Wall clock time and date at job start Sun Mar 7 2021 10:36:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38980 * 119.95509 * 2 1 4 4 O 1.35711 * 119.90684 * 0.02562 * 3 2 1 5 5 C 1.39012 * 120.17856 * 180.02562 * 3 2 1 6 6 C 1.50697 * 119.95415 * 180.28043 * 5 3 2 7 7 O 1.42897 * 109.47239 * 284.71679 * 6 5 3 8 8 Si 1.86307 * 109.46754 * 164.72405 * 6 5 3 9 9 C 1.37685 * 120.08641 * 0.02562 * 5 3 2 10 10 C 1.39746 * 119.91279 * 0.02562 * 9 5 3 11 11 C 1.47602 * 120.08937 * 179.97438 * 10 9 5 12 12 O 1.21581 * 119.99933 * 359.97438 * 11 10 9 13 13 N 1.34777 * 120.00142 * 179.97438 * 11 10 9 14 14 C 1.46502 * 120.00076 * 179.97438 * 13 11 10 15 15 H 1.09004 * 112.84804 * 23.80398 * 14 13 11 16 16 C 1.53782 * 113.61430 * 154.99634 * 14 13 11 17 17 C 1.53789 * 87.07665 * 139.98343 * 16 14 13 18 18 H 1.08994 * 113.61271 * 89.20113 * 17 16 14 19 19 N 1.46503 * 113.60768 * 220.01978 * 17 16 14 20 20 C 1.34948 * 126.03609 * 85.00953 * 19 17 16 21 21 C 1.35316 * 107.74304 * 179.97438 * 20 19 17 22 22 C 1.39873 * 107.92376 * 359.97438 * 21 20 19 23 23 N 1.30839 * 108.19792 * 359.74062 * 22 21 20 24 24 C 1.53778 * 87.08151 * 334.56611 * 17 16 14 25 25 C 1.37719 * 119.95640 * 180.02562 * 2 1 3 26 26 H 1.08994 * 109.47221 * 269.97395 * 1 2 3 27 27 H 1.09002 * 109.47421 * 29.97863 * 1 2 3 28 28 H 1.09001 * 109.47013 * 149.97864 * 1 2 3 29 29 H 0.96698 * 114.00406 * 269.99790 * 4 3 2 30 30 H 1.08997 * 109.47328 * 44.72332 * 6 5 3 31 31 H 0.96699 * 114.00458 * 300.01055 * 7 6 5 32 32 H 1.48496 * 110.00326 * 58.68159 * 8 6 5 33 33 H 1.48505 * 109.99785 * 179.97438 * 8 6 5 34 34 H 1.07998 * 120.04404 * 179.97438 * 9 5 3 35 35 H 0.96996 * 120.00190 * 359.97438 * 13 11 10 36 36 H 1.08994 * 113.61502 * 254.52711 * 16 14 13 37 37 H 1.09001 * 113.61341 * 25.35235 * 16 14 13 38 38 H 1.08000 * 126.13004 * 359.97438 * 20 19 17 39 39 H 1.08003 * 126.03842 * 179.97438 * 21 20 19 40 40 H 1.08001 * 125.89922 * 180.02562 * 22 21 20 41 41 H 1.09003 * 113.61894 * 270.88558 * 24 17 16 42 42 H 1.09006 * 113.60934 * 139.98102 * 24 17 16 43 43 H 1.07997 * 120.04558 * 359.94915 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5196 2.3778 0.0005 5 6 3.5911 1.2096 -0.0005 6 6 4.3384 2.5182 0.0059 7 8 4.2769 3.1082 -1.2942 8 14 6.1180 2.2146 0.4664 9 6 4.2859 0.0209 -0.0016 10 6 3.5919 -1.1920 -0.0027 11 6 4.3329 -2.4686 -0.0044 12 8 5.5487 -2.4657 -0.0054 13 7 3.6618 -3.6374 -0.0049 14 6 4.3972 -4.9044 -0.0072 15 1 5.4050 -4.8095 0.3972 16 6 3.6028 -6.0789 0.5880 17 6 4.1914 -6.9451 -0.5382 18 1 5.1426 -7.4101 -0.2796 19 7 3.2324 -7.8923 -1.1121 20 6 2.3458 -7.6275 -2.0945 21 6 1.6480 -8.7612 -2.3368 22 6 2.1247 -9.7530 -1.4734 23 7 3.0785 -9.2348 -0.7429 24 6 4.3384 -5.6484 -1.3517 25 6 2.1947 -1.1932 -0.0005 26 1 -0.3633 -0.0005 1.0276 27 1 -0.3634 0.8902 -0.5135 28 1 -0.3633 -0.8898 -0.5142 29 1 1.3218 2.7182 -0.8827 30 1 3.8849 3.1921 0.7326 31 1 4.6632 2.5623 -1.9926 32 1 6.7388 1.2722 -0.4988 33 1 6.8661 3.4974 0.4757 34 1 5.3659 0.0259 -0.0024 35 1 2.6918 -3.6397 -0.0038 36 1 3.9362 -6.3716 1.5835 37 1 2.5221 -5.9521 0.5237 38 1 2.2165 -6.6804 -2.5972 39 1 0.8618 -8.8794 -3.0678 40 1 1.7701 -10.7719 -1.4221 41 1 3.4588 -5.4046 -1.9476 42 1 5.2658 -5.5936 -1.9220 43 1 1.6547 -2.1285 -0.0001 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567756_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:36:57 Heat of formation + Delta-G solvation = 33.753797 kcal Electronic energy + Delta-G solvation = -27488.970432 eV Core-core repulsion = 23504.029240 eV Total energy + Delta-G solvation = -3984.941192 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.39525 -41.77681 -40.78438 -39.36759 -37.99817 -37.55866 -35.08641 -34.10019 -32.47816 -31.51154 -30.94191 -28.18120 -27.17641 -27.05817 -26.27985 -24.52035 -22.55343 -22.14393 -21.96188 -21.55479 -20.50119 -19.69481 -18.83686 -18.74609 -18.15775 -17.31487 -17.00268 -16.75288 -16.44438 -16.12130 -16.00274 -15.85284 -15.60940 -15.41293 -15.12895 -14.80544 -14.49462 -14.29958 -14.17386 -14.09411 -13.93203 -13.73591 -13.44066 -13.37866 -13.15216 -12.91444 -12.81046 -12.51388 -12.42367 -12.11812 -11.78115 -11.71938 -11.57100 -11.08479 -10.64146 -10.38004 -10.32567 -10.09323 -9.75880 -9.53565 -4.97101 -0.48147 -0.02610 0.92856 1.22250 1.40092 1.53619 1.58303 1.92946 1.94744 1.97476 2.46192 2.89567 2.99991 3.14757 3.26156 3.34507 3.40191 3.45413 3.52695 3.58487 3.79250 3.84795 3.94896 4.09136 4.17114 4.24102 4.27919 4.31788 4.42268 4.46330 4.49988 4.54427 4.60107 4.61631 4.68719 4.75922 4.88959 4.90631 4.98249 5.00320 5.09783 5.18256 5.21668 5.43990 5.72812 6.04712 6.23625 6.29256 6.49369 6.78372 6.99794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.117 4.117 3 C 0.163 3.837 4 O -0.487 6.487 5 C -0.147 4.147 6 C -0.067 4.067 7 O -0.528 6.528 8 Si 0.684 3.316 9 C -0.053 4.053 10 C -0.140 4.140 11 C 0.564 3.436 12 O -0.529 6.529 13 N -0.715 5.715 14 C 0.131 3.869 15 H 0.129 0.871 16 C -0.154 4.154 17 C 0.141 3.859 18 H 0.128 0.872 19 N -0.362 5.362 20 C 0.051 3.949 21 C -0.272 4.272 22 C 0.045 3.955 23 N -0.295 5.295 24 C -0.159 4.159 25 C -0.065 4.065 26 H 0.077 0.923 27 H 0.072 0.928 28 H 0.069 0.931 29 H 0.398 0.602 30 H 0.124 0.876 31 H 0.375 0.625 32 H -0.255 1.255 33 H -0.253 1.253 34 H 0.146 0.854 35 H 0.402 0.598 36 H 0.092 0.908 37 H 0.095 0.905 38 H 0.171 0.829 39 H 0.148 0.852 40 H 0.184 0.816 41 H 0.097 0.903 42 H 0.092 0.908 43 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.318 -0.112 -0.820 4.396 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.118 4.118 3 C 0.117 3.883 4 O -0.299 6.299 5 C -0.148 4.148 6 C -0.177 4.177 7 O -0.334 6.334 8 Si 0.585 3.415 9 C -0.071 4.071 10 C -0.144 4.144 11 C 0.352 3.648 12 O -0.405 6.405 13 N -0.367 5.367 14 C 0.025 3.975 15 H 0.146 0.854 16 C -0.193 4.193 17 C 0.038 3.962 18 H 0.146 0.854 19 N -0.144 5.144 20 C -0.095 4.095 21 C -0.302 4.302 22 C -0.141 4.141 23 N -0.116 5.116 24 C -0.199 4.199 25 C -0.084 4.084 26 H 0.096 0.904 27 H 0.090 0.910 28 H 0.088 0.912 29 H 0.257 0.743 30 H 0.142 0.858 31 H 0.222 0.778 32 H -0.180 1.180 33 H -0.177 1.177 34 H 0.163 0.837 35 H 0.238 0.762 36 H 0.111 0.889 37 H 0.113 0.887 38 H 0.188 0.812 39 H 0.166 0.834 40 H 0.201 0.799 41 H 0.116 0.884 42 H 0.111 0.889 43 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.901 0.260 0.851 2.099 hybrid contribution -1.529 0.043 -2.376 2.826 sum -3.430 0.303 -1.525 3.766 Atomic orbital electron populations 1.20702 0.89640 1.03173 1.03203 1.20216 0.97334 0.92092 1.02163 1.18324 0.88795 0.85310 0.95860 1.84696 1.75617 1.35634 1.33921 1.20580 0.93823 0.95870 1.04558 1.24909 1.10542 0.93769 0.88453 1.86615 1.82707 1.47628 1.16478 0.94686 0.74272 0.81319 0.91184 1.21163 1.00906 0.90218 0.94834 1.19763 0.93425 0.93289 1.07876 1.18188 0.87257 0.83588 0.75737 1.90821 1.13271 1.87455 1.48990 1.45791 1.10177 1.05045 1.75686 1.22241 0.98153 0.81253 0.95861 0.85364 1.23891 1.01407 0.94111 0.99866 1.22594 0.92408 0.86073 0.95103 0.85388 1.48648 1.28576 1.08363 1.28847 1.22456 0.92972 1.00745 0.93306 1.21566 1.07836 0.93165 1.07620 1.23969 0.94880 1.00558 0.94721 1.77409 1.20797 0.89585 1.23778 1.23987 1.04706 0.92885 0.98291 1.21084 0.92553 0.97799 0.96944 0.90441 0.90956 0.91227 0.74323 0.85793 0.77754 1.17961 1.17722 0.83695 0.76190 0.88938 0.88674 0.81218 0.83428 0.79926 0.88436 0.88915 0.85099 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.32 9.78 36.01 0.35 0.67 16 2 C -0.12 0.16 5.89 -104.54 -0.62 -0.46 16 3 C 0.16 -0.05 6.66 -39.02 -0.26 -0.30 16 4 O -0.49 0.28 11.84 -18.84 -0.22 0.06 16 5 C -0.15 0.01 5.27 -104.54 -0.55 -0.54 16 6 C -0.07 0.01 2.38 36.00 0.09 0.10 16 7 O -0.53 -0.18 12.88 -35.23 -0.45 -0.63 16 8 Si 0.68 -0.14 30.25 -169.99 -5.14 -5.28 16 9 C -0.05 -0.02 8.19 -39.22 -0.32 -0.34 16 10 C -0.14 0.02 5.87 -104.96 -0.62 -0.59 16 11 C 0.56 0.41 7.76 -12.44 -0.10 0.31 16 12 O -0.53 -2.29 15.94 5.29 0.08 -2.21 16 13 N -0.72 1.69 5.30 -54.03 -0.29 1.40 16 14 C 0.13 -0.32 4.24 -67.12 -0.28 -0.61 16 15 H 0.13 -0.17 7.46 -51.93 -0.39 -0.56 16 16 C -0.15 0.44 7.63 -25.91 -0.20 0.24 16 17 C 0.14 -0.22 5.04 -67.11 -0.34 -0.56 16 18 H 0.13 -0.22 8.14 -51.93 -0.42 -0.64 16 19 N -0.36 -0.33 3.81 -54.07 -0.21 -0.54 16 20 C 0.05 -0.02 10.69 -17.22 -0.18 -0.20 16 21 C -0.27 -0.12 10.80 -40.01 -0.43 -0.55 16 22 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 23 N -0.30 -1.01 12.58 30.63 0.39 -0.62 16 24 C -0.16 0.46 7.23 -25.92 -0.19 0.27 16 25 C -0.06 0.13 9.18 -39.22 -0.36 -0.23 16 26 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 27 H 0.07 -0.21 7.52 -51.93 -0.39 -0.60 16 28 H 0.07 -0.29 8.08 -51.93 -0.42 -0.71 16 29 H 0.40 -1.53 9.06 45.56 0.41 -1.12 16 30 H 0.12 -0.01 7.82 -51.93 -0.41 -0.42 16 31 H 0.37 -0.90 8.70 45.56 0.40 -0.50 16 32 H -0.25 -0.49 6.68 56.52 0.38 -0.11 16 33 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 34 H 0.15 0.14 4.44 -52.49 -0.23 -0.09 16 35 H 0.40 -1.92 6.75 -40.82 -0.28 -2.19 16 36 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 37 H 0.09 -0.29 8.12 -51.93 -0.42 -0.71 16 38 H 0.17 -0.58 6.69 -52.49 -0.35 -0.93 16 39 H 0.15 -0.21 8.06 -52.48 -0.42 -0.64 16 40 H 0.18 -0.19 8.06 -52.49 -0.42 -0.61 16 41 H 0.10 -0.37 6.32 -51.93 -0.33 -0.69 16 42 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 43 H 0.13 -0.64 6.39 -52.49 -0.34 -0.98 16 LS Contribution 361.04 15.07 5.44 5.44 Total: 0.00 -9.95 361.04 -9.11 -19.07 By element: Atomic # 1 Polarization: -9.26 SS G_CDS: -4.50 Total: -13.76 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -4.22 Total: -2.93 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.11 Total: 0.24 kcal Atomic # 8 Polarization: -2.19 SS G_CDS: -0.59 Total: -2.78 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.14 Total: -5.28 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -9.95 -9.11 -19.07 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567756_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.821 kcal (2) G-P(sol) polarization free energy of solvation -9.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.867 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.067 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.754 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds