Wall clock time and date at job start Sun Mar 7 2021 09:46:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.47259 * 2 1 4 4 C 1.50697 * 109.46996 * 120.00351 * 2 1 3 5 5 C 1.35456 * 125.56244 * 244.69337 * 4 2 1 6 6 C 1.39839 * 107.86687 * 179.90117 * 5 4 2 7 7 C 1.37875 * 107.08239 * 0.35243 * 6 5 4 8 8 C 1.46671 * 126.23236 * 179.78210 * 7 6 5 9 9 O 1.21695 * 120.00088 * 359.97438 * 8 7 6 10 10 N 1.34778 * 120.00251 * 180.02562 * 8 7 6 11 11 C 1.46501 * 120.00373 * 179.97438 * 10 8 7 12 12 H 1.08999 * 112.84632 * 336.20220 * 11 10 8 13 13 C 1.53779 * 113.60993 * 107.50348 * 11 10 8 14 14 C 1.53777 * 87.08090 * 89.11946 * 13 11 10 15 15 H 1.08998 * 113.61332 * 270.87877 * 14 13 11 16 16 N 1.46502 * 113.69185 * 139.99065 * 14 13 11 17 17 C 1.35313 * 125.86824 * 347.46455 * 16 14 13 18 18 C 1.35351 * 106.17722 * 180.02562 * 17 16 14 19 19 N 1.33775 * 106.49430 * 359.97438 * 18 17 16 20 20 N 1.28638 * 108.88490 * 359.73904 * 19 18 17 21 21 C 1.53773 * 113.61517 * 205.00176 * 11 10 8 22 22 N 1.35534 * 125.56749 * 64.99572 * 4 2 1 23 23 H 0.96696 * 114.00036 * 299.99991 * 1 2 3 24 24 H 1.09001 * 109.47103 * 239.99639 * 2 1 3 25 25 H 1.48497 * 109.99842 * 299.99834 * 3 2 1 26 26 H 1.48498 * 109.99736 * 61.31824 * 3 2 1 27 27 H 1.07997 * 126.06753 * 0.03471 * 5 4 2 28 28 H 1.07997 * 126.45854 * 180.10284 * 6 5 4 29 29 H 0.97003 * 119.99589 * 0.02562 * 10 8 7 30 30 H 1.09009 * 113.61556 * 203.66799 * 13 11 10 31 31 H 1.09003 * 113.61897 * 334.56853 * 13 11 10 32 32 H 1.08005 * 126.91137 * 359.97438 * 17 16 14 33 33 H 1.08001 * 126.75351 * 180.02562 * 18 17 16 34 34 H 1.08999 * 113.62211 * 25.43529 * 21 11 10 35 35 H 1.09005 * 113.61596 * 156.33848 * 21 11 10 36 36 H 0.97003 * 125.67806 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6380 -0.1407 2.2358 6 6 2.9088 -1.1313 3.1849 7 6 2.3540 -2.3034 2.7165 8 6 2.3950 -3.6091 3.3835 9 8 2.9597 -3.7276 4.4549 10 7 1.8081 -4.6779 2.8092 11 6 1.8495 -5.9822 3.4751 12 1 2.6848 -6.0768 4.1689 13 6 0.4990 -6.4123 4.0716 14 6 0.1922 -7.0577 2.7099 15 1 -0.2916 -6.3813 2.0053 16 7 -0.4847 -8.3529 2.8115 17 6 -0.6240 -9.0885 3.9387 18 6 -1.3068 -10.2010 3.5810 19 7 -1.5492 -10.0928 2.2699 20 7 -1.0544 -8.9840 1.8451 21 6 1.7127 -7.1713 2.5097 22 7 1.7548 -2.0251 1.5089 23 1 -0.3933 0.4417 0.7650 24 1 1.7924 -0.5139 -0.8900 25 1 1.5616 2.4678 -1.2085 26 1 1.5880 2.4585 1.2242 27 1 2.9372 0.8953 2.2950 28 1 3.4536 -1.0034 4.1085 29 1 1.3590 -4.5837 1.9546 30 1 0.5903 -7.1320 4.8853 31 1 -0.1565 -5.5764 4.3162 32 1 -0.2622 -8.8386 4.9252 33 1 -1.5992 -11.0155 4.2272 34 1 2.0371 -6.9482 1.4933 35 1 2.1359 -8.0985 2.8962 36 1 1.2845 -2.6636 0.9503 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567748_6580494.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:46:45 Heat of formation + Delta-G solvation = 113.741310 kcal Electronic energy + Delta-G solvation = -22212.222058 eV Core-core repulsion = 18702.343514 eV Total energy + Delta-G solvation = -3509.878543 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.117 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -44.29930 -42.56607 -41.15445 -39.40249 -37.82946 -35.34367 -33.57730 -32.12903 -32.00489 -31.31885 -27.50100 -27.12405 -26.33278 -23.88357 -23.49816 -22.83634 -21.64315 -21.23427 -20.63468 -19.97232 -18.93928 -18.15446 -17.42258 -17.19866 -16.71118 -16.43528 -16.09072 -15.99423 -15.63857 -15.30277 -15.18648 -14.91841 -14.56974 -14.38609 -13.99388 -13.90086 -13.76650 -13.68201 -13.36292 -12.78641 -12.41164 -12.34612 -12.09593 -11.90790 -11.69582 -11.44217 -11.04434 -10.84444 -10.43272 -10.38507 -10.08094 -9.31055 -4.83337 0.26279 0.59027 1.22143 1.37459 1.52936 1.57371 1.69037 1.80114 1.93105 2.20196 2.22136 2.88492 3.10130 3.34908 3.42893 3.58602 3.59224 3.63081 3.74840 4.12069 4.20841 4.25261 4.26982 4.30072 4.39007 4.47811 4.50190 4.63715 4.69697 4.75099 4.81243 4.96260 5.10239 5.20752 5.26468 5.56409 5.64751 5.78206 6.20741 6.39619 6.40210 6.95426 7.47602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.063 4.063 3 Si 0.793 3.207 4 C 0.033 3.967 5 C -0.206 4.206 6 C -0.115 4.115 7 C -0.064 4.064 8 C 0.597 3.403 9 O -0.561 6.561 10 N -0.705 5.705 11 C 0.131 3.869 12 H 0.115 0.885 13 C -0.144 4.144 14 C 0.106 3.894 15 H 0.140 0.860 16 N -0.276 5.276 17 C -0.036 4.036 18 C -0.066 4.066 19 N -0.318 5.318 20 N -0.128 5.128 21 C -0.136 4.136 22 N -0.512 5.512 23 H 0.390 0.610 24 H 0.135 0.865 25 H -0.301 1.301 26 H -0.282 1.282 27 H 0.165 0.835 28 H 0.147 0.853 29 H 0.410 0.590 30 H 0.126 0.874 31 H 0.092 0.908 32 H 0.230 0.770 33 H 0.213 0.787 34 H 0.100 0.900 35 H 0.111 0.889 36 H 0.428 0.572 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.050 3.125 0.856 4.450 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.172 4.172 3 Si 0.697 3.303 4 C -0.086 4.086 5 C -0.230 4.230 6 C -0.142 4.142 7 C -0.178 4.178 8 C 0.386 3.614 9 O -0.439 6.439 10 N -0.356 5.356 11 C 0.024 3.976 12 H 0.133 0.867 13 C -0.183 4.183 14 C 0.006 3.994 15 H 0.157 0.843 16 N -0.070 5.070 17 C -0.187 4.187 18 C -0.224 4.224 19 N -0.183 5.183 20 N -0.106 5.106 21 C -0.176 4.176 22 N -0.110 5.110 23 H 0.239 0.761 24 H 0.152 0.848 25 H -0.229 1.229 26 H -0.208 1.208 27 H 0.182 0.818 28 H 0.165 0.835 29 H 0.247 0.753 30 H 0.144 0.856 31 H 0.111 0.889 32 H 0.247 0.753 33 H 0.230 0.770 34 H 0.119 0.881 35 H 0.130 0.870 36 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges 2.893 3.404 -0.543 4.500 hybrid contribution -1.394 -0.510 0.978 1.778 sum 1.499 2.894 0.435 3.288 Atomic orbital electron populations 1.86587 1.18148 1.80498 1.50477 1.25044 0.83574 1.12121 0.96443 0.93307 0.90200 0.70263 0.76543 1.21225 1.03720 0.84261 0.99381 1.20954 1.06005 1.00949 0.95079 1.21505 1.01205 0.90942 1.00548 1.20269 1.10912 0.95389 0.91185 1.17121 0.77564 0.82719 0.83986 1.90867 1.45546 1.84874 1.22624 1.45456 1.57275 1.07959 1.24903 1.21586 0.99040 0.81362 0.95581 0.86716 1.23975 0.97305 1.01674 0.95365 1.23824 0.93260 0.79851 1.02498 0.84267 1.47744 1.35537 1.17315 1.06406 1.24245 1.05462 0.93609 0.95418 1.24242 1.03742 1.01773 0.92669 1.75092 1.19342 1.11000 1.12849 1.78259 1.12929 1.03211 1.16242 1.23785 0.92046 0.99348 1.02381 1.41900 1.42574 1.09545 1.16974 0.76057 0.84771 1.22922 1.20776 0.81774 0.83483 0.75338 0.85630 0.88889 0.75333 0.77043 0.88141 0.87019 0.73251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.78 12.88 -148.98 -1.92 -0.14 16 2 C -0.06 0.40 3.08 71.23 0.22 0.62 16 3 Si 0.79 -4.82 30.56 68.60 2.10 -2.72 16 4 C 0.03 -0.15 6.47 41.34 0.27 0.11 16 5 C -0.21 0.56 9.32 22.01 0.21 0.77 16 6 C -0.12 -0.11 10.65 22.57 0.24 0.13 16 7 C -0.06 0.04 7.06 40.35 0.28 0.33 16 8 C 0.60 0.41 7.79 86.44 0.67 1.08 16 9 O -0.56 -4.99 16.48 -4.33 -0.07 -5.06 16 10 N -0.70 4.98 5.26 -444.02 -2.33 2.64 16 11 C 0.13 -1.04 4.32 45.51 0.20 -0.84 16 12 H 0.11 -0.56 7.46 -2.39 -0.02 -0.58 16 13 C -0.14 1.40 7.23 31.12 0.22 1.63 16 14 C 0.11 -0.78 4.83 45.52 0.22 -0.56 16 15 H 0.14 -1.27 8.14 -2.39 -0.02 -1.29 16 16 N -0.28 0.03 3.53 -324.67 -1.15 -1.12 16 17 C -0.04 0.11 10.78 83.49 0.90 1.01 16 18 C -0.07 -0.14 12.05 83.73 1.01 0.87 16 19 N -0.32 -3.46 12.41 -58.25 -0.72 -4.18 16 20 N -0.13 -1.14 13.17 37.02 0.49 -0.65 16 21 C -0.14 1.26 7.62 31.12 0.24 1.50 16 22 N -0.51 2.90 5.99 -171.93 -1.03 1.87 16 23 H 0.39 -3.05 8.70 -74.06 -0.64 -3.69 16 24 H 0.13 -1.20 7.96 -2.39 -0.02 -1.22 16 25 H -0.30 -0.54 7.11 99.48 0.71 0.17 16 26 H -0.28 0.44 7.11 99.48 0.71 1.14 16 27 H 0.16 -1.02 6.19 -2.91 -0.02 -1.04 16 28 H 0.15 0.22 8.06 -2.91 -0.02 0.20 16 29 H 0.41 -5.09 7.83 -92.71 -0.73 -5.82 16 30 H 0.13 -1.60 6.34 -2.38 -0.02 -1.61 16 31 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 32 H 0.23 -2.86 6.74 -2.91 -0.02 -2.88 16 33 H 0.21 -0.90 8.06 -2.91 -0.02 -0.92 16 34 H 0.10 -1.02 8.14 -2.39 -0.02 -1.04 16 35 H 0.11 -0.98 8.14 -2.38 -0.02 -1.00 16 36 H 0.43 -4.64 8.19 -92.71 -0.76 -5.40 16 Total: 0.00 -27.65 313.78 -0.89 -28.55 By element: Atomic # 1 Polarization: -24.88 SS G_CDS: -0.93 Total: -25.81 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: 4.68 Total: 6.64 kcal Atomic # 7 Polarization: 3.31 SS G_CDS: -4.75 Total: -1.44 kcal Atomic # 8 Polarization: -3.21 SS G_CDS: -1.99 Total: -5.20 kcal Atomic # 14 Polarization: -4.82 SS G_CDS: 2.10 Total: -2.72 kcal Total: -27.65 -0.89 -28.55 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_6580494.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.286 kcal (2) G-P(sol) polarization free energy of solvation -27.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.635 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.893 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.545 kcal (6) G-S(sol) free energy of system = (1) + (5) 113.741 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds