Wall clock time and date at job start Sun Mar 7 2021 09:45:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47458 * 2 1 4 4 C 1.50700 * 109.47098 * 120.00478 * 2 1 3 5 5 C 1.38266 * 119.94640 * 64.99609 * 4 2 1 6 6 C 1.38145 * 120.05239 * 179.97438 * 5 4 2 7 7 C 1.38725 * 119.94620 * 359.97438 * 6 5 4 8 8 O 1.35899 * 120.05627 * 180.02562 * 7 6 5 9 9 C 1.42902 * 117.00290 * 180.02562 * 8 7 6 10 10 C 1.52998 * 109.47338 * 179.97438 * 9 8 7 11 11 C 1.50698 * 109.47304 * 179.97438 * 10 9 8 12 12 O 1.21287 * 119.99944 * 0.02562 * 11 10 9 13 13 N 1.34773 * 120.00173 * 180.02562 * 11 10 9 14 14 C 1.46498 * 120.00096 * 180.02562 * 13 11 10 15 15 H 1.09001 * 112.85524 * 23.79618 * 14 13 11 16 16 C 1.53781 * 113.61601 * 154.99805 * 14 13 11 17 17 C 1.53781 * 87.08319 * 139.97985 * 16 14 13 18 18 H 1.08999 * 113.61299 * 220.01410 * 17 16 14 19 19 N 1.46500 * 113.61465 * 89.19682 * 17 16 14 20 20 C 1.35309 * 125.87190 * 275.00090 * 19 17 16 21 21 C 1.35344 * 106.17783 * 180.02562 * 20 19 17 22 22 N 1.33770 * 106.49691 * 359.97438 * 21 20 19 23 23 N 1.28633 * 108.88478 * 359.73570 * 22 21 20 24 24 C 1.53779 * 87.07986 * 334.56572 * 17 16 14 25 25 C 1.38731 * 119.88981 * 359.97438 * 7 6 5 26 26 C 1.38143 * 119.94414 * 0.02562 * 25 7 6 27 27 H 0.96699 * 113.99872 * 300.00226 * 1 2 3 28 28 H 1.09003 * 109.46753 * 239.99942 * 2 1 3 29 29 H 1.48504 * 109.99950 * 300.00030 * 3 2 1 30 30 H 1.48494 * 110.00211 * 61.32147 * 3 2 1 31 31 H 1.07993 * 119.96871 * 0.25782 * 5 4 2 32 32 H 1.08000 * 120.02375 * 180.02562 * 6 5 4 33 33 H 1.09000 * 109.46773 * 299.99747 * 9 8 7 34 34 H 1.08993 * 109.47213 * 59.99622 * 9 8 7 35 35 H 1.09000 * 109.47222 * 299.99766 * 10 9 8 36 36 H 1.09006 * 109.46858 * 59.99614 * 10 9 8 37 37 H 0.97002 * 119.99985 * 359.97438 * 13 11 10 38 38 H 1.09007 * 113.61121 * 254.53000 * 16 14 13 39 39 H 1.08993 * 113.61837 * 25.42740 * 16 14 13 40 40 H 1.08000 * 126.90971 * 359.97438 * 20 19 17 41 41 H 1.08008 * 126.75483 * 179.97438 * 21 20 19 42 42 H 1.09001 * 113.61551 * 270.88371 * 24 17 16 43 43 H 1.09008 * 113.61348 * 139.97899 * 24 17 16 44 44 H 1.08001 * 120.02847 * 179.97438 * 25 7 6 45 45 H 1.08001 * 119.97009 * 180.02562 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6839 -2.0606 1.3971 6 6 2.1438 -2.7142 2.5239 7 6 2.8548 -2.0150 3.4883 8 8 3.3088 -2.6559 4.5974 9 6 4.0329 -1.8728 5.5485 10 6 4.4591 -2.7595 6.7203 11 6 5.2232 -1.9338 7.7230 12 8 5.4082 -0.7524 7.5206 13 7 5.7009 -2.5082 8.8447 14 6 6.4433 -1.7055 9.8198 15 1 6.2043 -0.6435 9.7634 16 6 6.3959 -2.2726 11.2484 17 6 7.8779 -1.8802 11.3691 18 1 8.4836 -2.6186 11.8945 19 7 8.0856 -0.5173 11.8646 20 6 8.0876 0.6079 11.1131 21 6 8.3149 1.6321 11.9683 22 7 8.4386 1.0905 13.1852 23 7 8.2918 -0.1839 13.0907 24 6 7.9527 -1.9990 9.8377 25 6 3.1026 -0.6607 3.3182 26 6 2.6406 -0.0116 2.1896 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5139 -0.8900 29 1 1.5616 2.4679 -1.2085 30 1 1.5881 2.4585 1.2242 31 1 1.1347 -2.6055 0.6437 32 1 1.9507 -3.7689 2.6535 33 1 4.9172 -1.4494 5.0724 34 1 3.3969 -1.0673 5.9154 35 1 3.5745 -3.1826 7.1963 36 1 5.0950 -3.5653 6.3537 37 1 5.5526 -3.4530 9.0068 38 1 5.7406 -1.7152 11.9179 39 1 6.2245 -3.3483 11.2857 40 1 7.9388 0.6751 10.0456 41 1 8.3829 2.6804 11.7175 42 1 8.2071 -3.0000 9.4893 43 1 8.5545 -1.2207 9.3683 44 1 3.6556 -0.1140 4.0677 45 1 2.8337 1.0427 2.0565 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_4549602.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:45:42 Heat of formation + Delta-G solvation = 60.742929 kcal Electronic energy + Delta-G solvation = -28424.307340 eV Core-core repulsion = 24219.572955 eV Total energy + Delta-G solvation = -4204.734385 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -44.33840 -41.64261 -41.21367 -39.92210 -39.14568 -37.27933 -35.41696 -33.77755 -33.09466 -32.04944 -31.98471 -31.44151 -27.44773 -27.40650 -26.38118 -25.46101 -23.74764 -23.58268 -23.06419 -22.23891 -21.78115 -21.10048 -19.59012 -18.68966 -18.46982 -17.94756 -17.89802 -17.62272 -17.16766 -16.96711 -16.45736 -16.25662 -16.16261 -16.04084 -15.71125 -15.59424 -15.10983 -14.87990 -14.75350 -14.51947 -14.32343 -14.26277 -14.04165 -13.86428 -13.77057 -13.45290 -13.01899 -12.94199 -12.71428 -12.56023 -12.20261 -12.16983 -12.08832 -11.87958 -11.84397 -11.55956 -11.24163 -11.05356 -10.57540 -10.47193 -10.35131 -10.03772 -9.22379 -4.96418 0.28756 0.31083 0.57115 1.17080 1.26856 1.29325 1.49135 1.58741 1.65702 1.96163 2.28236 2.61142 2.65475 2.86107 3.14304 3.33391 3.39610 3.43157 3.55518 3.63356 3.68998 3.72834 3.80145 3.90447 3.93521 3.98973 4.08090 4.12224 4.16456 4.25081 4.26268 4.32668 4.33100 4.40822 4.45476 4.51717 4.55229 4.58137 4.70900 4.72105 4.95245 5.04446 5.17100 5.20234 5.28009 5.49409 5.57076 5.69881 6.07229 6.30952 6.41297 6.84109 7.55145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.682 3.318 4 C -0.156 4.156 5 C -0.053 4.053 6 C -0.150 4.150 7 C 0.137 3.863 8 O -0.316 6.316 9 C 0.073 3.927 10 C -0.142 4.142 11 C 0.523 3.477 12 O -0.534 6.534 13 N -0.718 5.718 14 C 0.120 3.880 15 H 0.122 0.878 16 C -0.149 4.149 17 C 0.117 3.883 18 H 0.132 0.868 19 N -0.278 5.278 20 C -0.051 4.051 21 C -0.048 4.048 22 N -0.268 5.268 23 N -0.081 5.081 24 C -0.154 4.154 25 C -0.203 4.203 26 C -0.077 4.077 27 H 0.376 0.624 28 H 0.117 0.883 29 H -0.257 1.257 30 H -0.261 1.261 31 H 0.133 0.867 32 H 0.134 0.866 33 H 0.074 0.926 34 H 0.073 0.927 35 H 0.109 0.891 36 H 0.109 0.891 37 H 0.407 0.593 38 H 0.089 0.911 39 H 0.116 0.884 40 H 0.190 0.810 41 H 0.192 0.808 42 H 0.117 0.883 43 H 0.090 0.910 44 H 0.134 0.866 45 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.591 -5.094 -2.082 5.728 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.584 3.416 4 C -0.156 4.156 5 C -0.071 4.071 6 C -0.169 4.169 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.310 3.690 12 O -0.410 6.410 13 N -0.370 5.370 14 C 0.014 3.986 15 H 0.140 0.860 16 C -0.188 4.188 17 C 0.013 3.987 18 H 0.150 0.850 19 N -0.072 5.072 20 C -0.201 4.201 21 C -0.204 4.204 22 N -0.134 5.134 23 N -0.061 5.061 24 C -0.193 4.193 25 C -0.221 4.221 26 C -0.095 4.095 27 H 0.223 0.777 28 H 0.135 0.865 29 H -0.182 1.182 30 H -0.186 1.186 31 H 0.151 0.849 32 H 0.151 0.849 33 H 0.092 0.908 34 H 0.091 0.909 35 H 0.127 0.873 36 H 0.128 0.872 37 H 0.242 0.758 38 H 0.108 0.892 39 H 0.134 0.866 40 H 0.207 0.793 41 H 0.209 0.791 42 H 0.135 0.865 43 H 0.109 0.891 44 H 0.152 0.848 45 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.740 -4.415 -1.273 4.913 hybrid contribution -1.145 -0.160 -0.435 1.235 sum 0.595 -4.575 -1.707 4.920 Atomic orbital electron populations 1.86598 1.17845 1.79938 1.49324 1.24938 0.83842 1.10760 0.98394 0.95022 0.91724 0.74710 0.80124 1.20178 1.02616 0.95113 0.97710 1.20844 0.96496 0.93469 0.96267 1.20503 1.01744 1.00831 0.93812 1.18983 0.94170 0.90949 0.86715 1.85972 1.69098 1.38475 1.29440 1.22417 0.96474 0.93267 0.88065 1.21476 1.02252 0.99631 0.94835 1.20386 0.78558 0.88023 0.82045 1.90762 1.57881 1.16049 1.76355 1.45865 1.56820 1.13391 1.20915 1.22706 0.90539 0.97993 0.87347 0.86048 1.23802 0.94759 1.03705 0.96525 1.22277 0.99631 0.79740 0.97023 0.84997 1.47154 1.45875 1.07836 1.06314 1.23686 1.09721 0.85772 1.00938 1.23693 1.06327 1.01299 0.89118 1.75177 1.16414 0.99265 1.22568 1.78371 1.18291 1.09534 0.99865 1.23960 0.97784 1.05399 0.92175 1.21256 1.06340 0.93859 1.00670 1.20857 0.96182 0.99441 0.92976 0.77689 0.86481 1.18233 1.18611 0.84898 0.84855 0.90760 0.90922 0.87311 0.87245 0.75784 0.89192 0.86616 0.79255 0.79099 0.86482 0.89114 0.84846 0.85328 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.72 12.83 -35.23 -0.45 -1.17 16 2 C -0.07 0.01 2.80 36.01 0.10 0.11 16 3 Si 0.68 -0.51 29.88 -169.99 -5.08 -5.59 16 4 C -0.16 -0.04 5.35 -104.60 -0.56 -0.60 16 5 C -0.05 -0.02 9.68 -39.61 -0.38 -0.41 16 6 C -0.15 -0.10 9.99 -39.44 -0.39 -0.50 16 7 C 0.14 0.14 6.69 -39.22 -0.26 -0.12 16 8 O -0.32 -0.13 10.14 -19.42 -0.20 -0.33 16 9 C 0.07 -0.10 4.03 37.16 0.15 0.05 16 10 C -0.14 0.54 6.07 -27.89 -0.17 0.37 16 11 C 0.52 -1.14 7.83 -10.99 -0.09 -1.23 16 12 O -0.53 -0.94 15.58 5.55 0.09 -0.85 16 13 N -0.72 3.43 5.35 -53.02 -0.28 3.15 16 14 C 0.12 -0.48 3.82 -67.12 -0.26 -0.74 16 15 H 0.12 -0.23 6.31 -51.93 -0.33 -0.56 16 16 C -0.15 0.70 7.63 -25.92 -0.20 0.51 16 17 C 0.12 -0.41 5.10 -67.12 -0.34 -0.75 16 18 H 0.13 -0.59 8.14 -51.93 -0.42 -1.01 16 19 N -0.28 -0.08 3.52 -53.98 -0.19 -0.27 16 20 C -0.05 0.02 9.69 -17.05 -0.17 -0.14 16 21 C -0.05 -0.07 12.05 -17.74 -0.21 -0.28 16 22 N -0.27 -1.33 12.41 30.23 0.38 -0.96 16 23 N -0.08 -0.33 13.16 60.35 0.79 0.46 16 24 C -0.15 0.77 7.13 -25.92 -0.18 0.59 16 25 C -0.20 -0.09 9.04 -39.43 -0.36 -0.44 16 26 C -0.08 0.00 8.66 -39.61 -0.34 -0.35 16 27 H 0.38 -0.50 8.70 45.56 0.40 -0.11 16 28 H 0.12 -0.11 7.96 -51.93 -0.41 -0.52 16 29 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 30 H -0.26 -0.31 7.01 56.52 0.40 0.08 16 31 H 0.13 -0.06 8.06 -52.49 -0.42 -0.49 16 32 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 33 H 0.07 -0.08 7.62 -51.93 -0.40 -0.48 16 34 H 0.07 -0.06 7.62 -51.93 -0.40 -0.45 16 35 H 0.11 -0.54 8.14 -51.93 -0.42 -0.97 16 36 H 0.11 -0.58 8.14 -51.93 -0.42 -1.00 16 37 H 0.41 -3.09 8.73 -40.82 -0.36 -3.45 16 38 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.12 -0.82 8.12 -51.93 -0.42 -1.25 16 40 H 0.19 -0.61 6.75 -52.49 -0.35 -0.96 16 41 H 0.19 -0.28 8.06 -52.48 -0.42 -0.70 16 42 H 0.12 -0.78 8.14 -51.93 -0.42 -1.21 16 43 H 0.09 -0.39 6.99 -51.92 -0.36 -0.75 16 44 H 0.13 -0.10 6.30 -52.49 -0.33 -0.43 16 45 H 0.13 -0.19 4.84 -52.49 -0.25 -0.44 16 LS Contribution 377.36 15.07 5.69 5.69 Total: 0.00 -11.20 377.36 -8.72 -19.93 By element: Atomic # 1 Polarization: -10.32 SS G_CDS: -5.80 Total: -16.12 kcal Atomic # 6 Polarization: -0.27 SS G_CDS: -3.66 Total: -3.93 kcal Atomic # 7 Polarization: 1.69 SS G_CDS: 0.70 Total: 2.39 kcal Atomic # 8 Polarization: -1.79 SS G_CDS: -0.56 Total: -2.35 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.08 Total: -5.59 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -11.20 -8.72 -19.93 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_4549602.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.670 kcal (2) G-P(sol) polarization free energy of solvation -11.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.927 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.743 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds