Wall clock time and date at job start Sun Mar 7 2021 10:38:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.46937 * 2 1 4 4 C 1.50698 * 109.47205 * 240.00068 * 2 1 3 5 5 C 1.38246 * 119.93957 * 300.02049 * 4 2 1 6 6 C 1.38167 * 120.05147 * 179.72488 * 5 4 2 7 7 N 1.48007 * 120.03011 * 180.25823 * 6 5 4 8 8 O 1.21795 * 119.99653 * 0.27109 * 7 6 5 9 9 O 1.21797 * 120.00201 * 180.27593 * 7 6 5 10 10 C 1.38721 * 119.94531 * 0.52824 * 6 5 4 11 11 O 1.35895 * 120.05663 * 179.74553 * 10 6 5 12 12 C 1.42901 * 116.99924 * 179.72563 * 11 10 6 13 13 C 1.50701 * 109.46829 * 180.02562 * 12 11 10 14 14 O 1.21274 * 120.00484 * 359.97438 * 13 12 11 15 15 N 1.34780 * 119.99822 * 180.02562 * 13 12 11 16 16 C 1.46500 * 120.00144 * 180.02562 * 15 13 12 17 17 H 1.08999 * 112.84568 * 333.02785 * 16 15 13 18 18 C 1.53786 * 113.68936 * 104.29530 * 16 15 13 19 19 C 1.53783 * 87.07921 * 89.12760 * 18 16 15 20 20 H 1.09007 * 113.61407 * 139.97912 * 19 18 16 21 21 N 1.46499 * 113.61410 * 270.87996 * 19 18 16 22 22 C 1.34943 * 126.03848 * 302.73562 * 21 19 18 23 23 C 1.35317 * 107.74794 * 179.83901 * 22 21 19 24 24 C 1.39874 * 107.91823 * 0.42016 * 23 22 21 25 25 N 1.30834 * 108.20158 * 359.73736 * 24 23 22 26 26 C 1.53785 * 113.61294 * 201.83188 * 16 15 13 27 27 C 1.38752 * 119.88635 * 359.47393 * 10 6 5 28 28 C 1.38129 * 119.94200 * 0.25174 * 27 10 6 29 29 H 0.96708 * 113.99642 * 60.00060 * 1 2 3 30 30 H 1.08996 * 109.46845 * 119.99617 * 2 1 3 31 31 H 1.48498 * 110.00295 * 298.67737 * 3 2 1 32 32 H 1.48496 * 110.00209 * 59.99976 * 3 2 1 33 33 H 1.07998 * 119.97876 * 359.97438 * 5 4 2 34 34 H 1.08994 * 109.47182 * 60.00154 * 12 11 10 35 35 H 1.09000 * 109.47223 * 299.99816 * 12 11 10 36 36 H 0.97001 * 119.99491 * 359.97438 * 15 13 12 37 37 H 1.09004 * 113.60973 * 203.67160 * 18 16 15 38 38 H 1.08999 * 113.61395 * 334.57873 * 18 16 15 39 39 H 1.08006 * 126.12811 * 359.97438 * 22 21 19 40 40 H 1.07996 * 126.04315 * 180.15898 * 23 22 21 41 41 H 1.07992 * 125.89782 * 179.76292 * 24 23 22 42 42 H 1.08995 * 113.61652 * 25.34792 * 26 16 15 43 43 H 1.09000 * 113.60826 * 156.17045 * 26 16 15 44 44 H 1.07993 * 120.02672 * 180.27257 * 27 10 6 45 45 H 1.07999 * 119.96933 * 180.02562 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5963 -2.0338 -1.4482 6 6 2.0509 -2.6857 -2.5784 7 7 1.6872 -4.1009 -2.8140 8 8 0.9827 -4.6899 -2.0138 9 8 2.0923 -4.6766 -3.8079 10 6 2.8532 -2.0144 -3.4895 11 8 3.3058 -2.6549 -4.5992 12 6 4.1223 -1.8997 -5.4965 13 6 4.5263 -2.7683 -6.6599 14 8 4.1523 -3.9206 -6.7150 15 7 5.3041 -2.2647 -7.6386 16 6 5.6964 -3.1089 -8.7699 17 1 5.7235 -4.1689 -8.5175 18 6 4.9259 -2.8034 -10.0652 19 6 6.0243 -1.7751 -10.3831 20 1 6.3161 -1.7584 -11.4332 21 7 5.7513 -0.4398 -9.8458 22 6 4.6610 0.3122 -10.1040 23 6 4.7867 1.4707 -9.4162 24 6 5.9999 1.4292 -8.7213 25 7 6.5789 0.2844 -8.9781 26 6 6.9586 -2.6163 -9.4974 27 6 3.1881 -0.6861 -3.2685 28 6 2.7263 -0.0373 -2.1399 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5138 0.8900 31 1 1.5880 2.4586 -1.2242 32 1 1.5615 2.4679 1.2084 33 1 0.9754 -2.5574 -0.7364 34 1 5.0141 -1.5547 -4.9733 35 1 3.5608 -1.0404 -5.8629 36 1 5.6036 -1.3432 -7.5943 37 1 4.8960 -3.6402 -10.7631 38 1 3.9460 -2.3572 -9.8954 39 1 3.8348 0.0376 -10.7431 40 1 4.0777 2.2854 -9.4088 41 1 6.3908 2.2075 -8.0828 42 1 7.6196 -2.0192 -8.8694 43 1 7.4850 -3.4023 -10.0389 44 1 3.8089 -0.1600 -3.9785 45 1 2.9864 0.9967 -1.9677 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567756_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:38:19 Heat of formation + Delta-G solvation = 56.944391 kcal Electronic energy + Delta-G solvation = -34245.411647 eV Core-core repulsion = 29430.459639 eV Total energy + Delta-G solvation = -4814.952007 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.135 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -43.32445 -42.49677 -41.79593 -40.91828 -39.78958 -38.98481 -37.64046 -37.48659 -34.77278 -33.51441 -32.36503 -32.16862 -30.88192 -29.94269 -27.84433 -26.90617 -26.69428 -25.86791 -24.17533 -22.98450 -22.56474 -21.80080 -21.72190 -20.59056 -20.26894 -19.80702 -19.20739 -18.77380 -18.66977 -18.29242 -17.93415 -17.69270 -17.42070 -16.90358 -16.69800 -16.37008 -16.16889 -15.80497 -15.68790 -15.41065 -15.19508 -14.91898 -14.78956 -14.51484 -14.09620 -14.04805 -13.71561 -13.67521 -13.59607 -13.26343 -13.19469 -12.97808 -12.72763 -12.46278 -12.40191 -12.29972 -12.23600 -12.01724 -11.84039 -11.82252 -11.43852 -11.15719 -10.87008 -10.76493 -10.40737 -10.21545 -9.84562 -9.48147 -4.91906 -1.33827 -0.27984 0.13179 0.32255 0.97850 1.10655 1.25710 1.30179 1.52730 1.60453 1.96963 1.99891 2.03114 2.22722 3.06867 3.07945 3.16965 3.23753 3.31631 3.40557 3.49111 3.61397 3.68925 3.72900 3.79666 3.87041 3.93783 4.03934 4.20074 4.26190 4.36527 4.50092 4.53946 4.60801 4.61348 4.63253 4.67590 4.76027 4.80869 4.87347 4.93007 4.94065 5.04498 5.15379 5.20814 5.34910 5.68437 5.80382 6.14152 6.26663 6.40075 6.44328 6.79264 6.98023 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.089 4.089 3 Si 0.787 3.213 4 C -0.146 4.146 5 C -0.002 4.002 6 C -0.103 4.103 7 N 0.035 4.965 8 O -0.198 6.198 9 O -0.177 6.177 10 C 0.191 3.809 11 O -0.288 6.288 12 C 0.028 3.972 13 C 0.510 3.490 14 O -0.557 6.557 15 N -0.696 5.696 16 C 0.106 3.894 17 H 0.093 0.907 18 C -0.147 4.147 19 C 0.126 3.874 20 H 0.122 0.878 21 N -0.365 5.365 22 C 0.052 3.948 23 C -0.282 4.282 24 C 0.042 3.958 25 N -0.329 5.329 26 C -0.130 4.130 27 C -0.190 4.190 28 C -0.003 4.003 29 H 0.389 0.611 30 H 0.128 0.872 31 H -0.261 1.261 32 H -0.308 1.308 33 H 0.153 0.847 34 H 0.139 0.861 35 H 0.135 0.865 36 H 0.412 0.588 37 H 0.134 0.866 38 H 0.073 0.927 39 H 0.187 0.813 40 H 0.160 0.840 41 H 0.206 0.794 42 H 0.085 0.915 43 H 0.137 0.863 44 H 0.200 0.800 45 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.998 12.491 -3.783 14.364 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.196 4.196 3 Si 0.689 3.311 4 C -0.147 4.147 5 C -0.021 4.021 6 C -0.188 4.188 7 N 0.545 4.455 8 O -0.406 6.406 9 O -0.390 6.390 10 C 0.141 3.859 11 O -0.198 6.198 12 C -0.049 4.049 13 C 0.296 3.704 14 O -0.433 6.433 15 N -0.351 5.351 16 C 0.001 3.999 17 H 0.111 0.889 18 C -0.187 4.187 19 C 0.024 3.976 20 H 0.139 0.861 21 N -0.148 5.148 22 C -0.094 4.094 23 C -0.311 4.311 24 C -0.143 4.143 25 N -0.151 5.151 26 C -0.168 4.168 27 C -0.209 4.209 28 C -0.020 4.020 29 H 0.239 0.761 30 H 0.146 0.854 31 H -0.186 1.186 32 H -0.236 1.236 33 H 0.171 0.829 34 H 0.157 0.843 35 H 0.153 0.847 36 H 0.250 0.750 37 H 0.152 0.848 38 H 0.091 0.909 39 H 0.204 0.796 40 H 0.178 0.822 41 H 0.223 0.777 42 H 0.104 0.896 43 H 0.155 0.845 44 H 0.217 0.783 45 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges 6.787 11.707 -3.094 13.881 hybrid contribution -2.131 -0.163 -0.675 2.241 sum 4.656 11.544 -3.769 13.006 Atomic orbital electron populations 1.86636 1.18419 1.80450 1.50323 1.25502 0.83646 1.13013 0.97486 0.94167 0.89358 0.70023 0.77535 1.20392 1.01951 0.92559 0.99819 1.20866 0.94103 0.94751 0.92349 1.20847 1.13200 0.81707 1.03030 1.43876 0.98256 1.03915 0.99469 1.94499 1.35593 1.68283 1.42250 1.94681 1.56658 1.69236 1.18389 1.18991 0.89794 0.92137 0.84981 1.86465 1.63562 1.39499 1.30319 1.22997 0.97970 0.94371 0.89585 1.20460 0.78520 0.87714 0.83734 1.90833 1.54644 1.19673 1.78195 1.45561 1.51406 1.16389 1.21746 1.22068 0.96388 0.95835 0.85634 0.88873 1.23910 0.97729 0.99348 0.97693 1.22376 0.98622 0.77755 0.98834 0.86061 1.48597 1.15438 1.14149 1.36609 1.22923 0.92742 0.92654 1.01069 1.21826 1.01693 1.00840 1.06782 1.24425 0.94173 0.95815 0.99922 1.77304 1.18160 1.07576 1.12031 1.23512 0.95821 0.99743 0.97764 1.21761 1.06197 0.90506 1.02406 1.21708 0.89352 1.01291 0.89656 0.76137 0.85381 1.18641 1.23600 0.82922 0.84307 0.84704 0.74965 0.84811 0.90864 0.79563 0.82192 0.77701 0.89609 0.84529 0.78313 0.79408 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.83 12.77 -148.98 -1.90 -1.07 16 2 C -0.09 0.56 2.82 71.24 0.20 0.77 16 3 Si 0.79 -7.79 29.78 68.60 2.04 -5.75 16 4 C -0.15 0.81 5.39 -19.85 -0.11 0.70 16 5 C 0.00 0.00 9.11 22.25 0.20 0.20 16 6 C -0.10 -0.77 6.87 36.48 0.25 -0.52 16 7 N 0.03 0.59 4.45 -46.24 -0.21 0.38 16 8 O -0.20 -3.69 18.45 18.89 0.35 -3.34 16 9 O -0.18 -3.92 17.24 25.61 0.44 -3.48 16 10 C 0.19 0.34 6.67 22.51 0.15 0.49 16 11 O -0.29 -1.80 7.68 -63.34 -0.49 -2.29 16 12 C 0.03 -0.10 5.22 71.24 0.37 0.27 16 13 C 0.51 2.18 7.91 87.66 0.69 2.87 16 14 O -0.56 -8.93 16.14 16.03 0.26 -8.67 16 15 N -0.70 0.76 5.11 -440.03 -2.25 -1.49 16 16 C 0.11 -0.19 4.28 45.52 0.19 0.00 16 17 H 0.09 0.21 7.54 -2.39 -0.02 0.19 16 18 C -0.15 0.85 7.54 31.12 0.23 1.08 16 19 C 0.13 -0.81 4.90 45.52 0.22 -0.58 16 20 H 0.12 -1.11 8.14 -2.38 -0.02 -1.13 16 21 N -0.37 1.37 2.78 -324.97 -0.91 0.46 16 22 C 0.05 -0.27 11.01 83.54 0.92 0.65 16 23 C -0.28 1.63 10.80 21.99 0.24 1.87 16 24 C 0.04 -0.22 12.03 85.24 1.03 0.80 16 25 N -0.33 0.60 10.37 -57.03 -0.59 0.01 16 26 C -0.13 0.78 7.44 31.12 0.23 1.01 16 27 C -0.19 1.77 9.04 22.37 0.20 1.97 16 28 C 0.00 0.03 8.66 22.25 0.19 0.22 16 29 H 0.39 -3.03 8.70 -74.05 -0.64 -3.68 16 30 H 0.13 -0.90 7.96 -2.39 -0.02 -0.92 16 31 H -0.26 2.26 7.11 99.48 0.71 2.97 16 32 H -0.31 -0.01 7.11 99.48 0.71 0.70 16 33 H 0.15 0.55 7.61 -2.91 -0.02 0.53 16 34 H 0.14 -1.59 7.66 -2.39 -0.02 -1.61 16 35 H 0.14 -1.50 7.66 -2.39 -0.02 -1.52 16 36 H 0.41 -1.61 6.45 -92.71 -0.60 -2.21 16 37 H 0.13 -1.23 8.14 -2.39 -0.02 -1.25 16 38 H 0.07 -0.26 7.81 -2.39 -0.02 -0.28 16 39 H 0.19 -1.76 8.06 -2.91 -0.02 -1.78 16 40 H 0.16 -1.42 8.06 -2.91 -0.02 -1.44 16 41 H 0.21 -2.27 8.06 -2.91 -0.02 -2.30 16 42 H 0.09 -0.26 7.51 -2.39 -0.02 -0.28 16 43 H 0.14 -1.38 8.14 -2.39 -0.02 -1.40 16 44 H 0.20 -3.61 6.30 -2.91 -0.02 -3.63 16 45 H 0.19 -3.50 4.87 -2.91 -0.01 -3.52 16 Total: 0.00 -37.82 387.35 1.85 -35.96 By element: Atomic # 1 Polarization: -22.42 SS G_CDS: -0.12 Total: -22.54 kcal Atomic # 6 Polarization: 6.58 SS G_CDS: 5.22 Total: 11.80 kcal Atomic # 7 Polarization: 3.31 SS G_CDS: -3.95 Total: -0.64 kcal Atomic # 8 Polarization: -17.50 SS G_CDS: -1.34 Total: -18.84 kcal Atomic # 14 Polarization: -7.79 SS G_CDS: 2.04 Total: -5.75 kcal Total: -37.82 1.85 -35.96 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567756_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.908 kcal (2) G-P(sol) polarization free energy of solvation -37.818 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.090 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.964 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.944 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds