Wall clock time and date at job start Sun Mar 7 2021 10:38:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36537 * 126.64859 * 2 1 4 4 C 1.46665 * 125.98838 * 0.04299 * 3 2 1 5 5 O 1.21693 * 119.99537 * 359.97438 * 4 3 2 6 6 N 1.34768 * 120.00122 * 180.02562 * 4 3 2 7 7 C 1.46498 * 120.00201 * 179.97438 * 6 4 3 8 8 H 1.09003 * 112.84605 * 23.79781 * 7 6 4 9 9 C 1.53773 * 113.61992 * 154.99715 * 7 6 4 10 10 C 1.53779 * 87.08356 * 139.98298 * 9 7 6 11 11 H 1.08993 * 113.61748 * 89.20112 * 10 9 7 12 12 N 1.46499 * 113.61341 * 220.02131 * 10 9 7 13 13 C 1.34947 * 126.03930 * 84.99766 * 12 10 9 14 14 C 1.35321 * 107.75082 * 179.97438 * 13 12 10 15 15 C 1.39870 * 107.91515 * 359.97438 * 14 13 12 16 16 N 1.30838 * 108.20660 * 359.73954 * 15 14 13 17 17 C 1.53782 * 113.61509 * 252.49888 * 7 6 4 18 18 O 1.34919 * 108.02725 * 179.79767 * 3 2 1 19 19 C 1.33932 * 109.37986 * 0.36673 * 18 3 2 20 20 C 1.50699 * 125.61038 * 179.88518 * 19 18 3 21 21 O 1.42897 * 109.47708 * 269.69569 * 20 19 18 22 22 C 1.35895 * 117.00208 * 180.02562 * 21 20 19 23 23 C 1.38735 * 120.05238 * 180.02562 * 22 21 20 24 24 C 1.38147 * 119.94145 * 180.02562 * 23 22 21 25 25 C 1.38267 * 120.05771 * 0.02731 * 24 23 22 26 26 C 1.50699 * 119.94534 * 179.97438 * 25 24 23 27 27 O 1.42895 * 109.47158 * 299.99634 * 26 25 24 28 28 Si 1.86300 * 109.46944 * 180.02562 * 26 25 24 29 29 C 1.38271 * 120.10847 * 0.24836 * 25 24 23 30 30 C 1.38146 * 120.05540 * 359.45178 * 29 25 24 31 31 C 1.35126 * 108.76636 * 359.63211 * 19 18 3 32 32 H 1.08996 * 109.46884 * 270.00105 * 1 2 3 33 33 H 1.08998 * 109.46939 * 29.99618 * 1 2 3 34 34 H 1.08996 * 109.46768 * 150.00272 * 1 2 3 35 35 H 0.97003 * 120.00257 * 359.97438 * 6 4 3 36 36 H 1.08998 * 113.61661 * 254.53229 * 9 7 6 37 37 H 1.09006 * 113.61439 * 25.34741 * 9 7 6 38 38 H 1.08002 * 126.12528 * 0.02562 * 13 12 10 39 39 H 1.07998 * 126.04109 * 180.02562 * 14 13 12 40 40 H 1.08005 * 125.89861 * 179.97438 * 15 14 13 41 41 H 1.09001 * 113.61056 * 334.56057 * 17 7 6 42 42 H 1.08996 * 113.61749 * 105.46272 * 17 7 6 43 43 H 1.09001 * 109.46586 * 149.69847 * 20 19 18 44 44 H 1.08995 * 109.47495 * 29.70221 * 20 19 18 45 45 H 1.07993 * 120.03312 * 0.02562 * 23 22 21 46 46 H 1.07997 * 119.97419 * 179.97438 * 24 23 22 47 47 H 1.09000 * 109.47247 * 60.00087 * 26 25 24 48 48 H 0.96698 * 114.00355 * 300.00487 * 27 26 25 49 49 H 1.48506 * 110.00048 * 180.02562 * 28 26 25 50 50 H 1.48502 * 109.99996 * 301.31619 * 28 26 25 51 51 H 1.08003 * 119.96765 * 179.70258 * 29 25 24 52 52 H 1.08003 * 120.02761 * 180.25084 * 30 29 25 53 53 H 1.08002 * 126.43610 * 180.20349 * 31 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3220 1.0955 0.0000 4 6 1.8843 2.4953 0.0009 5 8 0.6968 2.7614 0.0013 6 7 2.7971 3.4867 0.0003 7 6 2.3600 4.8850 0.0006 8 1 1.3567 5.0146 0.4066 9 6 3.3952 5.8540 0.5954 10 6 3.0109 6.8304 -0.5288 11 1 2.1864 7.4939 -0.2681 12 7 4.1546 7.5430 -1.1036 13 6 4.9593 7.0902 -2.0877 14 6 5.8901 8.0419 -2.3304 15 6 5.6455 9.1134 -1.4653 16 7 4.6019 8.8180 -0.7335 17 6 2.5796 5.5994 -1.3434 18 8 3.6006 0.6646 0.0045 19 6 3.6183 -0.6745 -0.0007 20 6 4.8550 -1.5357 -0.0005 21 8 5.2458 -1.8086 -1.3477 22 6 6.3511 -2.5790 -1.5255 23 6 6.7873 -2.8828 -2.8069 24 6 7.9109 -3.6666 -2.9850 25 6 8.6001 -4.1486 -1.8876 26 6 9.8251 -5.0039 -2.0848 27 8 9.4723 -6.1801 -2.8155 28 14 10.5174 -5.4893 -0.4247 29 6 8.1640 -3.8519 -0.6094 30 6 7.0446 -3.0634 -0.4260 31 6 2.3448 -1.1262 -0.0005 32 1 -0.3633 0.0000 1.0276 33 1 -0.3633 0.8900 -0.5138 34 1 -0.3633 -0.8900 -0.5138 35 1 3.7437 3.2746 -0.0004 36 1 3.1364 6.2119 1.5919 37 1 4.4211 5.4916 0.5291 38 1 4.8749 6.1388 -2.5920 39 1 6.6813 7.9847 -3.0632 40 1 6.2169 10.0285 -1.4132 41 1 3.3827 5.1680 -1.9410 42 1 1.6623 5.7516 -1.9120 43 1 4.6446 -2.4735 0.5137 44 1 5.6618 -1.0129 0.5130 45 1 6.2491 -2.5070 -3.6644 46 1 8.2507 -3.9038 -3.9823 47 1 10.5751 -4.4417 -2.6413 48 1 8.8076 -6.7300 -2.3786 49 1 11.7263 -6.3326 -0.6054 50 1 10.8586 -4.2744 0.3582 51 1 8.7013 -4.2335 0.2462 52 1 6.7067 -2.8285 0.5726 53 1 2.0306 -2.1595 -0.0009 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567756_4549632.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:38:05 Heat of formation + Delta-G solvation = 60.828990 kcal Electronic energy + Delta-G solvation = -36959.472799 eV Core-core repulsion = 31961.269825 eV Total energy + Delta-G solvation = -4998.202975 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.172 amu Computer time = 2.00 seconds Orbital eigenvalues (eV) -43.95251 -42.35645 -41.30199 -40.99379 -39.36739 -39.19392 -37.17344 -35.57846 -34.78246 -33.22142 -32.24273 -31.98093 -31.47803 -30.98515 -28.92103 -28.39781 -27.02861 -26.26079 -25.78914 -24.13152 -23.13989 -22.68506 -22.26666 -22.24481 -21.78593 -21.04457 -20.37151 -19.47027 -19.20345 -18.72078 -18.32410 -17.55271 -17.39212 -17.07615 -16.91759 -16.69797 -16.62297 -16.07154 -15.93873 -15.84052 -15.63622 -15.59624 -15.36223 -15.07781 -14.76011 -14.64442 -14.34589 -14.31081 -14.15987 -14.12100 -13.98080 -13.81027 -13.63648 -13.60283 -13.58324 -13.40797 -13.35519 -12.85340 -12.73803 -12.38244 -12.22659 -12.06917 -12.04730 -12.04473 -11.72241 -11.62416 -11.34032 -10.81621 -10.42990 -10.40490 -10.39268 -10.03335 -9.73808 -9.55630 -9.22339 -4.99227 -0.28845 0.28300 0.31791 0.90785 0.95690 1.29806 1.34410 1.48779 1.64032 1.90309 1.90534 1.98804 2.00612 2.37031 2.66869 3.00719 3.25672 3.28663 3.48008 3.56883 3.62825 3.64755 3.66660 3.71952 3.81771 3.89684 3.95882 4.00283 4.02067 4.09253 4.28657 4.31918 4.33904 4.36422 4.44062 4.44680 4.47234 4.51367 4.60118 4.63884 4.68912 4.71266 4.73000 4.78261 4.80960 4.91540 4.96651 4.98555 5.07677 5.11518 5.16570 5.21467 5.26570 5.35936 5.51333 5.65778 5.70189 5.71206 6.09697 6.24356 6.29115 6.73321 6.80508 6.83860 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.093 4.093 3 C -0.096 4.096 4 C 0.607 3.393 5 O -0.540 6.540 6 N -0.697 5.697 7 C 0.132 3.868 8 H 0.123 0.877 9 C -0.142 4.142 10 C 0.133 3.867 11 H 0.128 0.872 12 N -0.366 5.366 13 C 0.052 3.948 14 C -0.287 4.287 15 C 0.034 3.966 16 N -0.339 5.339 17 C -0.148 4.148 18 O -0.161 6.161 19 C 0.011 3.989 20 C 0.135 3.865 21 O -0.326 6.326 22 C 0.125 3.875 23 C -0.162 4.162 24 C -0.061 4.061 25 C -0.161 4.161 26 C -0.071 4.071 27 O -0.558 6.558 28 Si 0.778 3.222 29 C -0.078 4.078 30 C -0.201 4.201 31 C -0.187 4.187 32 H 0.081 0.919 33 H 0.071 0.929 34 H 0.086 0.914 35 H 0.416 0.584 36 H 0.094 0.906 37 H 0.098 0.902 38 H 0.198 0.802 39 H 0.163 0.837 40 H 0.200 0.800 41 H 0.108 0.892 42 H 0.095 0.905 43 H 0.132 0.868 44 H 0.102 0.898 45 H 0.132 0.868 46 H 0.133 0.867 47 H 0.103 0.897 48 H 0.395 0.605 49 H -0.304 1.304 50 H -0.283 1.283 51 H 0.150 0.850 52 H 0.160 0.840 53 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.822 -5.299 2.676 5.993 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.096 4.096 3 C -0.148 4.148 4 C 0.394 3.606 5 O -0.420 6.420 6 N -0.348 5.348 7 C 0.026 3.974 8 H 0.141 0.859 9 C -0.181 4.181 10 C 0.031 3.969 11 H 0.146 0.854 12 N -0.148 5.148 13 C -0.094 4.094 14 C -0.316 4.316 15 C -0.152 4.152 16 N -0.160 5.160 17 C -0.187 4.187 18 O -0.058 6.058 19 C -0.040 4.040 20 C 0.061 3.939 21 O -0.241 6.241 22 C 0.080 3.920 23 C -0.180 4.180 24 C -0.079 4.079 25 C -0.161 4.161 26 C -0.181 4.181 27 O -0.366 6.366 28 Si 0.685 3.315 29 C -0.095 4.095 30 C -0.219 4.219 31 C -0.206 4.206 32 H 0.099 0.901 33 H 0.090 0.910 34 H 0.105 0.895 35 H 0.253 0.747 36 H 0.113 0.887 37 H 0.117 0.883 38 H 0.215 0.785 39 H 0.181 0.819 40 H 0.217 0.783 41 H 0.126 0.874 42 H 0.113 0.887 43 H 0.149 0.851 44 H 0.120 0.880 45 H 0.150 0.850 46 H 0.151 0.849 47 H 0.121 0.879 48 H 0.245 0.755 49 H -0.233 1.233 50 H -0.210 1.210 51 H 0.167 0.833 52 H 0.178 0.822 53 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges 0.306 -4.179 3.655 5.561 hybrid contribution 1.056 0.276 -1.240 1.652 sum 1.362 -3.904 2.415 4.788 Atomic orbital electron populations 1.20462 0.87400 1.03898 1.03431 1.20982 0.98451 0.91320 0.98878 1.21838 0.81714 0.94876 1.16364 1.16586 0.85595 0.82247 0.76134 1.90867 1.16732 1.82672 1.51701 1.45720 1.10104 1.05266 1.73670 1.22261 1.00099 0.78348 0.96655 0.85885 1.23804 1.00257 0.94387 0.99662 1.22747 0.86720 0.91594 0.95816 0.85375 1.48821 1.24389 1.12657 1.28983 1.22972 0.92349 1.01484 0.92614 1.21877 1.06052 0.95712 1.08003 1.24380 0.95168 1.01025 0.94578 1.77331 1.16272 0.97033 1.25399 1.23939 1.03959 0.92998 0.97853 1.83959 1.28072 1.22591 1.71138 1.22400 0.96963 0.80281 1.04398 1.21260 0.91656 0.98232 0.82735 1.86104 1.42327 1.66430 1.29211 1.19077 0.86533 0.91713 0.94643 1.20624 0.99107 1.02878 0.95436 1.20912 0.93270 0.94283 0.99474 1.20340 0.99358 1.02614 0.93797 1.25123 0.97252 0.87386 1.08341 1.86463 1.64460 1.35040 1.50656 0.93791 0.81723 0.80418 0.75616 1.21049 0.95596 0.96504 0.96367 1.21483 0.98427 1.03058 0.98977 1.21900 0.90878 1.01298 1.06493 0.90068 0.91026 0.89521 0.74709 0.88740 0.88350 0.78487 0.81896 0.78344 0.87408 0.88685 0.85052 0.88048 0.85034 0.84914 0.87934 0.75499 1.23291 1.21038 0.83324 0.82235 0.79915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.14 9.82 71.24 0.70 0.56 16 2 C -0.09 -0.27 6.20 -19.74 -0.12 -0.39 16 3 C -0.10 -0.36 7.13 24.07 0.17 -0.18 16 4 C 0.61 2.46 7.79 86.44 0.67 3.13 16 5 O -0.54 -5.08 14.34 -4.32 -0.06 -5.14 16 6 N -0.70 1.45 5.35 -444.04 -2.38 -0.92 16 7 C 0.13 -0.49 4.24 45.52 0.19 -0.30 16 8 H 0.12 -0.22 7.46 -2.39 -0.02 -0.24 16 9 C -0.14 0.63 7.63 31.12 0.24 0.87 16 10 C 0.13 -0.28 5.04 45.52 0.23 -0.05 16 11 H 0.13 -0.28 8.14 -2.39 -0.02 -0.30 16 12 N -0.37 -1.12 3.81 -324.99 -1.24 -2.36 16 13 C 0.05 0.01 10.69 83.54 0.89 0.91 16 14 C -0.29 -0.53 10.80 21.99 0.24 -0.30 16 15 C 0.03 0.16 12.02 85.24 1.02 1.18 16 16 N -0.34 -2.86 12.58 -57.02 -0.72 -3.58 16 17 C -0.15 0.73 7.23 31.12 0.22 0.95 16 18 O -0.16 -0.26 10.40 -5.10 -0.05 -0.31 16 19 C 0.01 -0.01 6.94 24.97 0.17 0.16 16 20 C 0.14 -0.83 5.27 71.24 0.38 -0.46 16 21 O -0.33 0.07 10.12 -92.37 -0.93 -0.86 16 22 C 0.13 -0.10 6.69 22.51 0.15 0.06 16 23 C -0.16 -0.11 9.99 22.37 0.22 0.11 16 24 C -0.06 0.00 9.60 22.25 0.21 0.21 16 25 C -0.16 0.28 5.39 -19.85 -0.11 0.17 16 26 C -0.07 0.13 2.82 71.24 0.20 0.33 16 27 O -0.56 0.46 12.76 -148.98 -1.90 -1.45 16 28 Si 0.78 -3.03 29.78 68.60 2.04 -0.99 16 29 C -0.08 0.35 8.66 22.26 0.19 0.54 16 30 C -0.20 0.97 9.04 22.37 0.20 1.17 16 31 C -0.19 0.19 10.73 22.07 0.24 0.42 16 32 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 33 H 0.07 0.37 6.45 -2.39 -0.02 0.36 16 34 H 0.09 -0.18 8.14 -2.39 -0.02 -0.20 16 35 H 0.42 -2.24 8.48 -92.71 -0.79 -3.03 16 36 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 37 H 0.10 -0.45 8.12 -2.38 -0.02 -0.47 16 38 H 0.20 -1.28 6.69 -2.91 -0.02 -1.30 16 39 H 0.16 -0.37 8.06 -2.91 -0.02 -0.39 16 40 H 0.20 -0.15 8.06 -2.91 -0.02 -0.17 16 41 H 0.11 -0.73 6.31 -2.39 -0.02 -0.74 16 42 H 0.09 -0.44 8.14 -2.39 -0.02 -0.45 16 43 H 0.13 -1.58 7.66 -2.39 -0.02 -1.60 16 44 H 0.10 -0.94 7.67 -2.39 -0.02 -0.96 16 45 H 0.13 0.01 8.06 -2.91 -0.02 -0.01 16 46 H 0.13 -0.07 8.06 -2.91 -0.02 -0.10 16 47 H 0.10 -0.02 7.96 -2.39 -0.02 -0.04 16 48 H 0.40 -3.54 8.70 -74.06 -0.64 -4.19 16 49 H -0.30 -1.35 7.11 99.48 0.71 -0.64 16 50 H -0.28 -0.07 7.11 99.48 0.71 0.64 16 51 H 0.15 -1.32 4.87 -2.91 -0.01 -1.33 16 52 H 0.16 -1.73 6.30 -2.91 -0.02 -1.75 16 53 H 0.18 -1.12 8.06 -2.91 -0.02 -1.15 16 Total: 0.00 -25.67 444.72 0.68 -24.99 By element: Atomic # 1 Polarization: -18.07 SS G_CDS: -0.41 Total: -18.48 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: 6.32 Total: 9.10 kcal Atomic # 7 Polarization: -2.53 SS G_CDS: -4.33 Total: -6.86 kcal Atomic # 8 Polarization: -4.81 SS G_CDS: -2.95 Total: -7.76 kcal Atomic # 14 Polarization: -3.03 SS G_CDS: 2.04 Total: -0.99 kcal Total: -25.67 0.68 -24.99 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567756_4549632.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.817 kcal (2) G-P(sol) polarization free energy of solvation -25.666 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.151 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.678 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.988 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.829 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.00 seconds