2) G-P(sol) polarization free energy of solvation -12.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.900 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.470 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds