Wall clock time and date at job start Sun Mar 7 2021 09:47:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86301 * 109.47193 * 2 1 4 4 C 1.50706 * 109.47490 * 120.00224 * 2 1 3 5 5 C 1.34232 * 126.49997 * 255.31236 * 4 2 1 6 6 N 1.36827 * 109.93770 * 180.13328 * 5 4 2 7 7 C 1.46501 * 125.06471 * 179.85756 * 6 5 4 8 8 C 1.50698 * 109.46873 * 264.69486 * 7 6 5 9 9 O 1.21280 * 120.00213 * 359.97438 * 8 7 6 10 10 N 1.34779 * 120.00090 * 180.02562 * 8 7 6 11 11 C 1.46503 * 120.00174 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.84751 * 336.18919 * 11 10 8 13 13 C 1.53779 * 113.61557 * 107.49471 * 11 10 8 14 14 C 1.53787 * 87.07697 * 139.98153 * 13 11 10 15 15 H 1.09003 * 113.69102 * 220.00996 * 14 13 11 16 16 N 1.46496 * 113.61398 * 89.11964 * 14 13 11 17 17 C 1.35314 * 125.86616 * 347.49992 * 16 14 13 18 18 C 1.35358 * 106.17498 * 180.02562 * 17 16 14 19 19 N 1.33767 * 106.49287 * 0.26477 * 18 17 16 20 20 N 1.28632 * 108.88855 * 359.56308 * 19 18 17 21 21 C 1.53775 * 87.08404 * 334.56997 * 14 13 11 22 22 C 1.37693 * 109.87458 * 359.58836 * 6 5 4 23 23 C 1.39090 * 133.51434 * 180.26690 * 22 6 5 24 24 C 1.37793 * 119.77584 * 179.97438 * 23 22 6 25 25 C 1.38795 * 120.66740 * 359.97438 * 24 23 22 26 26 C 1.36658 * 120.52543 * 0.02562 * 25 24 23 27 27 C 1.39592 * 119.76543 * 359.97438 * 26 25 24 28 28 H 0.96696 * 114.00183 * 59.99628 * 1 2 3 29 29 H 1.09004 * 109.47390 * 240.00083 * 2 1 3 30 30 H 1.48500 * 109.99700 * 60.00091 * 3 2 1 31 31 H 1.48502 * 110.00334 * 181.32022 * 3 2 1 32 32 H 1.08004 * 125.03144 * 359.97438 * 5 4 2 33 33 H 1.08997 * 109.47725 * 144.69588 * 7 6 5 34 34 H 1.08996 * 109.46933 * 24.69005 * 7 6 5 35 35 H 0.97001 * 119.99954 * 359.97438 * 10 8 7 36 36 H 1.09003 * 113.61534 * 25.43993 * 13 11 10 37 37 H 1.08990 * 113.62028 * 254.52775 * 13 11 10 38 38 H 1.08004 * 126.91628 * 0.06220 * 17 16 14 39 39 H 1.08002 * 126.74926 * 179.97438 * 18 17 16 40 40 H 1.09002 * 113.61798 * 139.98111 * 21 14 13 41 41 H 1.08999 * 113.61525 * 270.88495 * 21 14 13 42 42 H 1.07996 * 120.11273 * 359.95001 * 23 22 6 43 43 H 1.07993 * 119.66262 * 180.02562 * 24 23 22 44 44 H 1.07994 * 119.73349 * 179.97438 * 25 24 23 45 45 H 1.08002 * 120.11764 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4555 -0.1373 2.3253 6 7 2.8023 -1.0990 3.2347 7 6 3.4061 -0.8404 4.5442 8 6 4.9044 -0.9628 4.4394 9 8 5.4174 -1.2394 3.3758 10 7 5.6745 -0.7660 5.5279 11 6 7.1311 -0.8845 5.4259 12 1 7.4474 -1.5113 4.5921 13 6 7.8655 0.4647 5.4981 14 6 8.9206 -0.2453 6.3628 15 1 9.2826 0.3580 7.1954 16 7 10.0047 -0.8514 5.5859 17 6 10.0125 -1.0357 4.2454 18 6 11.1961 -1.6233 3.9524 19 7 11.8435 -1.7731 5.1134 20 7 11.1133 -1.3007 6.0612 21 6 7.8151 -1.2389 6.7568 22 6 2.4936 -2.3457 2.7384 23 6 2.6282 -3.6362 3.2395 24 6 2.2143 -4.7108 2.4826 25 6 1.6630 -4.5193 1.2234 26 6 1.5215 -3.2600 0.7118 27 6 1.9341 -2.1571 1.4613 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5615 2.4678 1.2085 31 1 3.5346 1.7704 -0.0322 32 1 2.5867 0.9254 2.4663 33 1 3.0320 -1.5658 5.2666 34 1 3.1459 0.1661 4.8719 35 1 5.2643 -0.5452 6.3787 36 1 7.3105 1.2359 6.0321 37 1 8.2473 0.8060 4.5360 38 1 9.2316 -0.7674 3.5492 39 1 11.5467 -1.9179 2.9743 40 1 8.1562 -2.2727 6.8109 41 1 7.2462 -0.9334 7.6350 42 1 3.0559 -3.7956 4.2182 43 1 2.3193 -5.7120 2.8736 44 1 1.3440 -5.3723 0.6429 45 1 1.0912 -3.1186 -0.2687 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_9818708.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:47:06 Heat of formation + Delta-G solvation = 149.767151 kcal Electronic energy + Delta-G solvation = -30678.558500 eV Core-core repulsion = 26474.488495 eV Total energy + Delta-G solvation = -4204.070005 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -44.35871 -42.58559 -41.40677 -39.80369 -38.01153 -37.56003 -35.47206 -34.27244 -33.40154 -32.00849 -31.44235 -30.24834 -29.22533 -27.46743 -26.91897 -25.57273 -23.83462 -23.60722 -23.36330 -22.61400 -21.91273 -21.19884 -20.50684 -18.88631 -18.71633 -18.25885 -18.21882 -17.80438 -17.63099 -17.02768 -16.56644 -16.41987 -16.31459 -15.84841 -15.61551 -15.45983 -15.05109 -14.89618 -14.87297 -14.67169 -14.55763 -14.17957 -14.08071 -14.06369 -13.84412 -13.54943 -13.50659 -12.74337 -12.70530 -12.60140 -12.52926 -12.40047 -12.21285 -11.95493 -11.86421 -11.71325 -11.31166 -11.08623 -10.53882 -10.50700 -10.36663 -10.16216 -9.10164 -8.61495 -5.00980 0.19952 0.54975 0.71844 1.14290 1.15610 1.29075 1.31731 1.52321 1.64123 1.69461 1.93044 1.98135 2.56726 2.81749 3.02549 3.08972 3.27440 3.36101 3.39245 3.52958 3.58362 3.67739 3.69975 3.76909 3.87629 3.95651 4.03041 4.03711 4.10323 4.23219 4.26135 4.29807 4.30066 4.36850 4.39983 4.51292 4.64168 4.69476 4.70980 4.83302 4.92306 4.97005 5.18604 5.18831 5.54857 5.57626 5.72588 5.78048 5.82300 5.93782 6.17461 6.28256 6.75513 6.76836 7.53318 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.033 4.033 3 Si 0.682 3.318 4 C -0.148 4.148 5 C 0.063 3.937 6 N -0.467 5.467 7 C 0.092 3.908 8 C 0.493 3.507 9 O -0.510 6.510 10 N -0.718 5.718 11 C 0.121 3.879 12 H 0.121 0.879 13 C -0.154 4.154 14 C 0.118 3.882 15 H 0.133 0.867 16 N -0.278 5.278 17 C -0.051 4.051 18 C -0.046 4.046 19 N -0.267 5.267 20 N -0.081 5.081 21 C -0.148 4.148 22 C 0.109 3.891 23 C -0.128 4.128 24 C -0.095 4.095 25 C -0.145 4.145 26 C -0.063 4.063 27 C -0.086 4.086 28 H 0.378 0.622 29 H 0.071 0.929 30 H -0.254 1.254 31 H -0.256 1.256 32 H 0.162 0.838 33 H 0.121 0.879 34 H 0.123 0.877 35 H 0.406 0.594 36 H 0.117 0.883 37 H 0.090 0.910 38 H 0.189 0.811 39 H 0.192 0.808 40 H 0.090 0.910 41 H 0.116 0.884 42 H 0.115 0.885 43 H 0.126 0.874 44 H 0.125 0.875 45 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.344 4.368 1.169 7.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.144 4.144 3 Si 0.583 3.417 4 C -0.155 4.155 5 C -0.062 4.062 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.277 3.723 9 O -0.383 6.383 10 N -0.371 5.371 11 C 0.015 3.985 12 H 0.139 0.861 13 C -0.194 4.194 14 C 0.014 3.986 15 H 0.151 0.849 16 N -0.072 5.072 17 C -0.201 4.201 18 C -0.203 4.203 19 N -0.133 5.133 20 N -0.060 5.060 21 C -0.187 4.187 22 C 0.005 3.995 23 C -0.149 4.149 24 C -0.114 4.114 25 C -0.164 4.164 26 C -0.081 4.081 27 C -0.090 4.090 28 H 0.225 0.775 29 H 0.089 0.911 30 H -0.179 1.179 31 H -0.180 1.180 32 H 0.179 0.821 33 H 0.139 0.861 34 H 0.141 0.859 35 H 0.241 0.759 36 H 0.135 0.865 37 H 0.108 0.892 38 H 0.206 0.794 39 H 0.209 0.791 40 H 0.109 0.891 41 H 0.134 0.866 42 H 0.133 0.867 43 H 0.144 0.856 44 H 0.143 0.857 45 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -3.418 4.306 2.930 6.230 hybrid contribution -0.729 -0.115 -0.231 0.774 sum -4.147 4.190 2.699 6.484 Atomic orbital electron populations 1.86537 1.17638 1.81734 1.49341 1.23948 0.85165 1.09090 0.96236 0.95278 0.80946 0.77706 0.87762 1.19550 1.08569 0.91726 0.95685 1.21406 1.01880 0.93579 0.89297 1.43142 1.52776 1.04660 1.14431 1.21588 0.90457 1.06005 0.85398 1.21127 0.89659 0.77027 0.84465 1.90816 1.74578 1.45201 1.27733 1.45866 1.06442 1.72500 1.12311 1.22708 0.79295 0.97017 0.99464 0.86109 1.23960 0.95416 0.98438 1.01564 1.22262 0.84400 0.96255 0.95642 0.84935 1.47145 1.13958 1.39852 1.06282 1.23684 1.02911 1.07577 0.85970 1.23696 0.93006 1.04259 0.99364 1.75175 1.24057 1.16618 0.97485 1.78367 0.91874 1.13390 1.22398 1.23796 0.95366 1.01185 0.98350 1.18161 1.01275 0.85788 0.94283 1.19948 1.05129 0.89139 1.00643 1.20844 0.98148 0.97949 0.94462 1.20684 1.02336 0.96933 0.96410 1.20294 0.97813 0.90837 0.99189 1.18929 1.03425 0.92603 0.94005 0.77462 0.91141 1.17904 1.18044 0.82066 0.86112 0.85937 0.75907 0.86521 0.89168 0.79362 0.79069 0.89137 0.86597 0.86711 0.85590 0.85740 0.85822 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.61 12.86 -35.23 -0.45 -1.06 16 2 C -0.03 -0.04 3.05 36.01 0.11 0.07 16 3 Si 0.68 -0.49 30.80 -169.99 -5.24 -5.73 16 4 C -0.15 -0.58 5.61 -102.71 -0.58 -1.15 16 5 C 0.06 0.17 9.89 -16.73 -0.17 0.01 16 6 N -0.47 -0.96 2.27 -115.71 -0.26 -1.22 16 7 C 0.09 -0.23 6.48 -5.19 -0.03 -0.26 16 8 C 0.49 -0.42 7.90 -10.99 -0.09 -0.51 16 9 O -0.51 -2.15 16.02 5.56 0.09 -2.06 16 10 N -0.72 3.10 5.35 -53.02 -0.28 2.82 16 11 C 0.12 -0.41 3.82 -67.12 -0.26 -0.67 16 12 H 0.12 -0.10 6.30 -51.93 -0.33 -0.43 16 13 C -0.15 0.69 7.13 -25.92 -0.18 0.50 16 14 C 0.12 -0.37 5.11 -67.12 -0.34 -0.71 16 15 H 0.13 -0.56 8.14 -51.93 -0.42 -0.98 16 16 N -0.28 -0.22 3.52 -53.97 -0.19 -0.41 16 17 C -0.05 -0.02 9.68 -17.04 -0.17 -0.18 16 18 C -0.05 -0.10 12.05 -17.74 -0.21 -0.31 16 19 N -0.27 -1.44 12.41 30.24 0.38 -1.06 16 20 N -0.08 -0.36 13.16 60.35 0.79 0.43 16 21 C -0.15 0.65 7.63 -25.92 -0.20 0.45 16 22 C 0.11 0.43 6.80 -83.99 -0.57 -0.14 16 23 C -0.13 -0.34 10.00 -39.43 -0.39 -0.73 16 24 C -0.09 -0.21 10.01 -39.54 -0.40 -0.60 16 25 C -0.14 -0.36 9.97 -39.95 -0.40 -0.76 16 26 C -0.06 -0.23 10.05 -39.65 -0.40 -0.63 16 27 C -0.09 -0.41 6.35 -105.14 -0.67 -1.08 16 28 H 0.38 -1.56 8.74 45.56 0.40 -1.16 16 29 H 0.07 0.01 7.96 -51.93 -0.41 -0.41 16 30 H -0.25 -0.36 7.04 56.52 0.40 0.03 16 31 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 32 H 0.16 0.13 6.30 -52.48 -0.33 -0.20 16 33 H 0.12 -0.57 8.14 -51.93 -0.42 -1.00 16 34 H 0.12 -0.68 8.11 -51.93 -0.42 -1.10 16 35 H 0.41 -3.12 8.73 -40.82 -0.36 -3.47 16 36 H 0.12 -0.74 8.14 -51.93 -0.42 -1.16 16 37 H 0.09 -0.31 6.98 -51.93 -0.36 -0.67 16 38 H 0.19 -0.41 6.74 -52.48 -0.35 -0.76 16 39 H 0.19 -0.16 8.06 -52.49 -0.42 -0.58 16 40 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 41 H 0.12 -0.81 8.12 -51.93 -0.42 -1.23 16 42 H 0.11 0.06 8.06 -52.49 -0.42 -0.36 16 43 H 0.13 -0.02 8.06 -52.49 -0.42 -0.44 16 44 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 45 H 0.12 0.27 8.06 -52.49 -0.42 -0.15 16 LS Contribution 382.92 15.07 5.77 5.77 Total: 0.00 -14.56 382.92 -9.93 -24.49 By element: Atomic # 1 Polarization: -9.69 SS G_CDS: -5.60 Total: -15.28 kcal Atomic # 6 Polarization: -1.75 SS G_CDS: -4.94 Total: -6.69 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: 0.43 Total: 0.56 kcal Atomic # 8 Polarization: -2.76 SS G_CDS: -0.36 Total: -3.12 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.24 Total: -5.73 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -14.56 -9.93 -24.49 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_9818708.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 174.253 kcal (2) G-P(sol) polarization free energy of solvation -14.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 159.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.930 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.486 kcal (6) G-S(sol) free energy of system = (1) + (5) 149.767 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds