Wall clock time and date at job start Sun Mar 7 2021 09:46:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50699 * 109.46603 * 119.99410 * 2 1 3 5 5 C 1.38251 * 119.97171 * 244.72845 * 4 2 1 6 6 C 1.38291 * 120.10949 * 179.72876 * 5 4 2 7 7 C 1.38120 * 120.05553 * 0.54736 * 6 5 4 8 8 C 1.38748 * 119.94543 * 359.72320 * 7 6 5 9 9 O 1.35905 * 120.05744 * 180.02562 * 8 7 6 10 10 C 1.42895 * 116.99779 * 359.97438 * 9 8 7 11 11 C 1.50699 * 109.47149 * 179.97438 * 10 9 8 12 12 O 1.21275 * 119.99841 * 0.02562 * 11 10 9 13 13 N 1.34780 * 120.00124 * 179.97438 * 11 10 9 14 14 C 1.46498 * 120.00055 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.84950 * 336.20561 * 14 13 11 16 16 C 1.53784 * 113.60973 * 107.50843 * 14 13 11 17 17 C 1.53777 * 87.08165 * 89.11668 * 16 14 13 18 18 H 1.08994 * 113.69330 * 270.87204 * 17 16 14 19 19 N 1.46499 * 113.61282 * 139.97870 * 17 16 14 20 20 C 1.35313 * 125.87172 * 347.50319 * 19 17 16 21 21 C 1.35352 * 106.17856 * 179.97438 * 20 19 17 22 22 N 1.33776 * 106.49331 * 0.02562 * 21 20 19 23 23 N 1.28635 * 108.88451 * 359.73229 * 22 21 20 24 24 C 1.53776 * 113.61492 * 205.00216 * 14 13 11 25 25 C 1.38170 * 119.97456 * 65.00150 * 4 2 1 26 26 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 27 27 H 1.08996 * 109.47455 * 239.99290 * 2 1 3 28 28 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 29 29 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 30 30 H 1.07997 * 119.94581 * 359.97438 * 5 4 2 31 31 H 1.08000 * 119.96851 * 180.29819 * 6 5 4 32 32 H 1.08000 * 120.02345 * 179.71079 * 7 6 5 33 33 H 1.09000 * 109.47413 * 300.00300 * 10 9 8 34 34 H 1.09006 * 109.47030 * 59.99852 * 10 9 8 35 35 H 0.97002 * 119.99760 * 0.02562 * 13 11 10 36 36 H 1.09001 * 113.61166 * 203.66945 * 16 14 13 37 37 H 1.09002 * 113.61381 * 334.56576 * 16 14 13 38 38 H 1.08002 * 126.90843 * 0.02562 * 20 19 17 39 39 H 1.07997 * 126.75094 * 179.97438 * 21 20 19 40 40 H 1.08996 * 113.61827 * 25.43871 * 24 14 13 41 41 H 1.09006 * 113.61445 * 156.33540 * 24 14 13 42 42 H 1.07998 * 120.02436 * 0.02584 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6435 -0.0127 2.1884 6 6 3.1008 -0.6604 3.3214 7 6 2.8567 -2.0089 3.4933 8 6 2.1470 -2.7126 2.5309 9 8 1.9051 -4.0394 2.6980 10 6 2.4114 -4.6462 3.8885 11 6 2.0485 -6.1088 3.9003 12 8 1.4187 -6.5847 2.9796 13 7 2.4247 -6.8882 4.9336 14 6 2.0714 -8.3099 4.9453 15 1 1.1992 -8.5344 4.3314 16 6 3.2658 -9.2435 4.6869 17 6 3.5007 -9.2346 6.2066 18 1 4.1542 -8.4303 6.5441 19 7 3.8801 -10.5414 6.7493 20 6 3.7993 -11.7245 6.0975 21 6 4.2488 -12.6633 6.9627 22 7 4.5778 -12.0171 8.0870 23 7 4.3525 -10.7609 7.9263 24 6 2.0038 -8.9162 6.3569 25 6 1.6844 -2.0594 1.3980 26 1 -0.3934 0.4417 0.7649 27 1 1.7924 -0.5139 -0.8899 28 1 3.5346 1.7703 0.0322 29 1 1.5616 2.4678 -1.2086 30 1 2.8396 1.0407 2.0535 31 1 3.6528 -0.1122 4.0705 32 1 3.2182 -2.5153 4.3762 33 1 3.4958 -4.5403 3.9175 34 1 1.9752 -4.1569 4.7595 35 1 2.9287 -6.5075 5.6698 36 1 2.9801 -10.2196 4.2948 37 1 4.0698 -8.7765 4.1180 38 1 3.4476 -11.8868 5.0893 39 1 4.3259 -13.7251 6.7814 40 1 1.7890 -8.1852 7.1363 41 1 1.3730 -9.8029 6.4215 42 1 1.1322 -2.6050 0.6471 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_4860298.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:46:21 Heat of formation + Delta-G solvation = 70.330558 kcal Electronic energy + Delta-G solvation = -26598.622235 eV Core-core repulsion = 22549.841220 eV Total energy + Delta-G solvation = -4048.781015 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.136 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -44.28572 -41.85366 -41.22547 -39.86895 -38.85887 -37.26348 -35.38099 -33.60236 -32.56288 -32.02415 -31.72644 -29.54741 -27.43278 -27.03099 -26.62774 -23.77377 -23.73396 -23.25606 -22.74888 -21.85434 -20.86558 -19.53203 -19.14911 -18.50448 -17.81908 -17.64699 -17.45609 -17.36019 -17.13077 -16.85919 -16.20445 -16.13233 -15.83576 -15.68442 -15.41459 -15.21439 -14.95147 -14.72706 -14.22488 -14.20629 -14.09402 -14.04279 -13.63507 -13.56156 -13.04342 -12.75308 -12.65194 -12.59801 -12.29024 -12.21724 -12.01501 -11.76894 -11.73833 -11.15340 -11.06544 -10.56233 -10.52091 -10.36916 -10.01957 -9.36663 -5.06671 0.11192 0.31064 0.57135 1.12674 1.21775 1.23933 1.27867 1.60871 1.64398 1.94082 2.31726 2.57862 2.62612 2.82842 3.11366 3.24488 3.32107 3.43078 3.48028 3.56092 3.61736 3.72888 3.77395 3.91520 3.95102 3.97642 4.07408 4.10117 4.17629 4.25855 4.27248 4.34592 4.39933 4.45462 4.47057 4.54412 4.70211 4.87939 5.02338 5.13607 5.18801 5.25923 5.35126 5.54653 5.55486 5.96884 6.21714 6.53883 6.81596 7.54518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.692 3.308 4 C -0.079 4.079 5 C -0.152 4.152 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.128 3.872 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.521 3.479 12 O -0.504 6.504 13 N -0.715 5.715 14 C 0.131 3.869 15 H 0.123 0.877 16 C -0.154 4.154 17 C 0.115 3.885 18 H 0.134 0.866 19 N -0.283 5.283 20 C -0.051 4.051 21 C -0.049 4.049 22 N -0.270 5.270 23 N -0.086 5.086 24 C -0.147 4.147 25 C -0.120 4.120 26 H 0.380 0.620 27 H 0.116 0.884 28 H -0.257 1.257 29 H -0.254 1.254 30 H 0.130 0.870 31 H 0.132 0.868 32 H 0.130 0.870 33 H 0.096 0.904 34 H 0.098 0.902 35 H 0.405 0.595 36 H 0.110 0.890 37 H 0.094 0.906 38 H 0.190 0.810 39 H 0.191 0.809 40 H 0.095 0.905 41 H 0.110 0.890 42 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.303 3.596 2.055 4.153 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.593 3.407 4 C -0.080 4.080 5 C -0.169 4.169 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.038 4.038 11 C 0.306 3.694 12 O -0.376 6.376 13 N -0.370 5.370 14 C 0.025 3.975 15 H 0.141 0.859 16 C -0.194 4.194 17 C 0.013 3.987 18 H 0.152 0.848 19 N -0.077 5.077 20 C -0.201 4.201 21 C -0.206 4.206 22 N -0.136 5.136 23 N -0.065 5.065 24 C -0.186 4.186 25 C -0.138 4.138 26 H 0.227 0.773 27 H 0.133 0.867 28 H -0.182 1.182 29 H -0.179 1.179 30 H 0.147 0.853 31 H 0.150 0.850 32 H 0.148 0.852 33 H 0.114 0.886 34 H 0.115 0.885 35 H 0.240 0.760 36 H 0.128 0.872 37 H 0.113 0.887 38 H 0.207 0.793 39 H 0.208 0.792 40 H 0.114 0.886 41 H 0.128 0.872 42 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.719 4.054 1.599 4.417 hybrid contribution 0.282 -0.938 -0.583 1.140 sum 1.002 3.116 1.016 3.427 Atomic orbital electron populations 1.86531 1.16830 1.81706 1.49207 1.25135 0.85453 1.10276 0.97280 0.94695 0.81009 0.77721 0.87231 1.20172 0.97680 0.93593 0.96551 1.20944 1.01302 0.99635 0.95052 1.20918 0.97544 0.93614 0.96984 1.21287 1.04721 0.96084 1.00364 1.19024 0.95529 0.82310 0.94860 1.86167 1.73787 1.20241 1.39898 1.22433 1.00808 0.91486 0.89078 1.20075 0.79476 0.87524 0.82308 1.90809 1.37477 1.74681 1.34661 1.45502 1.58722 1.08878 1.23866 1.21608 0.98723 0.79601 0.97605 0.85885 1.23977 1.00146 1.02257 0.93033 1.23516 0.97788 0.81993 0.95420 0.84816 1.47478 1.41199 1.08376 1.10599 1.23623 1.09144 0.85077 1.02292 1.23700 1.04550 1.01702 0.90655 1.75168 1.17716 0.97679 1.23050 1.78341 1.15012 1.12574 1.00597 1.23844 0.94210 1.02887 0.97688 1.20282 1.02775 0.93660 0.97127 0.77311 0.86702 1.18221 1.17902 0.85273 0.85006 0.85228 0.88580 0.88468 0.75986 0.87211 0.88729 0.79277 0.79166 0.88617 0.87205 0.84622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.22 12.83 -35.23 -0.45 -0.67 16 2 C -0.07 0.01 2.80 36.01 0.10 0.11 16 3 Si 0.69 -0.94 29.80 -169.99 -5.07 -6.01 16 4 C -0.08 -0.01 5.35 -104.64 -0.56 -0.57 16 5 C -0.15 0.18 8.67 -39.56 -0.34 -0.16 16 6 C -0.07 0.13 10.04 -39.60 -0.40 -0.27 16 7 C -0.21 0.28 9.04 -39.44 -0.36 -0.08 16 8 C 0.13 0.12 6.69 -39.22 -0.26 -0.14 16 9 O -0.29 -0.49 9.67 -39.35 -0.38 -0.87 16 10 C 0.04 -0.11 5.22 36.01 0.19 0.08 16 11 C 0.52 -0.50 7.91 -10.98 -0.09 -0.59 16 12 O -0.50 -2.10 16.10 -14.35 -0.23 -2.33 16 13 N -0.72 3.25 5.26 -53.02 -0.28 2.97 16 14 C 0.13 -0.55 4.32 -67.12 -0.29 -0.84 16 15 H 0.12 -0.31 7.46 -51.93 -0.39 -0.70 16 16 C -0.15 0.73 7.22 -25.92 -0.19 0.54 16 17 C 0.11 -0.44 4.84 -67.12 -0.32 -0.76 16 18 H 0.13 -0.67 8.14 -51.93 -0.42 -1.09 16 19 N -0.28 0.05 3.53 -53.97 -0.19 -0.14 16 20 C -0.05 0.06 10.78 -17.05 -0.18 -0.12 16 21 C -0.05 -0.04 12.05 -17.73 -0.21 -0.26 16 22 N -0.27 -1.25 12.41 30.24 0.38 -0.87 16 23 N -0.09 -0.32 13.16 60.35 0.79 0.48 16 24 C -0.15 0.69 7.62 -25.92 -0.20 0.49 16 25 C -0.12 -0.19 9.62 -39.43 -0.38 -0.57 16 26 H 0.38 -1.37 8.70 45.56 0.40 -0.97 16 27 H 0.12 0.04 7.96 -51.93 -0.41 -0.38 16 28 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 29 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 30 H 0.13 -0.41 4.90 -52.49 -0.26 -0.66 16 31 H 0.13 -0.53 8.06 -52.49 -0.42 -0.95 16 32 H 0.13 -0.54 6.30 -52.49 -0.33 -0.87 16 33 H 0.10 -0.50 7.66 -51.93 -0.40 -0.90 16 34 H 0.10 -0.51 7.66 -51.93 -0.40 -0.91 16 35 H 0.41 -3.08 8.70 -40.82 -0.36 -3.44 16 36 H 0.11 -0.60 6.33 -51.93 -0.33 -0.93 16 37 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 38 H 0.19 -0.94 6.73 -52.49 -0.35 -1.29 16 39 H 0.19 -0.39 8.06 -52.49 -0.42 -0.82 16 40 H 0.10 -0.50 8.14 -51.93 -0.42 -0.93 16 41 H 0.11 -0.46 8.14 -51.93 -0.42 -0.88 16 42 H 0.14 0.31 8.06 -52.49 -0.42 -0.12 16 LS Contribution 358.31 15.07 5.40 5.40 Total: 0.00 -13.28 358.31 -8.51 -21.79 By element: Atomic # 1 Polarization: -11.63 SS G_CDS: -4.98 Total: -16.61 kcal Atomic # 6 Polarization: 0.36 SS G_CDS: -3.49 Total: -3.13 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: 0.70 Total: 2.44 kcal Atomic # 8 Polarization: -2.81 SS G_CDS: -1.06 Total: -3.87 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.07 Total: -6.01 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -13.28 -8.51 -21.79 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_4860298.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.120 kcal (2) G-P(sol) polarization free energy of solvation -13.284 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.506 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.789 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds