Wall clock time and date at job start Sun Mar 7 2021 10:39:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.46913 * 2 1 4 4 C 1.50696 * 109.47122 * 119.99571 * 2 1 3 5 5 C 1.34244 * 126.50403 * 255.31990 * 4 2 1 6 6 N 1.36832 * 109.93932 * 180.16607 * 5 4 2 7 7 C 1.46495 * 125.06447 * 179.81655 * 6 5 4 8 8 C 1.50701 * 109.46917 * 264.69952 * 7 6 5 9 9 O 1.21276 * 119.99961 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99810 * 180.02562 * 8 7 6 11 11 C 1.46500 * 119.99895 * 180.02562 * 10 8 7 12 12 H 1.09008 * 112.90540 * 336.24622 * 11 10 8 13 13 C 1.53775 * 113.61656 * 107.50207 * 11 10 8 14 14 C 1.53779 * 87.08438 * 139.98199 * 13 11 10 15 15 H 1.09002 * 113.61731 * 89.11293 * 14 13 11 16 16 N 1.46500 * 113.68825 * 220.00754 * 14 13 11 17 17 C 1.34948 * 126.04121 * 13.77888 * 16 14 13 18 18 C 1.35313 * 107.74870 * 179.84046 * 17 16 14 19 19 C 1.39872 * 107.91990 * 0.41922 * 18 17 16 20 20 N 1.30840 * 108.20152 * 359.74151 * 19 18 17 21 21 C 1.53777 * 113.61534 * 204.99945 * 11 10 8 22 22 C 1.37694 * 109.87599 * 359.55134 * 6 5 4 23 23 C 1.39078 * 133.51764 * 180.24284 * 22 6 5 24 24 C 1.37790 * 119.77872 * 180.02562 * 23 22 6 25 25 C 1.38786 * 120.66897 * 359.97438 * 24 23 22 26 26 C 1.36661 * 120.52589 * 0.02562 * 25 24 23 27 27 C 1.39587 * 119.76381 * 359.97438 * 26 25 24 28 28 H 0.96699 * 114.00198 * 300.00134 * 1 2 3 29 29 H 1.08989 * 109.47587 * 239.99827 * 2 1 3 30 30 H 1.48497 * 110.00005 * 178.67957 * 3 2 1 31 31 H 1.48498 * 110.00238 * 299.99603 * 3 2 1 32 32 H 1.07993 * 125.02896 * 0.02562 * 5 4 2 33 33 H 1.08995 * 109.47525 * 144.69427 * 7 6 5 34 34 H 1.09002 * 109.47323 * 24.69810 * 7 6 5 35 35 H 0.97002 * 120.00021 * 359.97438 * 10 8 7 36 36 H 1.08993 * 113.61636 * 25.42563 * 13 11 10 37 37 H 1.09008 * 113.61006 * 254.52805 * 13 11 10 38 38 H 1.08000 * 126.12316 * 359.97438 * 17 16 14 39 39 H 1.07997 * 126.04317 * 180.15988 * 18 17 16 40 40 H 1.08000 * 125.90002 * 179.71549 * 19 18 17 41 41 H 1.08997 * 113.61941 * 105.46412 * 21 11 10 42 42 H 1.09005 * 113.61136 * 334.56577 * 21 11 10 43 43 H 1.07999 * 120.11214 * 0.04716 * 23 22 6 44 44 H 1.08006 * 119.66709 * 179.97438 * 24 23 22 45 45 H 1.07996 * 119.73585 * 179.97438 * 25 24 23 46 46 H 1.07997 * 120.11762 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.4553 -0.1371 2.3255 6 7 2.8027 -1.0988 3.2347 7 6 3.4073 -0.8402 4.5438 8 6 4.9056 -0.9624 4.4380 9 8 5.4179 -1.2388 3.3740 10 7 5.6763 -0.7655 5.5261 11 6 7.1329 -0.8838 5.4231 12 1 7.4498 -1.5096 4.5887 13 6 7.8671 0.4654 5.4950 14 6 8.9229 -0.2444 6.3589 15 1 9.7292 -0.6953 5.7804 16 7 9.4099 0.5665 7.4777 17 6 8.8456 1.7016 7.9403 18 6 9.5931 2.1400 8.9796 19 6 10.6559 1.2473 9.1521 20 7 10.5472 0.3036 8.2523 21 6 7.8177 -1.2382 6.7536 22 6 2.4939 -2.3455 2.7386 23 6 2.6292 -3.6360 3.2393 24 6 2.2159 -4.7106 2.4823 25 6 1.6643 -4.5192 1.2232 26 6 1.5220 -3.2599 0.7118 27 6 1.9340 -2.1569 1.4615 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8898 30 1 3.5345 1.7703 0.0322 31 1 1.5615 2.4679 -1.2085 32 1 2.5857 0.9256 2.4668 33 1 3.0337 -1.5656 5.2664 34 1 3.1472 0.1663 4.8718 35 1 5.2665 -0.5448 6.3771 36 1 7.3123 1.2365 6.0293 37 1 8.2483 0.8069 4.5326 38 1 7.9555 2.1742 7.5521 39 1 9.4049 3.0253 9.5688 40 1 11.4325 1.3239 9.8988 41 1 8.1589 -2.2720 6.8074 42 1 7.2493 -0.9328 7.6321 43 1 3.0565 -3.7953 4.2182 44 1 2.3222 -5.7120 2.8727 45 1 1.3458 -5.3723 0.6426 46 1 1.0915 -3.1186 -0.2685 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567756_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:39:14 Heat of formation + Delta-G solvation = 122.395468 kcal Electronic energy + Delta-G solvation = -30102.150735 eV Core-core repulsion = 25962.319716 eV Total energy + Delta-G solvation = -4139.831019 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.58193 -42.36242 -41.06240 -39.46049 -38.02221 -37.54160 -35.10173 -34.05768 -32.27898 -31.34989 -30.99307 -30.15705 -29.05808 -27.24452 -26.34944 -25.36382 -23.69822 -22.89783 -22.41864 -22.07496 -21.71646 -20.71366 -20.48082 -18.90468 -18.66438 -18.41683 -17.69093 -17.26981 -17.03759 -16.58289 -16.36780 -16.33557 -15.98102 -15.69883 -15.54006 -15.32570 -15.16888 -14.81176 -14.63185 -14.50550 -14.27700 -14.18299 -13.98583 -13.89180 -13.63179 -13.51267 -13.31634 -12.87595 -12.62472 -12.58633 -12.48248 -12.19110 -12.14865 -12.04235 -11.71067 -11.61286 -11.20781 -10.46886 -10.44811 -10.38112 -10.25361 -9.57711 -9.06516 -8.57036 -5.05719 0.23754 0.74764 0.88445 1.24076 1.24940 1.36719 1.50325 1.62334 1.74508 1.91135 2.04030 2.05045 2.83198 3.06688 3.07583 3.25758 3.36749 3.44371 3.46489 3.61293 3.71505 3.74293 3.74733 3.81685 3.89910 4.02957 4.16619 4.20413 4.24900 4.27949 4.33117 4.43282 4.54570 4.55094 4.63920 4.67922 4.69340 4.75737 4.84189 4.86456 4.94986 5.06024 5.10780 5.21767 5.60859 5.68906 5.76706 5.82159 5.86185 6.00378 6.02659 6.24049 6.31812 6.73042 6.74375 6.85706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.196 4.196 5 C 0.068 3.932 6 N -0.467 5.467 7 C 0.092 3.908 8 C 0.493 3.507 9 O -0.510 6.510 10 N -0.717 5.717 11 C 0.131 3.869 12 H 0.126 0.874 13 C -0.158 4.158 14 C 0.141 3.859 15 H 0.128 0.872 16 N -0.363 5.363 17 C 0.051 3.949 18 C -0.272 4.272 19 C 0.045 3.955 20 N -0.295 5.295 21 C -0.153 4.153 22 C 0.108 3.892 23 C -0.128 4.128 24 C -0.096 4.096 25 C -0.145 4.145 26 C -0.066 4.066 27 C -0.087 4.087 28 H 0.376 0.624 29 H 0.111 0.889 30 H -0.256 1.256 31 H -0.254 1.254 32 H 0.171 0.829 33 H 0.119 0.881 34 H 0.125 0.875 35 H 0.404 0.596 36 H 0.098 0.902 37 H 0.091 0.909 38 H 0.171 0.829 39 H 0.148 0.852 40 H 0.184 0.816 41 H 0.091 0.909 42 H 0.096 0.904 43 H 0.114 0.886 44 H 0.125 0.875 45 H 0.123 0.877 46 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.645 3.460 6.549 7.865 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.584 3.416 4 C -0.204 4.204 5 C -0.057 4.057 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.277 3.723 9 O -0.383 6.383 10 N -0.370 5.370 11 C 0.025 3.975 12 H 0.143 0.857 13 C -0.198 4.198 14 C 0.038 3.962 15 H 0.145 0.855 16 N -0.145 5.145 17 C -0.095 4.095 18 C -0.301 4.301 19 C -0.141 4.141 20 N -0.116 5.116 21 C -0.192 4.192 22 C 0.004 3.996 23 C -0.149 4.149 24 C -0.116 4.116 25 C -0.164 4.164 26 C -0.084 4.084 27 C -0.091 4.091 28 H 0.223 0.777 29 H 0.128 0.872 30 H -0.181 1.181 31 H -0.179 1.179 32 H 0.188 0.812 33 H 0.137 0.863 34 H 0.143 0.857 35 H 0.239 0.761 36 H 0.116 0.884 37 H 0.110 0.890 38 H 0.188 0.812 39 H 0.166 0.834 40 H 0.201 0.799 41 H 0.110 0.890 42 H 0.114 0.886 43 H 0.132 0.868 44 H 0.143 0.857 45 H 0.141 0.859 46 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -1.104 2.470 4.473 5.228 hybrid contribution -0.222 0.337 0.810 0.905 sum -1.326 2.807 5.283 6.128 Atomic orbital electron populations 1.86505 1.17493 1.81757 1.48914 1.24331 0.84641 1.08756 0.96299 0.95432 0.80933 0.77511 0.87741 1.20646 1.10029 0.92380 0.97348 1.21502 1.01032 0.93808 0.89309 1.43181 1.52590 1.04665 1.14595 1.21582 0.90458 1.06009 0.85376 1.21119 0.89656 0.77120 0.84431 1.90826 1.74611 1.45205 1.27680 1.45850 1.06473 1.72476 1.12234 1.22215 0.79048 0.97008 0.99228 0.85669 1.23976 0.96201 0.98519 1.01092 1.22571 0.95571 0.92446 0.85584 0.85453 1.48636 1.20371 1.19510 1.25971 1.22447 1.00263 0.89673 0.97103 1.21571 0.99656 1.05228 1.03657 1.23979 0.99299 0.92707 0.98101 1.77418 1.02860 1.23944 1.07352 1.23889 0.96345 1.01232 0.97756 1.18160 1.01226 0.85842 0.94362 1.19949 1.05056 0.89252 1.00624 1.20832 0.98287 0.97958 0.94475 1.20676 1.02390 0.96950 0.96413 1.20313 0.97962 0.90956 0.99182 1.18948 1.03366 0.92826 0.93931 0.77714 0.87167 1.18082 1.17905 0.81193 0.86319 0.85742 0.76076 0.88365 0.89029 0.81205 0.83379 0.79895 0.89043 0.88573 0.86750 0.85709 0.85909 0.85957 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.69 12.88 -35.23 -0.45 -1.14 16 2 C -0.03 -0.03 3.06 36.00 0.11 0.08 16 3 Si 0.68 -0.39 30.76 -169.99 -5.23 -5.62 16 4 C -0.20 -0.38 5.57 -102.71 -0.57 -0.95 16 5 C 0.07 0.00 9.89 -16.73 -0.17 -0.17 16 6 N -0.47 -0.16 2.27 -115.71 -0.26 -0.43 16 7 C 0.09 -0.34 6.48 -5.20 -0.03 -0.37 16 8 C 0.49 -0.65 7.90 -10.98 -0.09 -0.74 16 9 O -0.51 -2.05 16.02 5.56 0.09 -1.96 16 10 N -0.72 3.05 5.35 -53.02 -0.28 2.77 16 11 C 0.13 -0.42 4.24 -67.12 -0.28 -0.70 16 12 H 0.13 -0.16 7.47 -51.92 -0.39 -0.55 16 13 C -0.16 0.55 7.24 -25.92 -0.19 0.36 16 14 C 0.14 -0.27 5.03 -67.12 -0.34 -0.61 16 15 H 0.13 -0.22 8.14 -51.93 -0.42 -0.65 16 16 N -0.36 -0.21 3.81 -54.07 -0.21 -0.42 16 17 C 0.05 -0.04 10.70 -17.22 -0.18 -0.22 16 18 C -0.27 -0.02 10.80 -40.01 -0.43 -0.45 16 19 C 0.05 0.06 12.03 -17.36 -0.21 -0.15 16 20 N -0.30 -0.94 12.58 30.63 0.39 -0.56 16 21 C -0.15 0.52 7.63 -25.92 -0.20 0.32 16 22 C 0.11 0.31 6.80 -83.99 -0.57 -0.26 16 23 C -0.13 -0.27 10.00 -39.43 -0.39 -0.67 16 24 C -0.10 -0.19 10.01 -39.54 -0.40 -0.58 16 25 C -0.15 -0.36 9.97 -39.95 -0.40 -0.76 16 26 C -0.07 -0.23 10.05 -39.65 -0.40 -0.63 16 27 C -0.09 -0.33 6.35 -105.14 -0.67 -1.00 16 28 H 0.38 -1.08 8.70 45.56 0.40 -0.69 16 29 H 0.11 0.24 7.96 -51.94 -0.41 -0.17 16 30 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 31 H -0.25 -0.68 7.11 56.52 0.40 -0.27 16 32 H 0.17 -0.63 6.35 -52.49 -0.33 -0.96 16 33 H 0.12 -0.67 8.14 -51.93 -0.42 -1.10 16 34 H 0.12 -0.91 8.12 -51.93 -0.42 -1.33 16 35 H 0.40 -2.94 8.73 -40.82 -0.36 -3.30 16 36 H 0.10 -0.46 6.33 -51.93 -0.33 -0.79 16 37 H 0.09 -0.25 8.14 -51.92 -0.42 -0.67 16 38 H 0.17 -0.69 6.70 -52.49 -0.35 -1.05 16 39 H 0.15 -0.27 8.06 -52.49 -0.42 -0.70 16 40 H 0.18 -0.23 8.06 -52.49 -0.42 -0.66 16 41 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 42 H 0.10 -0.36 8.12 -51.93 -0.42 -0.78 16 43 H 0.11 0.01 8.06 -52.49 -0.42 -0.41 16 44 H 0.12 -0.02 8.06 -52.48 -0.42 -0.45 16 45 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 46 H 0.12 0.33 8.06 -52.49 -0.42 -0.09 16 LS Contribution 391.01 15.07 5.89 5.89 Total: 0.00 -13.33 391.01 -11.52 -24.85 By element: Atomic # 1 Polarization: -9.84 SS G_CDS: -6.04 Total: -15.88 kcal Atomic # 6 Polarization: -2.10 SS G_CDS: -5.41 Total: -7.50 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -0.37 Total: 1.37 kcal Atomic # 8 Polarization: -2.74 SS G_CDS: -0.36 Total: -3.11 kcal Atomic # 14 Polarization: -0.39 SS G_CDS: -5.23 Total: -5.62 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -13.33 -11.52 -24.85 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567756_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 147.243 kcal (2) G-P(sol) polarization free energy of solvation -13.329 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 133.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.518 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.848 kcal (6) G-S(sol) free energy of system = (1) + (5) 122.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds