Wall clock time and date at job start Sun Mar 7 2021 09:45:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.47135 * 2 1 4 4 C 1.50697 * 109.47099 * 240.00125 * 2 1 3 5 5 C 1.38267 * 119.94354 * 300.00004 * 4 2 1 6 6 C 1.38151 * 120.05677 * 180.02562 * 5 4 2 7 7 C 1.38733 * 119.94004 * 0.02562 * 6 5 4 8 8 O 1.35904 * 120.05128 * 180.02562 * 7 6 5 9 9 C 1.42903 * 116.99628 * 180.02562 * 8 7 6 10 10 C 1.50701 * 109.46878 * 179.97438 * 9 8 7 11 11 O 1.21280 * 119.99781 * 0.02562 * 10 9 8 12 12 N 1.34780 * 119.99795 * 179.97438 * 10 9 8 13 13 C 1.46497 * 119.99566 * 180.02562 * 12 10 9 14 14 H 1.09005 * 112.85572 * 336.20166 * 13 12 10 15 15 C 1.53787 * 113.61166 * 107.50579 * 13 12 10 16 16 C 1.53780 * 87.07920 * 89.11718 * 15 13 12 17 17 H 1.09007 * 113.61541 * 270.88275 * 16 15 13 18 18 N 1.46498 * 113.69429 * 139.99263 * 16 15 13 19 19 C 1.35317 * 125.86711 * 347.46357 * 18 16 15 20 20 C 1.35351 * 106.17721 * 179.97438 * 19 18 16 21 21 N 1.33770 * 106.49531 * 359.97438 * 20 19 18 22 22 N 1.28642 * 108.88897 * 359.73557 * 21 20 19 23 23 C 1.53777 * 113.61489 * 205.00300 * 13 12 10 24 24 C 1.38730 * 119.89273 * 0.27301 * 7 6 5 25 25 C 1.38147 * 119.94222 * 359.47199 * 24 7 6 26 26 H 0.96696 * 114.00044 * 300.00125 * 1 2 3 27 27 H 1.08997 * 109.46900 * 120.00198 * 2 1 3 28 28 H 1.48503 * 110.00146 * 178.67867 * 3 2 1 29 29 H 1.48500 * 110.00389 * 300.00204 * 3 2 1 30 30 H 1.08003 * 119.97542 * 0.02562 * 5 4 2 31 31 H 1.07998 * 120.02823 * 180.02562 * 6 5 4 32 32 H 1.09002 * 109.47382 * 59.99787 * 9 8 7 33 33 H 1.09001 * 109.46938 * 299.99774 * 9 8 7 34 34 H 0.96995 * 120.00011 * 0.02562 * 12 10 9 35 35 H 1.09003 * 113.61240 * 203.66112 * 15 13 12 36 36 H 1.08987 * 113.61320 * 334.56642 * 15 13 12 37 37 H 1.07997 * 126.90922 * 0.02562 * 19 18 16 38 38 H 1.07991 * 126.75249 * 179.97438 * 20 19 18 39 39 H 1.09004 * 113.61607 * 25.42965 * 23 13 12 40 40 H 1.08996 * 113.61755 * 156.33870 * 23 13 12 41 41 H 1.07997 * 120.03088 * 179.72386 * 24 7 6 42 42 H 1.07998 * 119.97468 * 180.26993 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5966 -2.0341 -1.4481 6 6 2.0562 -2.6878 -2.5751 7 6 2.8548 -2.0149 -3.4885 8 8 3.3078 -2.6556 -4.5981 9 6 4.1256 -1.9008 -5.4945 10 6 4.5309 -2.7697 -6.6572 11 8 4.1558 -3.9217 -6.7129 12 7 5.3092 -2.2663 -7.6356 13 6 5.7027 -3.1109 -8.7661 14 1 5.6767 -4.1745 -8.5291 15 6 4.9884 -2.7531 -10.0802 16 6 6.1395 -1.7687 -10.3462 17 1 5.9663 -0.7733 -9.9370 18 7 6.5791 -1.7407 -11.7434 19 6 6.2408 -2.6369 -12.6991 20 6 6.8624 -2.2331 -13.8316 21 7 7.5412 -1.1241 -13.5176 22 7 7.3480 -0.8555 -12.2745 23 6 7.0076 -2.6627 -9.4450 24 6 3.1944 -0.6886 -3.2647 25 6 2.7278 -0.0379 -2.1389 26 1 -0.3933 0.4417 0.7650 27 1 1.7923 -0.5139 0.8900 28 1 3.5346 1.7703 0.0322 29 1 1.5615 2.4679 -1.2084 30 1 0.9753 -2.5576 -0.7366 31 1 1.7942 -3.7216 -2.7449 32 1 5.0173 -1.5566 -4.9705 33 1 3.5650 -1.0409 -5.8611 34 1 5.6089 -1.3449 -7.5911 35 1 4.9454 -3.5773 -10.7922 36 1 4.0236 -2.2675 -9.9344 37 1 5.6024 -3.5001 -12.5820 38 1 6.8189 -2.7122 -14.7985 39 1 7.6729 -2.1040 -8.7866 40 1 7.5166 -3.4621 -9.9834 41 1 3.8195 -0.1639 -3.9720 42 1 2.9883 0.9959 -1.9663 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_2989410.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:45:38 Heat of formation + Delta-G solvation = 72.407795 kcal Electronic energy + Delta-G solvation = -26553.288848 eV Core-core repulsion = 22504.597908 eV Total energy + Delta-G solvation = -4048.690939 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.136 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -44.28608 -41.85966 -41.21778 -39.85319 -38.84699 -37.24911 -35.38567 -33.61242 -32.51818 -32.01659 -31.90190 -29.88465 -27.43622 -26.90415 -26.18224 -24.26594 -23.64384 -23.08016 -22.51694 -21.95444 -20.87775 -19.69569 -19.16252 -18.52086 -18.31604 -17.65015 -17.55218 -17.37525 -17.02891 -16.76252 -16.16684 -15.88577 -15.78722 -15.70468 -15.52780 -15.26207 -14.91542 -14.54815 -14.26633 -14.13881 -14.08118 -13.88706 -13.63536 -13.62513 -13.47665 -12.75429 -12.61516 -12.51819 -12.25341 -12.21917 -12.05759 -11.89358 -11.77013 -11.16610 -11.06790 -10.56921 -10.38223 -10.37074 -10.12329 -9.28750 -5.03600 0.19315 0.21757 0.56935 1.14932 1.20695 1.22494 1.24203 1.56586 1.64260 1.89607 2.29838 2.55156 2.62249 2.82447 3.10730 3.23032 3.31650 3.34575 3.47855 3.55125 3.68720 3.71884 3.72334 3.87307 3.94791 3.97340 4.07024 4.15445 4.17351 4.25952 4.30536 4.33759 4.38076 4.39901 4.46568 4.56266 4.70067 4.84715 5.01353 5.07151 5.14309 5.18676 5.43051 5.55182 5.57585 5.95756 6.18870 6.57676 6.80465 7.54323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.067 4.067 3 Si 0.682 3.318 4 C -0.111 4.111 5 C -0.047 4.047 6 C -0.142 4.142 7 C 0.133 3.867 8 O -0.287 6.287 9 C 0.039 3.961 10 C 0.522 3.478 11 O -0.504 6.504 12 N -0.715 5.715 13 C 0.131 3.869 14 H 0.123 0.877 15 C -0.154 4.154 16 C 0.115 3.885 17 H 0.134 0.866 18 N -0.283 5.283 19 C -0.051 4.051 20 C -0.049 4.049 21 N -0.270 5.270 22 N -0.086 5.086 23 C -0.147 4.147 24 C -0.204 4.204 25 C -0.083 4.083 26 H 0.382 0.618 27 H 0.075 0.925 28 H -0.256 1.256 29 H -0.251 1.251 30 H 0.137 0.863 31 H 0.139 0.861 32 H 0.097 0.903 33 H 0.097 0.903 34 H 0.405 0.595 35 H 0.110 0.890 36 H 0.094 0.906 37 H 0.190 0.810 38 H 0.191 0.809 39 H 0.095 0.905 40 H 0.110 0.890 41 H 0.131 0.869 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.152 1.390 4.854 5.179 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.178 4.178 3 Si 0.584 3.416 4 C -0.111 4.111 5 C -0.065 4.065 6 C -0.161 4.161 7 C 0.087 3.913 8 O -0.199 6.199 9 C -0.040 4.040 10 C 0.307 3.693 11 O -0.376 6.376 12 N -0.370 5.370 13 C 0.025 3.975 14 H 0.141 0.859 15 C -0.194 4.194 16 C 0.013 3.987 17 H 0.152 0.848 18 N -0.076 5.076 19 C -0.201 4.201 20 C -0.206 4.206 21 N -0.136 5.136 22 N -0.065 5.065 23 C -0.186 4.186 24 C -0.223 4.223 25 C -0.100 4.100 26 H 0.230 0.770 27 H 0.092 0.908 28 H -0.181 1.181 29 H -0.176 1.176 30 H 0.155 0.845 31 H 0.157 0.843 32 H 0.115 0.885 33 H 0.115 0.885 34 H 0.240 0.760 35 H 0.128 0.872 36 H 0.113 0.887 37 H 0.207 0.793 38 H 0.208 0.792 39 H 0.114 0.886 40 H 0.128 0.872 41 H 0.149 0.851 42 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -0.069 1.914 4.030 4.462 hybrid contribution -0.346 -0.762 -0.408 0.931 sum -0.415 1.152 3.622 3.824 Atomic orbital electron populations 1.86492 1.17265 1.81802 1.49703 1.24610 0.85670 1.10141 0.97368 0.95270 0.80577 0.78230 0.87566 1.19285 1.00556 0.94815 0.96458 1.20859 0.96359 0.93323 0.95980 1.20549 1.00191 1.01339 0.94016 1.19019 0.94549 0.90959 0.86737 1.86165 1.64247 1.38496 1.31031 1.22450 0.96612 0.94476 0.90413 1.20051 0.78398 0.88075 0.82775 1.90807 1.52394 1.17503 1.76920 1.45500 1.53105 1.15831 1.22528 1.21611 0.93875 0.97528 0.84524 0.85864 1.23976 0.98175 0.99098 0.98144 1.23515 0.97222 1.01993 0.76010 0.84839 1.47476 1.31995 1.17647 1.10530 1.23624 1.07139 1.00206 0.89155 1.23698 1.00023 0.96543 1.00338 1.75167 1.19745 1.14328 1.04367 1.78348 1.10431 1.13691 1.04066 1.23844 0.97050 1.00029 0.97704 1.21099 1.06221 0.94348 1.00607 1.20645 0.97248 0.98576 0.93566 0.77005 0.90751 1.18071 1.17610 0.84474 0.84347 0.88505 0.88545 0.75985 0.87190 0.88717 0.79271 0.79156 0.88640 0.87186 0.85089 0.86167 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.09 12.74 -35.23 -0.45 -0.36 16 2 C -0.07 0.03 2.81 36.00 0.10 0.13 16 3 Si 0.68 -1.04 29.78 -169.99 -5.06 -6.10 16 4 C -0.11 -0.20 5.42 -104.60 -0.57 -0.77 16 5 C -0.05 -0.08 9.60 -39.60 -0.38 -0.46 16 6 C -0.14 -0.29 9.99 -39.43 -0.39 -0.69 16 7 C 0.13 0.27 6.69 -39.22 -0.26 0.00 16 8 O -0.29 -0.65 9.67 -39.35 -0.38 -1.03 16 9 C 0.04 -0.08 5.22 36.01 0.19 0.11 16 10 C 0.52 -0.28 7.91 -10.98 -0.09 -0.37 16 11 O -0.50 -2.21 16.10 -14.35 -0.23 -2.44 16 12 N -0.72 2.95 5.26 -53.01 -0.28 2.67 16 13 C 0.13 -0.51 4.32 -67.12 -0.29 -0.80 16 14 H 0.12 -0.29 7.46 -51.93 -0.39 -0.68 16 15 C -0.15 0.69 7.23 -25.92 -0.19 0.50 16 16 C 0.11 -0.40 4.83 -67.12 -0.32 -0.73 16 17 H 0.13 -0.62 8.14 -51.92 -0.42 -1.04 16 18 N -0.28 -0.01 3.53 -53.97 -0.19 -0.20 16 19 C -0.05 0.05 10.78 -17.04 -0.18 -0.13 16 20 C -0.05 -0.05 12.05 -17.74 -0.21 -0.27 16 21 N -0.27 -1.30 12.41 30.23 0.38 -0.93 16 22 N -0.09 -0.34 13.17 60.35 0.79 0.46 16 23 C -0.15 0.65 7.62 -25.92 -0.20 0.45 16 24 C -0.20 -0.15 9.04 -39.43 -0.36 -0.51 16 25 C -0.08 -0.13 8.66 -39.60 -0.34 -0.48 16 26 H 0.38 -1.97 8.74 45.56 0.40 -1.58 16 27 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 28 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 29 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 30 H 0.14 0.04 8.06 -52.48 -0.42 -0.39 16 31 H 0.14 0.15 8.06 -52.49 -0.42 -0.27 16 32 H 0.10 -0.43 7.65 -51.93 -0.40 -0.82 16 33 H 0.10 -0.42 7.67 -51.93 -0.40 -0.81 16 34 H 0.41 -2.88 8.70 -40.82 -0.36 -3.24 16 35 H 0.11 -0.58 6.34 -51.93 -0.33 -0.91 16 36 H 0.09 -0.39 8.14 -51.94 -0.42 -0.81 16 37 H 0.19 -0.91 6.74 -52.49 -0.35 -1.27 16 38 H 0.19 -0.37 8.06 -52.49 -0.42 -0.79 16 39 H 0.10 -0.47 8.14 -51.93 -0.42 -0.89 16 40 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 41 H 0.13 -0.30 6.30 -52.49 -0.33 -0.63 16 42 H 0.12 0.10 4.87 -52.49 -0.26 -0.16 16 LS Contribution 358.24 15.07 5.40 5.40 Total: 0.00 -13.55 358.24 -8.50 -22.05 By element: Atomic # 1 Polarization: -10.54 SS G_CDS: -4.98 Total: -15.52 kcal Atomic # 6 Polarization: -0.50 SS G_CDS: -3.50 Total: -4.00 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: 0.70 Total: 2.00 kcal Atomic # 8 Polarization: -2.77 SS G_CDS: -1.06 Total: -3.83 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.06 Total: -6.10 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -13.55 -8.50 -22.05 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_2989410.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.457 kcal (2) G-P(sol) polarization free energy of solvation -13.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.049 kcal (6) G-S(sol) free energy of system = (1) + (5) 72.408 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds