Wall clock time and date at job start Sun Mar 7 2021 06:59:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86306 * 109.47105 * 2 1 4 4 C 1.50697 * 109.46856 * 240.00424 * 2 1 3 5 5 C 1.38709 * 120.02724 * 284.99852 * 4 2 1 6 6 O 1.35900 * 120.05786 * 0.04279 * 5 4 2 7 7 C 1.42894 * 117.00366 * 179.97438 * 6 5 4 8 8 C 1.50699 * 109.47579 * 180.02562 * 7 6 5 9 9 O 1.21283 * 119.99341 * 0.02562 * 8 7 6 10 10 N 1.34776 * 120.00405 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99941 * 180.02562 * 10 8 7 12 12 C 1.53001 * 109.46818 * 179.97438 * 11 10 8 13 13 H 1.08997 * 112.84960 * 316.19192 * 12 11 10 14 14 C 1.53782 * 113.61643 * 87.50204 * 12 11 10 15 15 C 1.53784 * 87.08258 * 139.97774 * 14 12 11 16 16 H 1.09002 * 113.68947 * 89.12378 * 15 14 12 17 17 N 1.46494 * 113.61289 * 220.01731 * 15 14 12 18 18 C 1.34947 * 126.04046 * 12.50267 * 17 15 14 19 19 C 1.35315 * 107.74392 * 179.97438 * 18 17 15 20 20 C 1.39864 * 107.92313 * 359.97438 * 19 18 17 21 21 N 1.30837 * 108.20153 * 359.74203 * 20 19 18 22 22 C 1.53781 * 113.61130 * 184.99839 * 12 11 10 23 23 C 1.38759 * 119.88974 * 180.02562 * 5 4 2 24 24 C 1.38120 * 119.94381 * 0.02562 * 23 5 4 25 25 C 1.38285 * 120.05710 * 0.02562 * 24 23 5 26 26 C 1.38171 * 120.03194 * 105.04373 * 4 2 1 27 27 H 0.96710 * 114.00029 * 59.99559 * 1 2 3 28 28 H 1.08991 * 109.47103 * 120.00103 * 2 1 3 29 29 H 1.48498 * 109.99955 * 298.68535 * 3 2 1 30 30 H 1.48505 * 109.99779 * 60.00109 * 3 2 1 31 31 H 1.09001 * 109.47530 * 300.00843 * 7 6 5 32 32 H 1.08998 * 109.46987 * 60.00416 * 7 6 5 33 33 H 0.97002 * 119.99581 * 359.97438 * 10 8 7 34 34 H 1.09005 * 109.46561 * 299.99486 * 11 10 8 35 35 H 1.08998 * 109.47326 * 59.99486 * 11 10 8 36 36 H 1.08997 * 113.61347 * 254.53007 * 14 12 11 37 37 H 1.09002 * 113.61444 * 25.43020 * 14 12 11 38 38 H 1.07999 * 126.12579 * 359.95223 * 18 17 15 39 39 H 1.08006 * 126.03586 * 179.97438 * 19 18 17 40 40 H 1.08008 * 125.89550 * 179.97438 * 20 19 18 41 41 H 1.09004 * 113.61890 * 334.56599 * 22 12 11 42 42 H 1.09003 * 113.61646 * 105.38522 * 22 12 11 43 43 H 1.08001 * 120.02961 * 179.97438 * 23 5 4 44 44 H 1.07997 * 119.97310 * 179.97438 * 24 23 5 45 45 H 1.08000 * 119.95126 * 179.70618 * 25 24 23 46 46 H 1.08005 * 119.97031 * 359.97395 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.8696 -2.0939 -1.3071 6 8 1.3555 -2.8106 -0.2732 7 6 1.3228 -4.2314 -0.4215 8 6 0.7241 -4.8520 0.8144 9 8 0.3606 -4.1468 1.7317 10 7 0.5925 -6.1906 0.9003 11 6 0.0099 -6.7937 2.1016 12 6 -0.0249 -8.3151 1.9427 13 1 -0.3675 -8.6300 0.9570 14 6 1.2676 -9.0119 2.3995 15 6 0.3713 -10.1066 3.0022 16 1 0.1375 -10.9131 2.3072 17 7 0.8347 -10.5937 4.3038 18 6 1.7813 -10.0195 5.0753 19 6 1.9165 -10.7726 6.1913 20 6 1.0215 -11.8435 6.0989 21 7 0.3683 -11.7340 4.9706 22 6 -0.7315 -9.0393 3.1008 23 6 2.3333 -2.7451 -2.4412 24 6 2.8556 -2.0145 -3.4906 25 6 2.9169 -0.6352 -3.4115 26 6 2.4545 0.0160 -2.2831 27 1 -0.3934 0.4418 -0.7651 28 1 1.7923 -0.5138 0.8899 29 1 1.5878 2.4586 -1.2242 30 1 1.5615 2.4679 1.2086 31 1 0.7165 -4.4924 -1.2889 32 1 2.3370 -4.6055 -0.5614 33 1 0.8829 -6.7545 0.1664 34 1 0.6154 -6.5324 2.9694 35 1 -1.0045 -6.4199 2.2404 36 1 1.8897 -9.3615 1.5756 37 1 1.8282 -8.4473 3.1445 38 1 2.3325 -9.1201 4.8434 39 1 2.5956 -10.5808 7.0089 40 1 0.8896 -12.6237 6.8340 41 1 -0.7174 -8.4822 4.0376 42 1 -1.7238 -9.4098 2.8436 43 1 2.2868 -3.8223 -2.5031 44 1 3.2170 -2.5208 -4.3734 45 1 3.3300 -0.0660 -4.2310 46 1 2.5030 1.0933 -2.2238 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567758_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:59:15 Heat of formation + Delta-G solvation = 43.925603 kcal Electronic energy + Delta-G solvation = -28638.698639 eV Core-core repulsion = 24498.660911 eV Total energy + Delta-G solvation = -4140.037728 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.31710 -41.62369 -40.76651 -39.86236 -38.47914 -37.48872 -35.76696 -32.87160 -32.67125 -31.42364 -30.95673 -30.16835 -28.07420 -27.14630 -26.64007 -24.68949 -23.49279 -22.63547 -22.28276 -21.78107 -21.51545 -20.34349 -19.53056 -18.83431 -18.10044 -17.86055 -17.58387 -17.23401 -16.96980 -16.91135 -16.40065 -16.07483 -15.71922 -15.67613 -15.52864 -15.32040 -15.03183 -14.91517 -14.73795 -14.37198 -14.15139 -14.00115 -13.65315 -13.55077 -13.51706 -13.39150 -13.08356 -13.05792 -12.54529 -12.47864 -12.20781 -12.04338 -11.86140 -11.83958 -11.57807 -11.52243 -10.92931 -10.41692 -10.31311 -10.28472 -10.03896 -9.49163 -9.24854 -4.90727 0.17395 0.36973 0.97077 1.36181 1.37338 1.45369 1.54990 1.61792 1.98770 2.02855 2.48226 2.63996 2.95333 3.06150 3.30805 3.39408 3.46490 3.52375 3.69113 3.74141 3.75188 3.82354 3.84900 3.92696 3.96094 3.99254 4.11166 4.22330 4.29728 4.30616 4.35343 4.44938 4.48155 4.54773 4.61867 4.65469 4.68327 4.76651 4.87028 4.94915 5.00720 5.14149 5.19299 5.21965 5.28320 5.44567 5.64803 5.76807 6.09284 6.16668 6.32526 6.58099 6.82034 7.03897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.145 4.145 5 C 0.152 3.848 6 O -0.278 6.278 7 C 0.039 3.961 8 C 0.514 3.486 9 O -0.507 6.507 10 N -0.728 5.728 11 C 0.134 3.866 12 C -0.120 4.120 13 H 0.108 0.892 14 C -0.141 4.141 15 C 0.138 3.862 16 H 0.124 0.876 17 N -0.364 5.364 18 C 0.052 3.948 19 C -0.273 4.273 20 C 0.045 3.955 21 N -0.298 5.298 22 C -0.136 4.136 23 C -0.212 4.212 24 C -0.072 4.072 25 C -0.151 4.151 26 C -0.083 4.083 27 H 0.370 0.630 28 H 0.118 0.882 29 H -0.260 1.260 30 H -0.257 1.257 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.402 0.598 34 H 0.074 0.926 35 H 0.076 0.924 36 H 0.087 0.913 37 H 0.097 0.903 38 H 0.171 0.829 39 H 0.148 0.852 40 H 0.183 0.817 41 H 0.094 0.906 42 H 0.086 0.914 43 H 0.129 0.871 44 H 0.128 0.872 45 H 0.129 0.871 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.687 -1.835 -5.469 7.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.175 4.175 3 Si 0.590 3.410 4 C -0.146 4.146 5 C 0.106 3.894 6 O -0.189 6.189 7 C -0.039 4.039 8 C 0.299 3.701 9 O -0.380 6.380 10 N -0.383 5.383 11 C 0.011 3.989 12 C -0.139 4.139 13 H 0.126 0.874 14 C -0.179 4.179 15 C 0.035 3.965 16 H 0.141 0.859 17 N -0.146 5.146 18 C -0.094 4.094 19 C -0.303 4.303 20 C -0.141 4.141 21 N -0.118 5.118 22 C -0.175 4.175 23 C -0.231 4.231 24 C -0.090 4.090 25 C -0.169 4.169 26 C -0.101 4.101 27 H 0.217 0.783 28 H 0.136 0.864 29 H -0.186 1.186 30 H -0.182 1.182 31 H 0.111 0.889 32 H 0.112 0.888 33 H 0.237 0.763 34 H 0.092 0.908 35 H 0.094 0.906 36 H 0.106 0.894 37 H 0.115 0.885 38 H 0.188 0.812 39 H 0.166 0.834 40 H 0.200 0.800 41 H 0.113 0.887 42 H 0.105 0.895 43 H 0.147 0.853 44 H 0.146 0.854 45 H 0.147 0.853 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.269 -1.181 -4.898 6.006 hybrid contribution -0.181 -0.455 -0.611 0.783 sum 3.088 -1.636 -5.509 6.524 Atomic orbital electron populations 1.86708 1.17563 1.79609 1.48671 1.24900 0.84016 1.10321 0.98238 0.95128 0.91432 0.74478 0.79951 1.19642 1.05589 0.90986 0.98426 1.18793 0.93104 0.90826 0.86705 1.86236 1.77378 1.16783 1.38540 1.22458 1.02479 0.81496 0.97517 1.20028 0.79360 0.82393 0.88352 1.90818 1.47083 1.60991 1.39088 1.45781 1.65223 1.06308 1.21019 1.21343 0.99606 0.90613 0.87362 1.22624 0.97140 0.93827 1.00288 0.87378 1.23578 0.96957 0.95957 1.01407 1.22843 0.96476 0.95533 0.81613 0.85854 1.48708 1.29843 1.19934 1.16109 1.22468 0.94363 0.99998 0.92549 1.21569 1.07860 0.99318 1.01504 1.23955 0.95137 0.99316 0.95728 1.77386 1.22723 1.03119 1.08587 1.23458 0.98990 0.96049 0.99032 1.21289 1.06506 1.00412 0.94877 1.21025 0.96258 0.94100 0.97665 1.21068 1.02680 0.94577 0.98584 1.21053 0.96543 0.99955 0.92542 0.78344 0.86428 1.18554 1.18182 0.88891 0.88805 0.76326 0.90802 0.90590 0.89429 0.88491 0.81161 0.83429 0.79968 0.88728 0.89500 0.85290 0.85362 0.85308 0.84758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -2.05 12.88 -35.23 -0.45 -2.50 16 2 C -0.06 -0.14 2.38 36.00 0.09 -0.05 16 3 Si 0.69 0.12 30.25 -169.99 -5.14 -5.02 16 4 C -0.15 -0.22 5.27 -104.47 -0.55 -0.77 16 5 C 0.15 0.26 6.66 -39.21 -0.26 0.00 16 6 O -0.28 -0.82 9.00 -39.34 -0.35 -1.18 16 7 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 8 C 0.51 0.48 7.91 -10.99 -0.09 0.40 16 9 O -0.51 -3.24 16.50 -14.36 -0.24 -3.48 16 10 N -0.73 2.06 5.56 -60.29 -0.33 1.72 16 11 C 0.13 -0.32 5.51 -4.04 -0.02 -0.34 16 12 C -0.12 0.54 3.75 -89.81 -0.34 0.20 16 13 H 0.11 -0.63 8.14 -51.93 -0.42 -1.06 16 14 C -0.14 0.60 6.98 -25.92 -0.18 0.42 16 15 C 0.14 -0.25 5.04 -67.12 -0.34 -0.59 16 16 H 0.12 -0.26 8.14 -51.93 -0.42 -0.69 16 17 N -0.36 -0.48 3.81 -54.07 -0.21 -0.69 16 18 C 0.05 0.02 10.69 -17.22 -0.18 -0.17 16 19 C -0.27 -0.30 10.80 -40.02 -0.43 -0.73 16 20 C 0.04 0.10 12.03 -17.37 -0.21 -0.11 16 21 N -0.30 -1.14 12.58 30.63 0.39 -0.76 16 22 C -0.14 0.36 7.44 -25.92 -0.19 0.16 16 23 C -0.21 0.11 9.04 -39.43 -0.36 -0.24 16 24 C -0.07 0.08 10.04 -39.61 -0.40 -0.32 16 25 C -0.15 0.12 10.04 -39.56 -0.40 -0.28 16 26 C -0.08 0.00 8.66 -39.60 -0.34 -0.34 16 27 H 0.37 0.17 8.70 45.56 0.40 0.57 16 28 H 0.12 0.35 7.83 -51.93 -0.41 -0.05 16 29 H -0.26 -0.32 6.69 56.52 0.38 0.06 16 30 H -0.26 -0.93 7.11 56.52 0.40 -0.53 16 31 H 0.09 -0.32 7.66 -51.93 -0.40 -0.72 16 32 H 0.09 -0.37 7.66 -51.93 -0.40 -0.77 16 33 H 0.40 -2.48 8.47 -40.82 -0.35 -2.82 16 34 H 0.07 -0.10 7.85 -51.93 -0.41 -0.51 16 35 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.09 -0.46 8.14 -51.93 -0.42 -0.88 16 37 H 0.10 -0.40 6.07 -51.93 -0.32 -0.71 16 38 H 0.17 -0.45 6.69 -52.49 -0.35 -0.81 16 39 H 0.15 -0.11 8.06 -52.48 -0.42 -0.53 16 40 H 0.18 -0.10 8.06 -52.48 -0.42 -0.53 16 41 H 0.09 -0.14 8.10 -51.93 -0.42 -0.56 16 42 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 43 H 0.13 -0.40 6.30 -52.49 -0.33 -0.73 16 44 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 45 H 0.13 -0.34 8.06 -52.49 -0.42 -0.77 16 46 H 0.14 -0.19 4.86 -52.48 -0.26 -0.44 16 LS Contribution 384.94 15.07 5.80 5.80 Total: 0.00 -12.36 384.94 -10.81 -23.17 By element: Atomic # 1 Polarization: -8.20 SS G_CDS: -6.26 Total: -14.45 kcal Atomic # 6 Polarization: 1.39 SS G_CDS: -4.02 Total: -2.62 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.16 Total: 0.28 kcal Atomic # 8 Polarization: -6.11 SS G_CDS: -1.04 Total: -7.16 kcal Atomic # 14 Polarization: 0.12 SS G_CDS: -5.14 Total: -5.02 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -12.36 -10.81 -23.17 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.096 kcal (2) G-P(sol) polarization free energy of solvation -12.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.741 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.171 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds