Wall clock time and date at job start Sun Mar 7 2021 09:46:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86306 * 109.46941 * 2 1 4 4 C 1.50697 * 109.47306 * 120.00061 * 2 1 3 5 5 C 1.38261 * 119.94581 * 65.00210 * 4 2 1 6 6 C 1.38146 * 120.05740 * 180.02562 * 5 4 2 7 7 C 1.38726 * 119.94396 * 359.97438 * 6 5 4 8 8 O 1.35900 * 120.05623 * 180.02562 * 7 6 5 9 9 C 1.42901 * 117.00145 * 180.02562 * 8 7 6 10 10 C 1.50696 * 109.47186 * 179.97438 * 9 8 7 11 11 C 1.36415 * 125.79962 * 89.99840 * 10 9 8 12 12 C 1.47380 * 127.19440 * 359.96571 * 11 10 9 13 13 O 1.21614 * 119.99787 * 359.97438 * 12 11 10 14 14 N 1.34780 * 119.99945 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99769 * 179.97438 * 14 12 11 16 16 H 1.08997 * 112.85099 * 336.19494 * 15 14 12 17 17 C 1.53779 * 113.69123 * 107.46801 * 15 14 12 18 18 C 1.53779 * 87.08402 * 89.12592 * 17 15 14 19 19 H 1.09002 * 113.61557 * 270.88569 * 18 17 15 20 20 N 1.46497 * 113.61581 * 139.98450 * 18 17 15 21 21 C 1.35311 * 125.86662 * 347.49716 * 20 18 17 22 22 C 1.35348 * 106.17691 * 180.02562 * 21 20 18 23 23 N 1.33767 * 106.49579 * 0.02562 * 22 21 20 24 24 N 1.28637 * 108.88721 * 359.73752 * 23 22 21 25 25 C 1.53784 * 87.08045 * 25.43458 * 18 17 15 26 26 C 1.47030 * 105.61671 * 180.22374 * 11 10 9 27 27 C 1.34180 * 105.94644 * 359.62933 * 26 11 10 28 28 O 1.33648 * 125.80481 * 269.99635 * 10 9 8 29 29 C 1.38736 * 119.88720 * 0.27825 * 7 6 5 30 30 C 1.38139 * 119.94598 * 359.47022 * 29 7 6 31 31 H 0.96704 * 114.00568 * 60.00254 * 1 2 3 32 32 H 1.08999 * 109.47190 * 240.00281 * 2 1 3 33 33 H 1.48498 * 109.99791 * 298.68095 * 3 2 1 34 34 H 1.48498 * 109.99828 * 59.99917 * 3 2 1 35 35 H 1.08000 * 119.97191 * 0.02562 * 5 4 2 36 36 H 1.07999 * 120.02830 * 180.02562 * 6 5 4 37 37 H 1.09003 * 109.47145 * 59.99474 * 9 8 7 38 38 H 1.09003 * 109.47042 * 299.99432 * 9 8 7 39 39 H 0.96998 * 119.99913 * 0.02562 * 14 12 11 40 40 H 1.09006 * 113.61280 * 203.67416 * 17 15 14 41 41 H 1.09007 * 113.61383 * 334.57384 * 17 15 14 42 42 H 1.08002 * 126.91500 * 0.02863 * 21 20 18 43 43 H 1.08005 * 126.75698 * 180.02562 * 22 21 20 44 44 H 1.09004 * 113.61451 * 220.02152 * 25 18 17 45 45 H 1.08994 * 113.61477 * 89.11454 * 25 18 17 46 46 H 1.07990 * 127.02505 * 179.73927 * 26 11 10 47 47 H 1.08000 * 125.43114 * 180.12048 * 27 26 11 48 48 H 1.08005 * 120.02549 * 179.71815 * 29 7 6 49 49 H 1.08003 * 119.97524 * 180.27387 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6841 -2.0605 1.3972 6 6 2.1431 -2.7139 2.5245 7 6 2.8531 -2.0144 3.4894 8 8 3.3061 -2.6550 4.5990 9 6 4.0292 -1.8717 5.5507 10 6 4.4481 -2.7447 6.7053 11 6 5.6156 -3.4448 6.7939 12 6 6.7000 -3.4985 5.7973 13 8 6.6038 -2.8716 4.7596 14 7 7.7983 -4.2423 6.0360 15 6 8.8760 -4.2961 5.0451 16 1 8.5352 -4.0645 4.0360 17 6 10.1378 -3.5222 5.4619 18 6 10.6174 -4.8206 6.1321 19 1 10.2925 -4.9233 7.1675 20 7 12.0486 -5.0783 5.9554 21 6 12.8699 -4.4337 5.0946 22 6 14.0953 -4.9844 5.2587 23 7 13.9654 -5.9268 6.1990 24 7 12.7419 -5.9540 6.5951 25 6 9.7273 -5.5740 5.1295 26 6 5.5632 -4.1396 8.0886 27 6 4.3944 -3.7902 8.6475 28 8 3.7390 -2.9647 7.8166 29 6 3.0953 -0.6586 3.3222 30 6 2.6387 -0.0109 2.1907 31 1 -0.3934 0.4417 -0.7651 32 1 1.7923 -0.5138 -0.8900 33 1 1.5877 2.4586 -1.2242 34 1 1.5613 2.4679 1.2085 35 1 1.1316 -2.6047 0.6455 36 1 1.9500 -3.7686 2.6541 37 1 3.3927 -1.0661 5.9168 38 1 4.9140 -1.4481 5.0753 39 1 7.8749 -4.7426 6.8635 40 1 10.7569 -3.2108 4.6205 41 1 9.9415 -2.7139 6.1663 42 1 12.6015 -3.6395 4.4136 43 1 15.0002 -4.7157 4.7337 44 1 9.1996 -6.4222 5.5657 45 1 10.2341 -5.8235 4.1974 46 1 6.3130 -4.7955 8.5054 47 1 4.0363 -4.1237 9.6102 48 1 3.6439 -0.1109 4.0742 49 1 2.8309 1.0436 2.0580 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_4549634.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:46:01 Heat of formation + Delta-G solvation = 91.167602 kcal Electronic energy + Delta-G solvation = -35593.987572 eV Core-core repulsion = 30687.211887 eV Total energy + Delta-G solvation = -4906.775686 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.152 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -44.24962 -43.83894 -41.43080 -41.18552 -39.56109 -39.06841 -37.32114 -35.32769 -34.29952 -33.25316 -32.83141 -31.97265 -31.93498 -31.45800 -28.15421 -27.36955 -26.97098 -26.08431 -24.83982 -23.76870 -23.58260 -23.05715 -22.45030 -22.10409 -21.21863 -20.64398 -19.45485 -19.41093 -18.89964 -18.50503 -17.63783 -17.49826 -17.31027 -17.23652 -16.87497 -16.74798 -16.69621 -16.16496 -15.98371 -15.89806 -15.64705 -15.57081 -15.37077 -15.07376 -14.70691 -14.41100 -14.35319 -14.11329 -14.03662 -14.00809 -13.91810 -13.81279 -13.53340 -13.48284 -13.04940 -12.71152 -12.53778 -12.42877 -12.18958 -12.13874 -11.84236 -11.72375 -11.64378 -11.19115 -11.07352 -11.02448 -10.45847 -10.43657 -10.33470 -9.97482 -9.94883 -9.12934 -4.96132 -0.07639 0.37224 0.39896 0.61009 0.82191 1.28006 1.29615 1.39073 1.59094 1.67631 1.80083 1.95245 2.01256 2.44601 2.68866 2.69263 2.90118 3.19421 3.23078 3.37122 3.39721 3.46628 3.51925 3.55470 3.74633 3.85606 3.88392 3.98321 3.99493 4.04449 4.08436 4.13427 4.22678 4.23013 4.30041 4.32447 4.35588 4.41519 4.43361 4.47114 4.52257 4.60575 4.65313 4.72891 4.74703 4.99706 5.02334 5.16379 5.22030 5.23603 5.34060 5.58751 5.59372 5.74970 5.75182 6.18509 6.34106 6.46312 6.95708 7.58089 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.681 3.319 4 C -0.111 4.111 5 C -0.051 4.051 6 C -0.148 4.148 7 C 0.141 3.859 8 O -0.304 6.304 9 C 0.134 3.866 10 C 0.070 3.930 11 C -0.214 4.214 12 C 0.596 3.404 13 O -0.525 6.525 14 N -0.709 5.709 15 C 0.131 3.869 16 H 0.123 0.877 17 C -0.154 4.154 18 C 0.115 3.885 19 H 0.133 0.867 20 N -0.282 5.282 21 C -0.051 4.051 22 C -0.050 4.050 23 N -0.271 5.271 24 N -0.086 5.086 25 C -0.148 4.148 26 C -0.197 4.197 27 C -0.013 4.013 28 O -0.164 6.164 29 C -0.201 4.201 30 C -0.073 4.073 31 H 0.379 0.621 32 H 0.075 0.925 33 H -0.262 1.262 34 H -0.256 1.256 35 H 0.132 0.868 36 H 0.133 0.867 37 H 0.084 0.916 38 H 0.117 0.883 39 H 0.404 0.596 40 H 0.109 0.891 41 H 0.094 0.906 42 H 0.190 0.810 43 H 0.191 0.809 44 H 0.094 0.906 45 H 0.109 0.891 46 H 0.162 0.838 47 H 0.215 0.785 48 H 0.133 0.867 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.149 2.295 -0.353 2.327 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.582 3.418 4 C -0.111 4.111 5 C -0.069 4.069 6 C -0.166 4.166 7 C 0.096 3.904 8 O -0.217 6.217 9 C 0.059 3.941 10 C 0.017 3.983 11 C -0.219 4.219 12 C 0.385 3.615 13 O -0.403 6.403 14 N -0.361 5.361 15 C 0.025 3.975 16 H 0.141 0.859 17 C -0.194 4.194 18 C 0.013 3.987 19 H 0.151 0.849 20 N -0.076 5.076 21 C -0.201 4.201 22 C -0.207 4.207 23 N -0.137 5.137 24 N -0.065 5.065 25 C -0.187 4.187 26 C -0.216 4.216 27 C -0.079 4.079 28 O -0.059 6.059 29 C -0.220 4.220 30 C -0.091 4.091 31 H 0.226 0.774 32 H 0.093 0.907 33 H -0.187 1.187 34 H -0.181 1.181 35 H 0.150 0.850 36 H 0.151 0.849 37 H 0.102 0.898 38 H 0.135 0.865 39 H 0.239 0.761 40 H 0.127 0.873 41 H 0.112 0.888 42 H 0.207 0.793 43 H 0.208 0.792 44 H 0.113 0.887 45 H 0.127 0.873 46 H 0.180 0.820 47 H 0.231 0.769 48 H 0.150 0.850 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.367 2.079 0.667 2.214 hybrid contribution -0.821 0.458 -0.609 1.120 sum -1.188 2.537 0.058 2.802 Atomic orbital electron populations 1.86599 1.17978 1.80105 1.49712 1.24721 0.84299 1.10764 0.98257 0.95083 0.91722 0.74820 0.80152 1.19132 1.01515 0.94253 0.96221 1.20802 0.96274 0.93545 0.96278 1.20459 1.01698 1.00840 0.93651 1.18931 0.94026 0.90947 0.86480 1.86081 1.68748 1.37768 1.29152 1.21122 0.98458 0.90375 0.84114 1.21978 0.89941 0.98856 0.87534 1.21117 0.97618 1.05381 0.97794 1.17153 0.80655 0.78556 0.85156 1.90818 1.79507 1.43741 1.26184 1.45439 1.18239 1.50286 1.22154 1.21597 0.85741 0.95359 0.94847 0.85865 1.23976 0.97213 0.96161 1.02011 1.23520 0.74010 0.98855 1.02353 0.84891 1.47485 1.10179 1.24301 1.25595 1.23616 0.91235 1.04143 1.01131 1.23692 0.98779 0.97463 1.00742 1.75163 1.08455 1.18340 1.11717 1.78344 0.98946 1.11068 1.18183 1.23848 0.96379 0.98142 1.00349 1.22887 0.99915 1.04381 0.94385 1.24085 0.93020 0.94178 0.96640 1.83815 1.43987 1.53049 1.25029 1.21145 1.06571 0.93671 1.00592 1.20757 0.96469 0.99236 0.92591 0.77359 0.90684 1.18688 1.18052 0.85010 0.84862 0.89807 0.86543 0.76091 0.87261 0.88763 0.79277 0.79195 0.88707 0.87255 0.82041 0.76864 0.84968 0.85285 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.84 12.81 -35.23 -0.45 -1.29 16 2 C -0.07 -0.02 2.79 36.00 0.10 0.08 16 3 Si 0.68 -0.40 29.85 -169.99 -5.07 -5.47 16 4 C -0.11 -0.20 5.39 -104.60 -0.56 -0.77 16 5 C -0.05 -0.10 9.68 -39.61 -0.38 -0.48 16 6 C -0.15 -0.36 9.99 -39.43 -0.39 -0.75 16 7 C 0.14 0.38 6.69 -39.22 -0.26 0.12 16 8 O -0.30 -0.92 10.12 -19.42 -0.20 -1.12 16 9 C 0.13 0.11 4.74 36.00 0.17 0.28 16 10 C 0.07 0.07 7.00 -34.97 -0.24 -0.17 16 11 C -0.21 -0.01 6.31 -103.27 -0.65 -0.67 16 12 C 0.60 0.20 7.81 -12.54 -0.10 0.10 16 13 O -0.53 -1.68 14.45 5.27 0.08 -1.61 16 14 N -0.71 2.10 5.26 -54.10 -0.28 1.82 16 15 C 0.13 -0.47 4.32 -67.12 -0.29 -0.76 16 16 H 0.12 -0.28 7.46 -51.93 -0.39 -0.67 16 17 C -0.15 0.68 7.23 -25.92 -0.19 0.49 16 18 C 0.11 -0.37 4.84 -67.12 -0.32 -0.70 16 19 H 0.13 -0.56 8.14 -51.93 -0.42 -0.98 16 20 N -0.28 -0.03 3.53 -53.97 -0.19 -0.22 16 21 C -0.05 0.06 10.77 -17.05 -0.18 -0.13 16 22 C -0.05 -0.05 12.05 -17.74 -0.21 -0.26 16 23 N -0.27 -1.30 12.41 30.23 0.38 -0.92 16 24 N -0.09 -0.34 13.17 60.35 0.79 0.45 16 25 C -0.15 0.59 7.63 -25.91 -0.20 0.40 16 26 C -0.20 0.49 10.60 -37.45 -0.40 0.09 16 27 C -0.01 0.03 12.03 29.30 0.35 0.38 16 28 O -0.16 -0.08 10.52 7.68 0.08 0.00 16 29 C -0.20 -0.28 9.04 -39.43 -0.36 -0.64 16 30 C -0.07 -0.09 8.66 -39.60 -0.34 -0.43 16 31 H 0.38 -0.93 8.74 45.56 0.40 -0.53 16 32 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 33 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 34 H -0.26 -0.62 7.05 56.52 0.40 -0.22 16 35 H 0.13 0.09 8.06 -52.49 -0.42 -0.34 16 36 H 0.13 0.18 8.06 -52.49 -0.42 -0.24 16 37 H 0.08 -0.09 7.65 -51.93 -0.40 -0.49 16 38 H 0.12 0.07 6.02 -51.93 -0.31 -0.24 16 39 H 0.40 -2.11 7.88 -40.82 -0.32 -2.43 16 40 H 0.11 -0.59 6.33 -51.93 -0.33 -0.92 16 41 H 0.09 -0.38 8.14 -51.93 -0.42 -0.81 16 42 H 0.19 -0.93 6.73 -52.49 -0.35 -1.29 16 43 H 0.19 -0.38 8.06 -52.48 -0.42 -0.80 16 44 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 45 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 46 H 0.16 -0.89 7.74 -52.49 -0.41 -1.30 16 47 H 0.21 -1.29 8.06 -52.49 -0.42 -1.72 16 48 H 0.13 -0.11 6.30 -52.48 -0.33 -0.44 16 49 H 0.13 -0.08 4.86 -52.48 -0.26 -0.33 16 LS Contribution 416.30 15.07 6.27 6.27 Total: 0.00 -13.01 416.30 -8.76 -21.77 By element: Atomic # 1 Polarization: -10.17 SS G_CDS: -5.69 Total: -15.86 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: -4.47 Total: -3.83 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: 0.69 Total: 1.13 kcal Atomic # 8 Polarization: -3.52 SS G_CDS: -0.49 Total: -4.01 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: -5.07 Total: -5.47 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -13.01 -8.76 -21.77 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_4549634.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 112.933 kcal (2) G-P(sol) polarization free energy of solvation -13.010 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.755 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.765 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds