Wall clock time and date at job start Sun Mar 7 2021 09:46:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86306 * 109.46941 * 2 1 4 4 C 1.50697 * 109.47306 * 120.00061 * 2 1 3 5 5 C 1.38261 * 119.94581 * 65.00210 * 4 2 1 6 6 C 1.38146 * 120.05740 * 180.02562 * 5 4 2 7 7 C 1.38726 * 119.94396 * 359.97438 * 6 5 4 8 8 O 1.35900 * 120.05623 * 180.02562 * 7 6 5 9 9 C 1.42901 * 117.00145 * 180.02562 * 8 7 6 10 10 C 1.50696 * 109.47186 * 179.97438 * 9 8 7 11 11 C 1.36415 * 125.79962 * 89.99840 * 10 9 8 12 12 C 1.47380 * 127.19440 * 359.96571 * 11 10 9 13 13 O 1.21614 * 119.99787 * 359.97438 * 12 11 10 14 14 N 1.34780 * 119.99945 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99769 * 179.97438 * 14 12 11 16 16 H 1.08997 * 112.85099 * 336.19494 * 15 14 12 17 17 C 1.53779 * 113.69123 * 107.46801 * 15 14 12 18 18 C 1.53779 * 87.08402 * 89.12592 * 17 15 14 19 19 H 1.09002 * 113.61557 * 270.88569 * 18 17 15 20 20 N 1.46497 * 113.61581 * 139.98450 * 18 17 15 21 21 C 1.35311 * 125.86662 * 347.49716 * 20 18 17 22 22 C 1.35348 * 106.17691 * 180.02562 * 21 20 18 23 23 N 1.33767 * 106.49579 * 0.02562 * 22 21 20 24 24 N 1.28637 * 108.88721 * 359.73752 * 23 22 21 25 25 C 1.53784 * 87.08045 * 25.43458 * 18 17 15 26 26 C 1.47030 * 105.61671 * 180.22374 * 11 10 9 27 27 C 1.34180 * 105.94644 * 359.62933 * 26 11 10 28 28 O 1.33648 * 125.80481 * 269.99635 * 10 9 8 29 29 C 1.38736 * 119.88720 * 0.27825 * 7 6 5 30 30 C 1.38139 * 119.94598 * 359.47022 * 29 7 6 31 31 H 0.96704 * 114.00568 * 60.00254 * 1 2 3 32 32 H 1.08999 * 109.47190 * 240.00281 * 2 1 3 33 33 H 1.48498 * 109.99791 * 298.68095 * 3 2 1 34 34 H 1.48498 * 109.99828 * 59.99917 * 3 2 1 35 35 H 1.08000 * 119.97191 * 0.02562 * 5 4 2 36 36 H 1.07999 * 120.02830 * 180.02562 * 6 5 4 37 37 H 1.09003 * 109.47145 * 59.99474 * 9 8 7 38 38 H 1.09003 * 109.47042 * 299.99432 * 9 8 7 39 39 H 0.96998 * 119.99913 * 0.02562 * 14 12 11 40 40 H 1.09006 * 113.61280 * 203.67416 * 17 15 14 41 41 H 1.09007 * 113.61383 * 334.57384 * 17 15 14 42 42 H 1.08002 * 126.91500 * 0.02863 * 21 20 18 43 43 H 1.08005 * 126.75698 * 180.02562 * 22 21 20 44 44 H 1.09004 * 113.61451 * 220.02152 * 25 18 17 45 45 H 1.08994 * 113.61477 * 89.11454 * 25 18 17 46 46 H 1.07990 * 127.02505 * 179.73927 * 26 11 10 47 47 H 1.08000 * 125.43114 * 180.12048 * 27 26 11 48 48 H 1.08005 * 120.02549 * 179.71815 * 29 7 6 49 49 H 1.08003 * 119.97524 * 180.27387 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6841 -2.0605 1.3972 6 6 2.1431 -2.7139 2.5245 7 6 2.8531 -2.0144 3.4894 8 8 3.3061 -2.6550 4.5990 9 6 4.0292 -1.8717 5.5507 10 6 4.4481 -2.7447 6.7053 11 6 5.6156 -3.4448 6.7939 12 6 6.7000 -3.4985 5.7973 13 8 6.6038 -2.8716 4.7596 14 7 7.7983 -4.2423 6.0360 15 6 8.8760 -4.2961 5.0451 16 1 8.5352 -4.0645 4.0360 17 6 10.1378 -3.5222 5.4619 18 6 10.6174 -4.8206 6.1321 19 1 10.2925 -4.9233 7.1675 20 7 12.0486 -5.0783 5.9554 21 6 12.8699 -4.4337 5.0946 22 6 14.0953 -4.9844 5.2587 23 7 13.9654 -5.9268 6.1990 24 7 12.7419 -5.9540 6.5951 25 6 9.7273 -5.5740 5.1295 26 6 5.5632 -4.1396 8.0886 27 6 4.3944 -3.7902 8.6475 28 8 3.7390 -2.9647 7.8166 29 6 3.0953 -0.6586 3.3222 30 6 2.6387 -0.0109 2.1907 31 1 -0.3934 0.4417 -0.7651 32 1 1.7923 -0.5138 -0.8900 33 1 1.5877 2.4586 -1.2242 34 1 1.5613 2.4679 1.2085 35 1 1.1316 -2.6047 0.6455 36 1 1.9500 -3.7686 2.6541 37 1 3.3927 -1.0661 5.9168 38 1 4.9140 -1.4481 5.0753 39 1 7.8749 -4.7426 6.8635 40 1 10.7569 -3.2108 4.6205 41 1 9.9415 -2.7139 6.1663 42 1 12.6015 -3.6395 4.4136 43 1 15.0002 -4.7157 4.7337 44 1 9.1996 -6.4222 5.5657 45 1 10.2341 -5.8235 4.1974 46 1 6.3130 -4.7955 8.5054 47 1 4.0363 -4.1237 9.6102 48 1 3.6439 -0.1109 4.0742 49 1 2.8309 1.0436 2.0580 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567748_4549634.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:46:00 Heat of formation + Delta-G solvation = 87.129915 kcal Electronic energy + Delta-G solvation = -35594.162660 eV Core-core repulsion = 30687.211887 eV Total energy + Delta-G solvation = -4906.950773 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.152 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -44.25223 -43.72747 -41.31782 -41.24209 -39.49127 -39.13193 -37.38241 -35.27804 -34.22789 -33.20887 -32.78324 -32.00083 -31.96994 -31.48340 -28.09326 -27.06451 -26.86586 -26.12017 -24.77983 -23.82279 -23.56674 -22.98955 -22.36646 -22.14191 -21.13370 -20.46270 -19.49812 -19.31098 -18.77834 -18.53922 -17.63290 -17.36900 -17.24887 -17.16029 -16.90427 -16.79330 -16.66358 -16.07701 -15.91466 -15.83696 -15.69173 -15.50124 -15.33584 -15.00520 -14.64799 -14.49397 -14.30527 -14.02351 -13.94915 -13.83825 -13.80324 -13.71636 -13.51787 -13.36302 -13.03787 -12.73761 -12.50067 -12.34372 -12.23392 -12.03323 -11.89468 -11.73674 -11.63888 -11.20894 -10.99154 -10.96979 -10.47140 -10.35277 -10.27160 -10.05488 -9.84368 -9.24332 -4.92512 -0.04962 0.25595 0.29399 0.63878 1.02347 1.30929 1.42837 1.50638 1.59402 1.61712 1.93920 1.95235 2.07320 2.45683 2.59977 2.95054 3.16697 3.33130 3.43348 3.48117 3.58607 3.64866 3.67742 3.71094 3.73717 3.81485 3.92942 3.96271 4.11411 4.16833 4.26529 4.27830 4.32574 4.39890 4.44448 4.44818 4.45934 4.53159 4.55558 4.67012 4.72722 4.75985 4.80465 4.84223 4.87597 4.94592 5.14064 5.23859 5.24941 5.26587 5.36735 5.48159 5.67016 5.69926 5.88350 6.25133 6.36448 6.60715 7.05192 7.52327 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.081 4.081 3 Si 0.760 3.240 4 C -0.123 4.123 5 C -0.059 4.059 6 C -0.162 4.162 7 C 0.125 3.875 8 O -0.321 6.321 9 C 0.133 3.867 10 C 0.042 3.958 11 C -0.223 4.223 12 C 0.592 3.408 13 O -0.561 6.561 14 N -0.695 5.695 15 C 0.131 3.869 16 H 0.112 0.888 17 C -0.142 4.142 18 C 0.107 3.893 19 H 0.143 0.857 20 N -0.276 5.276 21 C -0.036 4.036 22 C -0.067 4.067 23 N -0.319 5.319 24 N -0.127 5.127 25 C -0.138 4.138 26 C -0.195 4.195 27 C -0.015 4.015 28 O -0.180 6.180 29 C -0.204 4.204 30 C -0.079 4.079 31 H 0.394 0.606 32 H 0.095 0.905 33 H -0.285 1.285 34 H -0.297 1.297 35 H 0.141 0.859 36 H 0.136 0.864 37 H 0.096 0.904 38 H 0.114 0.886 39 H 0.416 0.584 40 H 0.125 0.875 41 H 0.095 0.905 42 H 0.230 0.770 43 H 0.212 0.788 44 H 0.099 0.901 45 H 0.109 0.891 46 H 0.193 0.807 47 H 0.249 0.751 48 H 0.150 0.850 49 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.510 2.737 -0.313 2.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.189 4.189 3 Si 0.666 3.334 4 C -0.123 4.123 5 C -0.077 4.077 6 C -0.181 4.181 7 C 0.080 3.920 8 O -0.236 6.236 9 C 0.059 3.941 10 C -0.011 4.011 11 C -0.227 4.227 12 C 0.381 3.619 13 O -0.441 6.441 14 N -0.346 5.346 15 C 0.024 3.976 16 H 0.130 0.870 17 C -0.181 4.181 18 C 0.007 3.993 19 H 0.160 0.840 20 N -0.070 5.070 21 C -0.187 4.187 22 C -0.225 4.225 23 N -0.184 5.184 24 N -0.106 5.106 25 C -0.178 4.178 26 C -0.214 4.214 27 C -0.080 4.080 28 O -0.075 6.075 29 C -0.222 4.222 30 C -0.097 4.097 31 H 0.244 0.756 32 H 0.113 0.887 33 H -0.212 1.212 34 H -0.225 1.225 35 H 0.159 0.841 36 H 0.154 0.846 37 H 0.114 0.886 38 H 0.132 0.868 39 H 0.254 0.746 40 H 0.143 0.857 41 H 0.114 0.886 42 H 0.247 0.753 43 H 0.229 0.771 44 H 0.117 0.883 45 H 0.128 0.872 46 H 0.210 0.790 47 H 0.265 0.735 48 H 0.168 0.832 49 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 0.007 2.469 0.728 2.574 hybrid contribution -0.970 0.334 -0.614 1.196 sum -0.963 2.803 0.114 2.966 Atomic orbital electron populations 1.86551 1.18688 1.80664 1.51021 1.24942 0.83908 1.11726 0.98369 0.94173 0.90442 0.72337 0.76457 1.19418 1.01550 0.94412 0.96959 1.20967 0.96428 0.93922 0.96377 1.20625 1.02158 1.01191 0.94080 1.19136 0.94534 0.91629 0.86681 1.86047 1.69097 1.38822 1.29588 1.21181 0.98351 0.90695 0.83898 1.22075 0.90763 1.00236 0.88047 1.21340 0.97237 1.05398 0.98764 1.17300 0.81305 0.78555 0.84758 1.90796 1.80293 1.45411 1.27566 1.45335 1.17421 1.49258 1.22634 1.21568 0.85736 0.96076 0.94204 0.87024 1.23963 0.96353 0.95486 1.02326 1.23836 0.72509 0.99733 1.03251 0.83986 1.47757 1.11069 1.23288 1.24849 1.24234 0.90268 1.03831 1.00391 1.24234 1.00674 0.97134 1.00478 1.75088 1.09334 1.20357 1.13579 1.78259 0.99232 1.13110 1.19954 1.23788 0.95827 0.97987 1.00154 1.23262 1.00678 1.04340 0.93124 1.24890 0.92902 0.93005 0.97246 1.83800 1.44653 1.53832 1.25249 1.21387 1.06374 0.93384 1.01104 1.21001 0.96256 1.00010 0.92421 0.75559 0.88737 1.21214 1.22509 0.84127 0.84649 0.88576 0.86847 0.74628 0.85730 0.88630 0.75349 0.77103 0.88265 0.87226 0.78993 0.73528 0.83232 0.83738 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.76 12.81 -148.98 -1.91 -3.67 16 2 C -0.08 -0.04 2.79 71.23 0.20 0.16 16 3 Si 0.76 -1.03 29.85 68.60 2.05 1.02 16 4 C -0.12 -0.51 5.39 -19.85 -0.11 -0.61 16 5 C -0.06 -0.29 9.68 22.25 0.22 -0.07 16 6 C -0.16 -1.04 9.99 22.36 0.22 -0.82 16 7 C 0.13 0.88 6.69 22.51 0.15 1.03 16 8 O -0.32 -2.57 10.12 -92.42 -0.94 -3.50 16 9 C 0.13 0.42 4.74 71.23 0.34 0.76 16 10 C 0.04 0.13 7.00 25.26 0.18 0.30 16 11 C -0.22 -0.10 6.31 -18.99 -0.12 -0.22 16 12 C 0.59 0.64 7.81 86.65 0.68 1.32 16 13 O -0.56 -4.26 14.45 -4.07 -0.06 -4.32 16 14 N -0.69 4.49 5.26 -443.34 -2.33 2.16 16 15 C 0.13 -1.02 4.32 45.52 0.20 -0.82 16 16 H 0.11 -0.50 7.46 -2.39 -0.02 -0.52 16 17 C -0.14 1.45 7.23 31.12 0.22 1.68 16 18 C 0.11 -0.82 4.84 45.52 0.22 -0.60 16 19 H 0.14 -1.35 8.14 -2.39 -0.02 -1.37 16 20 N -0.28 0.11 3.53 -324.67 -1.15 -1.04 16 21 C -0.04 0.13 10.77 83.49 0.90 1.03 16 22 C -0.07 -0.12 12.05 83.73 1.01 0.88 16 23 N -0.32 -3.37 12.41 -58.26 -0.72 -4.09 16 24 N -0.13 -1.09 13.17 37.02 0.49 -0.60 16 25 C -0.14 1.23 7.63 31.12 0.24 1.47 16 26 C -0.20 1.18 10.60 23.65 0.25 1.43 16 27 C -0.01 0.08 12.03 66.89 0.80 0.89 16 28 O -0.18 -0.25 10.52 4.57 0.05 -0.20 16 29 C -0.20 -0.77 9.04 22.37 0.20 -0.57 16 30 C -0.08 -0.24 8.66 22.25 0.19 -0.05 16 31 H 0.39 -1.99 8.74 -74.05 -0.65 -2.64 16 32 H 0.09 -0.34 7.96 -2.39 -0.02 -0.36 16 33 H -0.29 -0.71 7.11 99.48 0.71 0.00 16 34 H -0.30 -1.66 7.05 99.48 0.70 -0.95 16 35 H 0.14 0.29 8.06 -2.91 -0.02 0.27 16 36 H 0.14 0.64 8.06 -2.91 -0.02 0.61 16 37 H 0.10 -0.06 7.65 -2.39 -0.02 -0.08 16 38 H 0.11 0.35 6.02 -2.39 -0.01 0.34 16 39 H 0.42 -4.84 7.88 -92.71 -0.73 -5.57 16 40 H 0.12 -1.65 6.33 -2.38 -0.02 -1.66 16 41 H 0.10 -0.93 8.14 -2.38 -0.02 -0.95 16 42 H 0.23 -2.94 6.73 -2.91 -0.02 -2.96 16 43 H 0.21 -0.95 8.06 -2.91 -0.02 -0.97 16 44 H 0.10 -0.94 8.14 -2.39 -0.02 -0.96 16 45 H 0.11 -0.92 8.14 -2.39 -0.02 -0.93 16 46 H 0.19 -2.56 7.74 -2.92 -0.02 -2.59 16 47 H 0.25 -3.49 8.06 -2.91 -0.02 -3.51 16 48 H 0.15 -0.13 6.30 -2.91 -0.02 -0.15 16 49 H 0.15 -0.16 4.86 -2.91 -0.01 -0.17 16 Total: 0.00 -33.35 416.30 1.17 -32.19 By element: Atomic # 1 Polarization: -24.84 SS G_CDS: -0.30 Total: -25.14 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: 5.99 Total: 7.19 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -3.72 Total: -3.57 kcal Atomic # 8 Polarization: -8.84 SS G_CDS: -2.85 Total: -11.69 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: 2.05 Total: 1.02 kcal Total: -33.35 1.17 -32.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_4549634.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.317 kcal (2) G-P(sol) polarization free energy of solvation -33.355 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.962 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.168 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.187 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.130 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds