Wall clock time and date at job start Sun Mar 7 2021 06:59:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86304 * 109.47167 * 2 1 4 4 C 1.50691 * 109.47527 * 120.00589 * 2 1 3 5 5 C 1.38265 * 119.94756 * 64.99837 * 4 2 1 6 6 C 1.38146 * 120.05555 * 180.02562 * 5 4 2 7 7 C 1.38730 * 119.94786 * 359.97438 * 6 5 4 8 8 O 1.35900 * 120.05738 * 180.02562 * 7 6 5 9 9 C 1.42895 * 116.99858 * 179.97438 * 8 7 6 10 10 C 1.53006 * 109.47036 * 179.97438 * 9 8 7 11 11 C 1.50698 * 109.47184 * 180.02562 * 10 9 8 12 12 O 1.21282 * 120.00025 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00035 * 180.02562 * 11 10 9 14 14 C 1.46504 * 119.99735 * 179.97438 * 13 11 10 15 15 C 1.53006 * 109.46883 * 179.97438 * 14 13 11 16 16 H 1.09006 * 112.84599 * 314.66312 * 15 14 13 17 17 C 1.53784 * 113.61503 * 85.85766 * 15 14 13 18 18 C 1.53958 * 87.01341 * 139.95188 * 17 15 14 19 19 H 1.09006 * 113.61163 * 89.20194 * 18 17 15 20 20 N 1.46504 * 113.66503 * 220.06497 * 18 17 15 21 21 C 1.34951 * 126.03487 * 12.28079 * 20 18 17 22 22 C 1.35314 * 107.73897 * 179.83995 * 21 20 18 23 23 C 1.39860 * 107.92412 * 0.42117 * 22 21 20 24 24 N 1.30831 * 108.20498 * 359.73989 * 23 22 21 25 25 C 1.53773 * 113.61550 * 183.47105 * 15 14 13 26 26 C 1.38732 * 119.88742 * 0.27349 * 7 6 5 27 27 C 1.38148 * 119.94147 * 359.47463 * 26 7 6 28 28 H 0.96702 * 113.99655 * 299.99356 * 1 2 3 29 29 H 1.09002 * 109.46695 * 240.00729 * 2 1 3 30 30 H 1.48499 * 109.99745 * 178.68530 * 3 2 1 31 31 H 1.48500 * 109.99936 * 300.00353 * 3 2 1 32 32 H 1.08001 * 119.96989 * 0.02562 * 5 4 2 33 33 H 1.08005 * 120.02441 * 180.02562 * 6 5 4 34 34 H 1.09001 * 109.47626 * 59.99849 * 9 8 7 35 35 H 1.09001 * 109.47255 * 299.99590 * 9 8 7 36 36 H 1.09001 * 109.47002 * 299.99477 * 10 9 8 37 37 H 1.08993 * 109.46955 * 59.99914 * 10 9 8 38 38 H 0.96998 * 119.99962 * 359.97438 * 13 11 10 39 39 H 1.08998 * 109.47135 * 299.99021 * 14 13 11 40 40 H 1.08993 * 109.47378 * 60.00104 * 14 13 11 41 41 H 1.08997 * 113.61313 * 254.52625 * 17 15 14 42 42 H 1.08999 * 113.61227 * 25.43948 * 17 15 14 43 43 H 1.07998 * 126.12811 * 0.02562 * 21 20 18 44 44 H 1.08006 * 126.03234 * 180.16277 * 22 21 20 45 45 H 1.08005 * 125.90051 * 179.76160 * 23 22 21 46 46 H 1.09000 * 113.61456 * 334.56410 * 25 15 14 47 47 H 1.09000 * 113.61704 * 105.38458 * 25 15 14 48 48 H 1.07994 * 120.02770 * 179.72733 * 26 7 6 49 49 H 1.08002 * 119.97243 * 180.27134 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.6841 -2.0606 1.3970 6 6 2.1432 -2.7140 2.5243 7 6 2.8533 -2.0146 3.4892 8 8 3.3064 -2.6553 4.5988 9 6 4.0305 -1.8723 5.5498 10 6 4.4558 -2.7587 6.7222 11 6 5.2189 -1.9328 7.7254 12 8 5.4048 -0.7516 7.5226 13 7 5.6956 -2.5070 8.8477 14 6 6.4380 -1.7041 9.8227 15 6 6.8631 -2.5905 10.9952 16 1 6.0601 -3.2367 11.3501 17 6 8.1902 -3.3305 10.7584 18 6 8.5283 -3.0283 12.2297 19 1 8.1823 -3.7946 12.9235 20 7 9.9281 -2.6547 12.4467 21 6 10.8232 -2.3384 11.4876 22 6 11.9967 -2.0516 12.0972 23 6 11.8151 -2.2070 13.4752 24 7 10.5756 -2.5685 13.6860 25 6 7.5791 -1.8235 12.1193 26 6 3.0957 -0.6589 3.3221 27 6 2.6390 -0.0111 2.1906 28 1 -0.3933 0.4416 0.7651 29 1 1.7922 -0.5137 -0.8901 30 1 3.5346 1.7702 0.0320 31 1 1.5614 2.4679 -1.2085 32 1 1.1316 -2.6047 0.6453 33 1 1.9501 -3.7687 2.6538 34 1 3.3948 -1.0662 5.9162 35 1 4.9154 -1.4495 5.0739 36 1 3.5707 -3.1811 7.1980 37 1 5.0913 -3.5649 6.3562 38 1 5.5473 -3.4517 9.0098 39 1 7.3229 -1.2815 9.3469 40 1 5.8022 -0.8981 10.1890 41 1 8.0663 -4.3926 10.5473 42 1 8.8482 -2.8304 10.0477 43 1 10.6356 -2.3152 10.4243 44 1 12.9130 -1.7589 11.6060 45 1 12.5681 -2.0546 14.2344 46 1 8.0696 -0.9107 11.7814 47 1 6.9620 -1.6695 13.0046 48 1 3.6444 -0.1113 4.0739 49 1 2.8312 1.0433 2.0579 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567758_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:59:22 Heat of formation + Delta-G solvation = 29.396670 kcal Electronic energy + Delta-G solvation = -29583.818906 eV Core-core repulsion = 25287.613537 eV Total energy + Delta-G solvation = -4296.205369 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.28591 -41.39197 -40.85050 -39.78472 -39.12030 -37.17338 -35.71441 -33.46925 -32.59674 -32.03097 -31.44384 -30.98773 -28.89742 -26.90428 -26.51866 -25.55919 -24.38135 -23.36287 -22.21893 -22.17543 -21.74272 -21.30163 -20.17605 -19.49891 -18.51694 -18.30615 -17.58385 -17.50346 -17.18767 -16.94187 -16.71206 -16.44420 -16.20493 -15.90299 -15.67551 -15.50500 -15.37689 -14.94413 -14.69836 -14.66173 -14.45459 -14.38090 -14.27703 -13.93602 -13.79631 -13.56652 -13.40413 -13.25771 -12.99452 -12.85976 -12.77301 -12.26044 -12.21035 -12.04157 -11.83669 -11.77226 -11.71347 -11.62992 -11.53930 -11.03568 -10.41615 -10.37513 -10.15021 -10.04623 -9.52455 -9.21837 -5.01601 0.28007 0.30189 0.93991 1.31821 1.54277 1.58654 1.61960 1.73443 1.91745 1.94711 2.49197 2.65636 3.17612 3.32641 3.54392 3.56336 3.59718 3.66280 3.73246 3.83577 3.87615 3.90924 3.92112 4.02190 4.05807 4.17613 4.26417 4.29528 4.34766 4.44970 4.49782 4.51472 4.59187 4.66028 4.67403 4.71026 4.72255 4.78318 4.79304 4.86389 4.90450 4.97001 4.97436 5.12802 5.17693 5.24176 5.28400 5.41739 5.49386 5.71736 5.73481 6.15175 6.32282 6.47546 6.75708 6.78242 7.17417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.066 4.066 3 Si 0.767 3.233 4 C -0.163 4.163 5 C -0.060 4.060 6 C -0.159 4.159 7 C 0.123 3.877 8 O -0.321 6.321 9 C 0.071 3.929 10 C -0.132 4.132 11 C 0.518 3.482 12 O -0.586 6.586 13 N -0.713 5.713 14 C 0.133 3.867 15 C -0.099 4.099 16 H 0.129 0.871 17 C -0.129 4.129 18 C 0.122 3.878 19 H 0.124 0.876 20 N -0.367 5.367 21 C 0.052 3.948 22 C -0.291 4.291 23 C 0.032 3.968 24 N -0.343 5.343 25 C -0.137 4.137 26 C -0.209 4.209 27 C -0.078 4.078 28 H 0.395 0.605 29 H 0.107 0.893 30 H -0.289 1.289 31 H -0.298 1.298 32 H 0.139 0.861 33 H 0.142 0.858 34 H 0.067 0.933 35 H 0.064 0.936 36 H 0.128 0.872 37 H 0.127 0.873 38 H 0.420 0.580 39 H 0.062 0.938 40 H 0.061 0.939 41 H 0.104 0.896 42 H 0.097 0.903 43 H 0.199 0.801 44 H 0.162 0.838 45 H 0.198 0.802 46 H 0.081 0.919 47 H 0.084 0.916 48 H 0.141 0.859 49 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.094 -3.216 2.002 3.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.176 4.176 3 Si 0.674 3.326 4 C -0.163 4.163 5 C -0.078 4.078 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.235 6.235 9 C -0.004 4.004 10 C -0.172 4.172 11 C 0.305 3.695 12 O -0.466 6.466 13 N -0.365 5.365 14 C 0.009 3.991 15 C -0.118 4.118 16 H 0.147 0.853 17 C -0.167 4.167 18 C 0.021 3.979 19 H 0.142 0.858 20 N -0.149 5.149 21 C -0.094 4.094 22 C -0.320 4.320 23 C -0.153 4.153 24 N -0.164 5.164 25 C -0.176 4.176 26 C -0.228 4.228 27 C -0.096 4.096 28 H 0.245 0.755 29 H 0.124 0.876 30 H -0.217 1.217 31 H -0.226 1.226 32 H 0.156 0.844 33 H 0.160 0.840 34 H 0.085 0.915 35 H 0.082 0.918 36 H 0.146 0.854 37 H 0.145 0.855 38 H 0.258 0.742 39 H 0.080 0.920 40 H 0.079 0.921 41 H 0.123 0.877 42 H 0.116 0.884 43 H 0.216 0.784 44 H 0.180 0.820 45 H 0.215 0.785 46 H 0.099 0.901 47 H 0.103 0.897 48 H 0.159 0.841 49 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -1.417 -2.662 1.860 3.544 hybrid contribution 1.036 -0.363 -0.518 1.213 sum -0.382 -3.025 1.343 3.332 Atomic orbital electron populations 1.86461 1.17292 1.82158 1.50475 1.25035 0.85194 1.10303 0.97057 0.93823 0.77843 0.75963 0.84940 1.20322 1.02735 0.95289 0.97969 1.20980 0.96675 0.93756 0.96437 1.20667 1.01821 1.01363 0.93878 1.19174 0.94541 0.91348 0.87131 1.85957 1.69225 1.38860 1.29444 1.22478 0.95775 0.93761 0.88420 1.21435 1.03094 0.99116 0.93545 1.20629 0.78727 0.87460 0.82636 1.90752 1.59931 1.18225 1.77711 1.45808 1.55971 1.14454 1.20293 1.21266 0.95901 0.93717 0.88193 1.22508 0.97381 0.97695 0.94229 0.85334 1.23583 0.96544 1.03595 0.92980 1.23216 0.75379 0.99160 1.00173 0.85792 1.48978 1.10263 1.52100 1.03533 1.22975 0.89731 0.99500 0.97189 1.21881 1.00609 1.15801 0.93746 1.24343 0.94281 0.98728 0.97998 1.77299 1.08891 1.25372 1.04888 1.23413 0.97277 0.97258 0.99684 1.21429 1.06439 0.93911 1.01017 1.20994 0.96011 0.99872 0.92704 0.75548 0.87596 1.21654 1.22623 0.84356 0.84042 0.91469 0.91772 0.85429 0.85499 0.74186 0.91990 0.92052 0.87713 0.88424 0.78379 0.82033 0.78529 0.90057 0.89697 0.84123 0.83735 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.49 12.83 -148.98 -1.91 -2.40 16 2 C -0.07 -0.02 2.80 71.23 0.20 0.17 16 3 Si 0.77 -0.71 29.80 68.60 2.04 1.33 16 4 C -0.16 -0.20 5.35 -19.85 -0.11 -0.31 16 5 C -0.06 -0.11 9.68 22.25 0.22 0.10 16 6 C -0.16 -0.37 9.99 22.37 0.22 -0.15 16 7 C 0.12 0.40 6.69 22.51 0.15 0.55 16 8 O -0.32 -0.60 10.14 -92.43 -0.94 -1.54 16 9 C 0.07 -0.08 4.03 71.98 0.29 0.21 16 10 C -0.13 0.91 6.07 29.85 0.18 1.09 16 11 C 0.52 -1.27 7.83 87.66 0.69 -0.58 16 12 O -0.59 -4.25 15.98 -3.04 -0.05 -4.30 16 13 N -0.71 6.03 5.56 -463.05 -2.57 3.46 16 14 C 0.13 -0.90 5.50 86.38 0.47 -0.42 16 15 C -0.10 1.08 3.75 -10.27 -0.04 1.04 16 16 H 0.13 -1.86 8.14 -2.38 -0.02 -1.88 16 17 C -0.13 1.34 6.99 31.18 0.22 1.56 16 18 C 0.12 -0.52 5.04 45.58 0.23 -0.29 16 19 H 0.12 -0.58 8.14 -2.38 -0.02 -0.60 16 20 N -0.37 -0.94 3.81 -324.70 -1.24 -2.18 16 21 C 0.05 0.00 10.69 83.54 0.89 0.90 16 22 C -0.29 -0.61 10.80 21.99 0.24 -0.37 16 23 C 0.03 0.15 12.02 85.23 1.02 1.18 16 24 N -0.34 -2.91 12.58 -57.03 -0.72 -3.62 16 25 C -0.14 0.80 7.44 31.12 0.23 1.03 16 26 C -0.21 -0.39 9.04 22.37 0.20 -0.19 16 27 C -0.08 -0.04 8.66 22.26 0.19 0.16 16 28 H 0.39 -2.76 8.70 -74.06 -0.64 -3.40 16 29 H 0.11 0.14 7.96 -2.39 -0.02 0.12 16 30 H -0.29 -1.23 7.11 99.48 0.71 -0.52 16 31 H -0.30 -1.90 7.11 99.48 0.71 -1.19 16 32 H 0.14 0.01 8.06 -2.91 -0.02 -0.01 16 33 H 0.14 -0.03 8.06 -2.91 -0.02 -0.05 16 34 H 0.07 0.01 7.61 -2.39 -0.02 -0.01 16 35 H 0.06 0.03 7.63 -2.39 -0.02 0.01 16 36 H 0.13 -1.35 8.14 -2.39 -0.02 -1.37 16 37 H 0.13 -1.34 8.14 -2.39 -0.02 -1.36 16 38 H 0.42 -6.32 8.47 -92.71 -0.79 -7.11 16 39 H 0.06 -0.25 7.88 -2.39 -0.02 -0.27 16 40 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 41 H 0.10 -1.38 8.14 -2.39 -0.02 -1.40 16 42 H 0.10 -1.00 6.10 -2.39 -0.01 -1.02 16 43 H 0.20 -1.38 6.69 -2.91 -0.02 -1.40 16 44 H 0.16 -0.31 8.06 -2.91 -0.02 -0.33 16 45 H 0.20 -0.07 8.06 -2.91 -0.02 -0.09 16 46 H 0.08 -0.24 8.10 -2.39 -0.02 -0.26 16 47 H 0.08 -0.47 8.14 -2.39 -0.02 -0.48 16 48 H 0.14 -0.01 6.30 -2.91 -0.02 -0.03 16 49 H 0.15 -0.54 4.90 -2.91 -0.01 -0.56 16 Total: 0.00 -26.72 406.84 -0.28 -27.00 By element: Atomic # 1 Polarization: -23.04 SS G_CDS: -0.41 Total: -23.44 kcal Atomic # 6 Polarization: 0.19 SS G_CDS: 5.51 Total: 5.69 kcal Atomic # 7 Polarization: 2.18 SS G_CDS: -4.53 Total: -2.35 kcal Atomic # 8 Polarization: -5.34 SS G_CDS: -2.90 Total: -8.24 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: 2.04 Total: 1.33 kcal Total: -26.72 -0.28 -27.00 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.396 kcal (2) G-P(sol) polarization free energy of solvation -26.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.675 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.999 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds