Wall clock time and date at job start Sun Mar 7 2021 06:59:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86294 * 109.47118 * 2 1 4 4 C 1.50694 * 109.47110 * 239.99599 * 2 1 3 5 5 C 1.38271 * 119.94806 * 300.00368 * 4 2 1 6 6 C 1.38142 * 120.05533 * 179.97438 * 5 4 2 7 7 C 1.38730 * 119.95001 * 0.02562 * 6 5 4 8 8 O 1.35890 * 120.06092 * 180.02562 * 7 6 5 9 9 C 1.42903 * 117.00716 * 179.97438 * 8 7 6 10 10 C 1.50692 * 109.47775 * 179.97438 * 9 8 7 11 11 O 1.21280 * 119.99636 * 359.97438 * 10 9 8 12 12 N 1.34771 * 120.00137 * 180.02562 * 10 9 8 13 13 C 1.46500 * 120.00111 * 179.97438 * 12 10 9 14 14 C 1.53005 * 109.47262 * 180.02562 * 13 12 10 15 15 H 1.08991 * 112.85038 * 43.79970 * 14 13 12 16 16 C 1.53777 * 113.61257 * 175.00414 * 14 13 12 17 17 C 1.53779 * 87.08093 * 139.97957 * 16 14 13 18 18 H 1.09004 * 113.61640 * 89.19640 * 17 16 14 19 19 N 1.46504 * 113.61466 * 220.01394 * 17 16 14 20 20 C 1.34951 * 126.03463 * 85.02543 * 19 17 16 21 21 C 1.35320 * 107.74569 * 180.02562 * 20 19 17 22 22 C 1.39866 * 107.91898 * 359.97438 * 21 20 19 23 23 N 1.30844 * 108.20609 * 0.02562 * 22 21 20 24 24 C 1.53781 * 87.08095 * 334.56154 * 17 16 14 25 25 C 1.38736 * 119.88206 * 0.27320 * 7 6 5 26 26 C 1.38145 * 119.94592 * 359.47503 * 25 7 6 27 27 H 0.96702 * 114.00532 * 300.00419 * 1 2 3 28 28 H 1.08997 * 109.46587 * 120.00200 * 2 1 3 29 29 H 1.48500 * 110.00074 * 299.99541 * 3 2 1 30 30 H 1.48500 * 110.00136 * 61.31798 * 3 2 1 31 31 H 1.07998 * 119.97167 * 0.02562 * 5 4 2 32 32 H 1.08002 * 120.02214 * 180.02562 * 6 5 4 33 33 H 1.09005 * 109.46667 * 59.99194 * 9 8 7 34 34 H 1.08999 * 109.46610 * 300.00175 * 9 8 7 35 35 H 0.97003 * 120.00321 * 359.97438 * 12 10 9 36 36 H 1.09004 * 109.47242 * 60.00441 * 13 12 10 37 37 H 1.08999 * 109.47444 * 299.99922 * 13 12 10 38 38 H 1.08992 * 113.61910 * 25.43015 * 16 14 13 39 39 H 1.09000 * 113.68636 * 254.53558 * 16 14 13 40 40 H 1.08004 * 126.12633 * 0.04038 * 20 19 17 41 41 H 1.07993 * 126.03961 * 179.97438 * 21 20 19 42 42 H 1.08004 * 125.89969 * 180.02562 * 22 21 20 43 43 H 1.09005 * 113.61016 * 139.97906 * 24 17 16 44 44 H 1.08995 * 113.61665 * 270.88597 * 24 17 16 45 45 H 1.08000 * 120.02330 * 179.72023 * 25 7 6 46 46 H 1.08005 * 119.96940 * 180.27414 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5965 -2.0343 -1.4481 6 6 2.0553 -2.6876 -2.5755 7 6 2.8531 -2.0146 -3.4894 8 8 3.3052 -2.6549 -4.5995 9 6 4.1214 -1.8996 -5.4971 10 6 4.5259 -2.7683 -6.6601 11 8 4.1524 -3.9209 -6.7147 12 7 5.3034 -2.2647 -7.6389 13 6 5.6971 -3.1093 -8.7693 14 6 6.5719 -2.3010 -9.7297 15 1 7.3212 -1.6995 -9.2152 16 6 7.1406 -3.1316 -10.8922 17 6 6.8594 -1.9178 -11.7935 18 1 7.6878 -1.2111 -11.8453 19 7 6.3339 -2.2759 -13.1133 20 6 5.0395 -2.5077 -13.4162 21 6 4.9716 -2.8077 -14.7340 22 6 6.2689 -2.7570 -15.2543 23 7 7.0865 -2.4386 -14.2836 24 6 5.7698 -1.5197 -10.7839 25 6 3.1926 -0.6882 -3.2656 26 6 2.7270 -0.0378 -2.1393 27 1 -0.3934 0.4417 0.7650 28 1 1.7922 -0.5139 0.8900 29 1 1.5615 2.4678 -1.2085 30 1 1.5878 2.4585 1.2242 31 1 0.9752 -2.5577 -0.7365 32 1 1.7932 -3.7214 -2.7452 33 1 5.0134 -1.5546 -4.9741 34 1 3.5596 -1.0402 -5.8631 35 1 5.6024 -1.3429 -7.5950 36 1 4.8055 -3.4547 -9.2928 37 1 6.2588 -3.9685 -8.4027 38 1 6.5395 -4.0068 -11.1385 39 1 8.2009 -3.3619 -10.7882 40 1 4.2068 -2.4616 -12.7299 41 1 4.0743 -3.0444 -15.2864 42 1 6.5477 -2.9478 -16.2801 43 1 5.7237 -0.4478 -10.5913 44 1 4.7940 -1.9543 -11.0006 45 1 3.8172 -0.1634 -3.9733 46 1 2.9875 0.9961 -1.9669 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567758_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:59:19 Heat of formation + Delta-G solvation = 42.512033 kcal Electronic energy + Delta-G solvation = -27940.782726 eV Core-core repulsion = 23800.683701 eV Total energy + Delta-G solvation = -4140.099025 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.32057 -41.54882 -40.74153 -39.89016 -38.89402 -37.32095 -35.79412 -32.82145 -32.41023 -31.83087 -30.98009 -30.40321 -28.19008 -27.15566 -26.18276 -24.68226 -23.88705 -22.32737 -22.24301 -21.79259 -21.52240 -20.35484 -19.49734 -18.86019 -18.54318 -17.94966 -17.57604 -17.38123 -17.07354 -16.77197 -16.64124 -15.99122 -15.76279 -15.62983 -15.46189 -15.33897 -14.99135 -14.77676 -14.45855 -14.41776 -14.12223 -14.00433 -13.95090 -13.56894 -13.53423 -13.44288 -13.38443 -13.08409 -12.51030 -12.50184 -12.20480 -12.05118 -11.93035 -11.85375 -11.73965 -11.52791 -10.96846 -10.52119 -10.31672 -10.31035 -10.02314 -9.49555 -9.19866 -5.01631 0.29562 0.31838 0.96661 1.24870 1.35587 1.41906 1.54478 1.55126 1.91522 1.98392 2.47101 2.62635 2.94751 3.05263 3.29303 3.32114 3.38685 3.45909 3.68717 3.73402 3.79302 3.82493 3.83666 3.91207 3.92347 3.95545 4.10428 4.25729 4.29069 4.34781 4.36010 4.44160 4.46208 4.53848 4.60258 4.64304 4.65456 4.76014 4.86510 4.95973 4.99815 5.13824 5.15449 5.18433 5.25390 5.52754 5.67635 5.76460 6.08868 6.15602 6.31834 6.41951 6.81656 7.00329 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.679 3.321 4 C -0.110 4.110 5 C -0.050 4.050 6 C -0.145 4.145 7 C 0.133 3.867 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.515 3.485 11 O -0.511 6.511 12 N -0.728 5.728 13 C 0.134 3.866 14 C -0.119 4.119 15 H 0.109 0.891 16 C -0.136 4.136 17 C 0.137 3.863 18 H 0.124 0.876 19 N -0.364 5.364 20 C 0.052 3.948 21 C -0.273 4.273 22 C 0.045 3.955 23 N -0.298 5.298 24 C -0.141 4.141 25 C -0.206 4.206 26 C -0.073 4.073 27 H 0.379 0.621 28 H 0.076 0.924 29 H -0.256 1.256 30 H -0.261 1.261 31 H 0.133 0.867 32 H 0.136 0.864 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.403 0.597 36 H 0.074 0.926 37 H 0.076 0.924 38 H 0.094 0.906 39 H 0.087 0.913 40 H 0.171 0.829 41 H 0.148 0.852 42 H 0.183 0.817 43 H 0.087 0.913 44 H 0.097 0.903 45 H 0.132 0.868 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.895 4.715 2.188 5.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.581 3.419 4 C -0.111 4.111 5 C -0.068 4.068 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.039 4.039 10 C 0.300 3.700 11 O -0.385 6.385 12 N -0.382 5.382 13 C 0.010 3.990 14 C -0.139 4.139 15 H 0.127 0.873 16 C -0.175 4.175 17 C 0.035 3.965 18 H 0.142 0.858 19 N -0.146 5.146 20 C -0.094 4.094 21 C -0.303 4.303 22 C -0.141 4.141 23 N -0.118 5.118 24 C -0.179 4.179 25 C -0.224 4.224 26 C -0.091 4.091 27 H 0.227 0.773 28 H 0.094 0.906 29 H -0.180 1.180 30 H -0.187 1.187 31 H 0.151 0.849 32 H 0.154 0.846 33 H 0.114 0.886 34 H 0.113 0.887 35 H 0.238 0.762 36 H 0.092 0.908 37 H 0.095 0.905 38 H 0.113 0.887 39 H 0.105 0.895 40 H 0.188 0.812 41 H 0.166 0.834 42 H 0.200 0.800 43 H 0.106 0.894 44 H 0.115 0.885 45 H 0.150 0.850 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 3.733 4.439 1.971 6.126 hybrid contribution -1.778 0.415 0.212 1.838 sum 1.955 4.854 2.183 5.670 Atomic orbital electron populations 1.86593 1.17920 1.80107 1.49766 1.24732 0.84361 1.10748 0.98265 0.95201 0.91678 0.74767 0.80299 1.19171 1.00728 0.94631 0.96525 1.20834 0.96457 0.93530 0.95960 1.20512 1.00442 1.01298 0.94112 1.19053 0.94418 0.91096 0.86679 1.86168 1.64340 1.38586 1.30965 1.22462 0.96485 0.94498 0.90435 1.20045 0.78792 0.88101 0.83104 1.90802 1.53001 1.17605 1.77052 1.45781 1.53091 1.16169 1.23188 1.21353 0.98515 0.93268 0.85832 1.22624 0.98525 0.98313 0.94404 0.87330 1.23454 1.03217 0.97489 0.93353 1.22848 0.98599 0.98491 0.76546 0.85840 1.48711 1.04786 1.53265 1.07828 1.22470 0.88166 1.01198 0.97557 1.21569 0.98903 1.15364 0.94415 1.23954 0.91748 0.99331 0.99092 1.77389 1.19980 1.23180 0.91259 1.23583 0.98308 1.02155 0.93904 1.21131 1.06340 0.94211 1.00734 1.20713 0.96441 0.99013 0.92914 0.77268 0.90596 1.18042 1.18656 0.84878 0.84597 0.88586 0.88714 0.76240 0.90806 0.90534 0.88734 0.89479 0.81168 0.83436 0.79972 0.89421 0.88503 0.84974 0.85234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.58 12.74 -35.23 -0.45 -1.03 16 2 C -0.07 0.02 2.81 36.00 0.10 0.12 16 3 Si 0.68 -0.86 29.78 -169.99 -5.06 -5.92 16 4 C -0.11 -0.12 5.42 -104.60 -0.57 -0.68 16 5 C -0.05 -0.07 9.60 -39.60 -0.38 -0.45 16 6 C -0.15 -0.29 9.99 -39.43 -0.39 -0.68 16 7 C 0.13 0.23 6.69 -39.22 -0.26 -0.03 16 8 O -0.29 -0.72 9.67 -39.30 -0.38 -1.10 16 9 C 0.04 -0.07 5.22 36.00 0.19 0.12 16 10 C 0.52 0.20 7.91 -10.99 -0.09 0.11 16 11 O -0.51 -2.92 16.50 -14.35 -0.24 -3.16 16 12 N -0.73 2.39 5.56 -60.29 -0.33 2.06 16 13 C 0.13 -0.38 5.51 -4.04 -0.02 -0.40 16 14 C -0.12 0.58 3.76 -89.80 -0.34 0.24 16 15 H 0.11 -0.68 8.14 -51.93 -0.42 -1.10 16 16 C -0.14 0.40 7.44 -25.92 -0.19 0.20 16 17 C 0.14 -0.27 5.04 -67.12 -0.34 -0.61 16 18 H 0.12 -0.29 8.14 -51.93 -0.42 -0.71 16 19 N -0.36 -0.43 3.81 -54.07 -0.21 -0.64 16 20 C 0.05 0.01 10.69 -17.22 -0.18 -0.17 16 21 C -0.27 -0.28 10.80 -40.01 -0.43 -0.72 16 22 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 23 N -0.30 -1.11 12.58 30.63 0.39 -0.72 16 24 C -0.14 0.63 6.98 -25.92 -0.18 0.44 16 25 C -0.21 0.06 9.04 -39.43 -0.36 -0.30 16 26 C -0.07 0.00 8.66 -39.61 -0.34 -0.34 16 27 H 0.38 -1.09 8.74 45.56 0.40 -0.69 16 28 H 0.08 -0.14 7.96 -51.93 -0.41 -0.56 16 29 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 30 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 31 H 0.13 0.06 8.06 -52.49 -0.42 -0.36 16 32 H 0.14 0.19 8.06 -52.49 -0.42 -0.23 16 33 H 0.10 -0.43 7.65 -51.93 -0.40 -0.82 16 34 H 0.10 -0.39 7.67 -51.93 -0.40 -0.79 16 35 H 0.40 -2.66 8.47 -40.82 -0.35 -3.01 16 36 H 0.07 -0.12 7.84 -51.93 -0.41 -0.53 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.09 -0.17 8.10 -51.93 -0.42 -0.59 16 39 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 40 H 0.17 -0.46 6.69 -52.48 -0.35 -0.81 16 41 H 0.15 -0.11 8.06 -52.49 -0.42 -0.54 16 42 H 0.18 -0.12 8.06 -52.48 -0.42 -0.54 16 43 H 0.09 -0.47 8.14 -51.93 -0.42 -0.89 16 44 H 0.10 -0.41 6.07 -51.93 -0.32 -0.73 16 45 H 0.13 -0.45 6.30 -52.49 -0.33 -0.78 16 46 H 0.13 -0.28 4.87 -52.48 -0.26 -0.53 16 LS Contribution 385.74 15.07 5.81 5.81 Total: 0.00 -12.57 385.74 -10.71 -23.28 By element: Atomic # 1 Polarization: -9.07 SS G_CDS: -6.24 Total: -15.31 kcal Atomic # 6 Polarization: 0.73 SS G_CDS: -4.00 Total: -3.26 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.16 Total: 0.69 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -1.07 Total: -5.29 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.06 Total: -5.92 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -12.57 -10.71 -23.28 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.792 kcal (2) G-P(sol) polarization free energy of solvation -12.571 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.221 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.709 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.280 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds