Wall clock time and date at job start Sun Mar 7 2021 09:46:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38234 * 119.93774 * 300.00031 * 4 2 1 6 6 C 1.38191 * 120.07578 * 179.97438 * 5 4 2 7 7 C 1.38666 * 119.96008 * 0.03055 * 6 5 4 8 8 O 1.35922 * 120.06407 * 180.02562 * 7 6 5 9 9 C 1.42899 * 116.99705 * 0.02562 * 8 7 6 10 10 C 1.53004 * 109.47090 * 179.97438 * 9 8 7 11 11 N 1.46491 * 109.47261 * 179.97438 * 10 9 8 12 12 C 1.34817 * 126.59698 * 124.99877 * 11 10 9 13 13 C 1.36599 * 106.84091 * 179.97438 * 12 11 10 14 14 C 1.47519 * 125.76916 * 180.02562 * 13 12 11 15 15 O 1.21595 * 120.00143 * 0.02562 * 14 13 12 16 16 N 1.34776 * 119.99867 * 179.97438 * 14 13 12 17 17 C 1.46498 * 120.00057 * 180.02562 * 16 14 13 18 18 H 1.08997 * 112.85419 * 23.80650 * 17 16 14 19 19 C 1.53782 * 113.61649 * 155.00162 * 17 16 14 20 20 C 1.53780 * 87.08297 * 139.97805 * 19 17 16 21 21 H 1.08996 * 113.61846 * 219.93066 * 20 19 17 22 22 N 1.46502 * 113.61364 * 89.11600 * 20 19 17 23 23 C 1.35316 * 125.87070 * 275.00527 * 22 20 19 24 24 C 1.35343 * 106.17854 * 179.97438 * 23 22 20 25 25 N 1.33778 * 106.49693 * 359.97438 * 24 23 22 26 26 N 1.28634 * 108.88157 * 359.73987 * 25 24 23 27 27 C 1.53779 * 87.08246 * 334.56747 * 20 19 17 28 28 N 1.34398 * 108.45926 * 359.97438 * 13 12 11 29 29 N 1.28764 * 109.52206 * 359.75540 * 28 13 12 30 30 C 1.38864 * 119.87709 * 359.97438 * 7 6 5 31 31 Cl 1.73597 * 120.03684 * 180.02562 * 30 7 6 32 32 C 1.38214 * 119.92303 * 359.72413 * 30 7 6 33 33 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 34 34 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 35 35 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 36 36 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 37 37 H 1.08002 * 119.96206 * 359.97438 * 5 4 2 38 38 H 1.08000 * 120.02174 * 180.02562 * 6 5 4 39 39 H 1.09000 * 109.47151 * 299.99914 * 9 8 7 40 40 H 1.08995 * 109.47304 * 59.99861 * 9 8 7 41 41 H 1.09000 * 109.47081 * 299.99990 * 10 9 8 42 42 H 1.09003 * 109.47048 * 59.99527 * 10 9 8 43 43 H 1.07995 * 126.57899 * 359.94332 * 12 11 10 44 44 H 0.97005 * 120.00387 * 0.02562 * 16 14 13 45 45 H 1.09000 * 113.62004 * 254.52992 * 19 17 16 46 46 H 1.09005 * 113.61160 * 25.43303 * 19 17 16 47 47 H 1.08002 * 126.90700 * 0.02562 * 23 22 20 48 48 H 1.07995 * 126.75758 * 179.97438 * 24 23 22 49 49 H 1.09002 * 113.61477 * 270.88168 * 27 20 19 50 50 H 1.08997 * 113.61421 * 139.97404 * 27 20 19 51 51 H 1.07998 * 119.98034 * 180.30008 * 32 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5966 -2.0339 -1.4480 6 6 2.0552 -2.6879 -2.5756 7 6 2.8526 -2.0160 -3.4897 8 8 3.3045 -2.6571 -4.5997 9 6 2.9186 -4.0234 -4.7620 10 6 3.5170 -4.5718 -6.0590 11 7 3.1220 -5.9727 -6.2250 12 6 2.4978 -6.5107 -7.2921 13 6 2.3255 -7.8385 -7.0217 14 6 1.6839 -8.8237 -7.9128 15 8 1.2537 -8.4749 -8.9953 16 7 1.5755 -10.1106 -7.5274 17 6 0.9388 -11.0892 -8.4125 18 1 0.9691 -10.7940 -9.4613 19 6 1.4009 -12.5351 -8.1660 20 6 -0.0627 -12.9559 -8.3797 21 1 -0.3971 -13.7360 -7.6958 22 7 -0.3918 -13.2457 -9.7776 23 6 -0.7586 -12.3368 -10.7106 24 6 -0.9659 -13.0320 -11.8532 25 7 -0.7185 -14.3152 -11.5673 26 7 -0.3752 -14.4076 -10.3311 27 6 -0.4535 -11.5362 -7.9364 28 7 2.8402 -8.0958 -5.8072 29 7 3.3262 -7.0131 -5.3076 30 6 3.1879 -0.6866 -3.2693 31 17 4.1854 0.1588 -4.4112 32 6 2.7213 -0.0354 -2.1430 33 1 -0.3932 0.4418 0.7651 34 1 1.7924 -0.5139 0.8900 35 1 1.5615 2.4679 -1.2085 36 1 1.5881 2.4585 1.2242 37 1 0.9759 -2.5573 -0.7358 38 1 1.7928 -3.7218 -2.7449 39 1 3.2846 -4.6071 -3.9173 40 1 1.8317 -4.0912 -4.8066 41 1 3.1506 -3.9881 -6.9034 42 1 4.6040 -4.5040 -6.0148 43 1 2.1923 -5.9914 -8.1883 44 1 1.9190 -10.3890 -6.6640 45 1 2.0799 -12.9129 -8.9303 46 1 1.7623 -12.7112 -7.1528 47 1 -0.8637 -11.2710 -10.5716 48 1 -1.2709 -12.6299 -12.8080 49 1 -0.5990 -11.4393 -6.8605 50 1 -1.2713 -11.1076 -8.5155 51 1 2.9775 0.9999 -1.9732 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567748_7143556.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:46:56 Heat of formation + Delta-G solvation = 162.857133 kcal Electronic energy + Delta-G solvation = -38718.258159 eV Core-core repulsion = 33266.120593 eV Total energy + Delta-G solvation = -5452.137566 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 446.130 amu Computer time = 1.80 seconds Orbital eigenvalues (eV) -44.34672 -43.36135 -41.51037 -41.11768 -39.50675 -39.37482 -37.81615 -37.21172 -36.18346 -35.22535 -33.36314 -32.55754 -32.19508 -32.02079 -31.89462 -30.62315 -27.09429 -27.04849 -26.64000 -25.75537 -24.76300 -23.98947 -23.59874 -23.00427 -22.84096 -22.32644 -21.55756 -21.01939 -19.80247 -19.04485 -18.59515 -18.40090 -17.82794 -17.67149 -17.48161 -17.36503 -17.14659 -17.01363 -16.93213 -16.17837 -16.12428 -15.89809 -15.78859 -15.62798 -15.55249 -15.38001 -15.02468 -14.89313 -14.75140 -14.59890 -14.10475 -14.01696 -13.80508 -13.79581 -13.64328 -13.54313 -13.51931 -13.20480 -12.74981 -12.66829 -12.59507 -12.42828 -12.35789 -12.33474 -12.00437 -11.99506 -11.92391 -11.81679 -11.76615 -11.49362 -11.35126 -11.02487 -10.53863 -10.52188 -10.38725 -10.14676 -10.06720 -9.32527 -4.96299 -0.01730 0.01559 0.03196 0.51488 0.58465 0.71569 1.06620 1.25970 1.33539 1.55897 1.57314 1.91959 1.93937 2.01977 2.12955 2.35077 2.91707 3.08557 3.18374 3.20913 3.28596 3.46814 3.49527 3.61451 3.66289 3.68336 3.74733 3.78273 3.83088 3.87542 3.97233 4.05015 4.06879 4.11213 4.23152 4.26824 4.28166 4.37491 4.37602 4.43571 4.46397 4.55470 4.62448 4.65273 4.68588 4.75578 4.77597 4.82910 4.91492 5.00183 5.21792 5.23800 5.28470 5.32525 5.41536 5.67593 5.99900 6.31042 6.56743 6.78958 7.03824 7.47681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.072 4.072 3 Si 0.741 3.259 4 C -0.105 4.105 5 C -0.049 4.049 6 C -0.193 4.193 7 C 0.138 3.862 8 O -0.304 6.304 9 C 0.046 3.954 10 C 0.123 3.877 11 N -0.351 5.351 12 C 0.118 3.882 13 C -0.124 4.124 14 C 0.610 3.390 15 O -0.562 6.562 16 N -0.694 5.694 17 C 0.116 3.884 18 H 0.108 0.892 19 C -0.138 4.138 20 C 0.105 3.895 21 H 0.145 0.855 22 N -0.270 5.270 23 C -0.039 4.039 24 C -0.063 4.063 25 N -0.315 5.315 26 N -0.119 5.119 27 C -0.138 4.138 28 N -0.213 5.213 29 N -0.083 5.083 30 C -0.076 4.076 31 Cl -0.056 7.056 32 C -0.075 4.075 33 H 0.397 0.603 34 H 0.105 0.895 35 H -0.299 1.299 36 H -0.281 1.281 37 H 0.148 0.852 38 H 0.156 0.844 39 H 0.083 0.917 40 H 0.080 0.920 41 H 0.149 0.851 42 H 0.124 0.876 43 H 0.237 0.763 44 H 0.420 0.580 45 H 0.073 0.927 46 H 0.142 0.858 47 H 0.219 0.781 48 H 0.213 0.787 49 H 0.138 0.862 50 H 0.091 0.909 51 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.320 5.689 6.987 9.106 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.182 4.182 3 Si 0.647 3.353 4 C -0.106 4.106 5 C -0.068 4.068 6 C -0.212 4.212 7 C 0.091 3.909 8 O -0.216 6.216 9 C -0.030 4.030 10 C 0.003 3.997 11 N -0.136 5.136 12 C -0.039 4.039 13 C -0.264 4.264 14 C 0.395 3.605 15 O -0.440 6.440 16 N -0.345 5.345 17 C 0.011 3.989 18 H 0.126 0.874 19 C -0.177 4.177 20 C 0.003 3.997 21 H 0.163 0.837 22 N -0.064 5.064 23 C -0.190 4.190 24 C -0.221 4.221 25 N -0.180 5.180 26 N -0.098 5.098 27 C -0.177 4.177 28 N -0.087 5.087 29 N -0.063 5.063 30 C -0.104 4.104 31 Cl -0.027 7.027 32 C -0.094 4.094 33 H 0.248 0.752 34 H 0.123 0.877 35 H -0.226 1.226 36 H -0.208 1.208 37 H 0.165 0.835 38 H 0.174 0.826 39 H 0.101 0.899 40 H 0.099 0.901 41 H 0.167 0.833 42 H 0.142 0.858 43 H 0.253 0.747 44 H 0.258 0.742 45 H 0.092 0.908 46 H 0.160 0.840 47 H 0.236 0.764 48 H 0.230 0.770 49 H 0.156 0.844 50 H 0.110 0.890 51 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.974 4.740 7.032 8.707 hybrid contribution -1.488 1.255 -0.336 1.976 sum 0.486 5.995 6.696 9.001 Atomic orbital electron populations 1.86529 1.18232 1.80604 1.51280 1.24762 0.84205 1.10906 0.98299 0.94375 0.90762 0.73251 0.76916 1.19294 0.99895 0.94779 0.96619 1.21121 0.95838 0.93473 0.96327 1.21462 1.01897 1.01999 0.95844 1.18646 0.94553 0.90388 0.87273 1.85994 1.70554 1.25670 1.39414 1.22973 1.00879 0.80276 0.98836 1.21910 1.03794 0.73847 1.00134 1.50340 1.39646 1.10479 1.13136 1.23935 0.92321 0.93713 0.93971 1.21468 1.14020 0.94989 0.95891 1.16857 0.77384 0.82066 0.84185 1.90827 1.50469 1.79929 1.22804 1.45619 1.59871 1.07022 1.21982 1.22746 0.93084 0.87238 0.95816 0.87450 1.23810 0.94348 0.93509 1.06023 1.22633 0.99161 1.01393 0.76485 0.83736 1.47454 1.42294 1.05196 1.11476 1.24139 1.06194 0.99815 0.88825 1.24198 1.06685 0.89340 1.01840 1.75104 1.16069 1.20941 1.05859 1.78271 1.20997 1.06877 1.03645 1.23948 0.97929 0.90464 1.05399 1.74608 1.07111 1.19647 1.07352 1.82011 1.21811 0.89122 1.13344 1.20148 1.03481 0.91245 0.95495 1.98385 1.67791 1.76930 1.59564 1.20850 0.96904 1.00132 0.91469 0.75215 0.87740 1.22633 1.20759 0.83473 0.82639 0.89903 0.90137 0.83317 0.85837 0.74700 0.74236 0.90825 0.84018 0.76398 0.77029 0.84380 0.89016 0.83218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.61 12.74 -148.98 -1.90 -1.29 16 2 C -0.07 0.26 2.81 71.24 0.20 0.46 16 3 Si 0.74 -2.41 29.78 68.60 2.04 -0.37 16 4 C -0.11 0.08 5.42 -19.85 -0.11 -0.03 16 5 C -0.05 0.09 9.60 22.26 0.21 0.30 16 6 C -0.19 0.50 9.04 22.36 0.20 0.70 16 7 C 0.14 -0.04 6.68 22.52 0.15 0.11 16 8 O -0.30 0.83 9.60 -92.67 -0.89 -0.06 16 9 C 0.05 -0.36 4.95 71.98 0.36 0.00 16 10 C 0.12 -1.32 6.91 86.38 0.60 -0.72 16 11 N -0.35 2.00 3.69 -347.11 -1.28 0.72 16 12 C 0.12 -0.68 11.27 83.85 0.95 0.27 16 13 C -0.12 0.13 6.99 40.82 0.29 0.42 16 14 C 0.61 0.03 7.82 86.69 0.68 0.71 16 15 O -0.56 -2.93 16.46 -4.02 -0.07 -3.00 16 16 N -0.69 3.46 5.35 -443.21 -2.37 1.09 16 17 C 0.12 -0.72 3.82 45.52 0.17 -0.55 16 18 H 0.11 -0.27 6.30 -2.39 -0.02 -0.29 16 19 C -0.14 1.08 7.63 31.12 0.24 1.31 16 20 C 0.11 -0.64 5.11 45.52 0.23 -0.41 16 21 H 0.14 -1.21 8.14 -2.39 -0.02 -1.23 16 22 N -0.27 -0.51 3.52 -324.67 -1.14 -1.65 16 23 C -0.04 0.00 9.68 83.49 0.81 0.81 16 24 C -0.06 -0.27 12.05 83.73 1.01 0.74 16 25 N -0.31 -3.86 12.41 -58.26 -0.72 -4.58 16 26 N -0.12 -1.23 13.16 37.02 0.49 -0.74 16 27 C -0.14 1.30 7.13 31.12 0.22 1.53 16 28 N -0.21 -0.23 12.04 -50.00 -0.60 -0.84 16 29 N -0.08 -0.04 13.65 37.02 0.51 0.46 16 30 C -0.08 -0.12 6.33 22.41 0.14 0.02 16 31 Cl -0.06 -0.12 28.51 -2.72 -0.08 -0.20 16 32 C -0.08 -0.01 8.45 22.28 0.19 0.18 16 33 H 0.40 -3.47 8.74 -74.05 -0.65 -4.12 16 34 H 0.10 -0.86 7.96 -2.38 -0.02 -0.88 16 35 H -0.30 -1.37 7.11 99.48 0.71 -0.66 16 36 H -0.28 -0.18 7.11 99.48 0.71 0.52 16 37 H 0.15 -0.66 8.06 -2.91 -0.02 -0.68 16 38 H 0.16 -1.02 6.30 -2.91 -0.02 -1.04 16 39 H 0.08 -0.58 7.66 -2.39 -0.02 -0.60 16 40 H 0.08 -0.71 7.66 -2.39 -0.02 -0.72 16 41 H 0.15 -2.35 8.08 -2.39 -0.02 -2.37 16 42 H 0.12 -1.42 8.14 -2.39 -0.02 -1.44 16 43 H 0.24 -2.87 8.06 -2.91 -0.02 -2.89 16 44 H 0.42 -3.29 8.41 -92.70 -0.78 -4.07 16 45 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 46 H 0.14 -1.82 8.12 -2.38 -0.02 -1.84 16 47 H 0.22 -1.49 6.74 -2.91 -0.02 -1.51 16 48 H 0.21 -0.46 8.06 -2.91 -0.02 -0.48 16 49 H 0.14 -1.81 8.14 -2.39 -0.02 -1.83 16 50 H 0.09 -0.81 6.98 -2.39 -0.02 -0.82 16 51 H 0.15 -0.34 4.87 -2.91 -0.01 -0.35 16 Total: 0.00 -32.37 451.41 0.18 -32.20 By element: Atomic # 1 Polarization: -27.26 SS G_CDS: -0.34 Total: -27.60 kcal Atomic # 6 Polarization: -0.68 SS G_CDS: 6.53 Total: 5.85 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -5.13 Total: -5.54 kcal Atomic # 8 Polarization: -1.49 SS G_CDS: -2.85 Total: -4.35 kcal Atomic # 14 Polarization: -2.41 SS G_CDS: 2.04 Total: -0.37 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -0.08 Total: -0.20 kcal Total: -32.37 0.18 -32.20 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_7143556.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 195.052 kcal (2) G-P(sol) polarization free energy of solvation -32.374 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 162.679 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.178 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.195 kcal (6) G-S(sol) free energy of system = (1) + (5) 162.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.80 seconds