Wall clock time and date at job start Sun Mar 7 2021 06:59:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86293 * 109.47246 * 2 1 4 4 C 1.50693 * 109.46925 * 120.00629 * 2 1 3 5 5 C 1.38250 * 119.96449 * 244.99589 * 4 2 1 6 6 C 1.38295 * 120.10633 * 180.02562 * 5 4 2 7 7 C 1.38119 * 120.05914 * 0.02562 * 6 5 4 8 8 C 1.38756 * 119.94173 * 359.97438 * 7 6 5 9 9 O 1.35905 * 120.05509 * 180.02562 * 8 7 6 10 10 C 1.42902 * 116.99730 * 359.97438 * 9 8 7 11 11 C 1.52995 * 109.46880 * 180.02562 * 10 9 8 12 12 C 1.53001 * 109.47288 * 179.97438 * 11 10 9 13 13 C 1.50703 * 109.47420 * 180.02562 * 12 11 10 14 14 O 1.21280 * 119.99668 * 359.97438 * 13 12 11 15 15 N 1.34774 * 120.00231 * 180.02562 * 13 12 11 16 16 C 1.46499 * 120.00234 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47084 * 179.97438 * 16 15 13 18 18 H 1.09000 * 112.90903 * 43.74420 * 17 16 15 19 19 C 1.53784 * 113.61330 * 174.99792 * 17 16 15 20 20 C 1.53787 * 87.07923 * 139.97966 * 19 17 16 21 21 H 1.09004 * 113.60869 * 89.20131 * 20 19 17 22 22 N 1.46502 * 113.61178 * 220.01667 * 20 19 17 23 23 C 1.34946 * 126.03571 * 84.72162 * 22 20 19 24 24 C 1.35316 * 107.74556 * 179.83396 * 23 22 20 25 25 C 1.39867 * 107.91809 * 0.42466 * 24 23 22 26 26 N 1.30833 * 108.20508 * 359.73781 * 25 24 23 27 27 C 1.53778 * 87.08035 * 334.56830 * 20 19 17 28 28 C 1.38164 * 119.97909 * 65.25274 * 4 2 1 29 29 H 0.96698 * 113.99973 * 59.99648 * 1 2 3 30 30 H 1.09004 * 109.46523 * 240.00438 * 2 1 3 31 31 H 1.48496 * 110.00337 * 60.00229 * 3 2 1 32 32 H 1.48505 * 110.00142 * 181.32202 * 3 2 1 33 33 H 1.07993 * 119.95088 * 359.97438 * 5 4 2 34 34 H 1.08001 * 119.96811 * 179.97438 * 6 5 4 35 35 H 1.07995 * 120.02974 * 179.97438 * 7 6 5 36 36 H 1.08994 * 109.47096 * 60.00202 * 10 9 8 37 37 H 1.08998 * 109.47024 * 300.00148 * 10 9 8 38 38 H 1.09007 * 109.47490 * 60.00112 * 11 10 9 39 39 H 1.08998 * 109.47400 * 299.99902 * 11 10 9 40 40 H 1.08993 * 109.47282 * 59.99755 * 12 11 10 41 41 H 1.09007 * 109.47064 * 300.00226 * 12 11 10 42 42 H 0.97005 * 119.99833 * 359.97438 * 15 13 12 43 43 H 1.09004 * 109.47092 * 59.99495 * 16 15 13 44 44 H 1.08995 * 109.46661 * 299.99459 * 16 15 13 45 45 H 1.09004 * 113.61451 * 25.43452 * 19 17 16 46 46 H 1.08994 * 113.61477 * 254.52754 * 19 17 16 47 47 H 1.08007 * 126.12388 * 359.97438 * 23 22 20 48 48 H 1.07996 * 126.03750 * 180.15543 * 24 23 22 49 49 H 1.08001 * 125.89546 * 179.71138 * 25 24 23 50 50 H 1.08999 * 113.61111 * 139.98327 * 27 20 19 51 51 H 1.08999 * 113.61280 * 270.79710 * 27 20 19 52 52 H 1.08001 * 120.02708 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 2.6388 -0.0117 2.1908 6 6 3.1015 -0.6610 3.3208 7 6 2.8583 -2.0097 3.4922 8 6 2.1485 -2.7133 2.5296 9 8 1.9074 -4.0403 2.6961 10 6 2.4147 -4.6475 3.8861 11 6 2.0482 -6.1329 3.8968 12 6 2.5918 -6.7832 5.1706 13 6 2.2313 -8.2464 5.1809 14 8 1.6013 -8.7222 4.2603 15 7 2.6083 -9.0261 6.2136 16 6 2.2574 -10.4484 6.2239 17 6 2.8011 -11.0986 7.4976 18 1 2.6343 -10.4923 8.3879 19 6 2.3821 -12.5687 7.6659 20 6 3.8075 -12.8342 8.1787 21 1 3.9153 -12.7038 9.2556 22 7 4.3787 -14.0948 7.6982 23 6 5.0112 -14.2821 6.5210 24 6 5.3896 -15.5797 6.4579 25 6 4.9656 -16.2092 7.6328 26 7 4.3594 -15.3201 8.3770 27 6 4.2457 -11.6079 7.3609 28 6 1.6891 -2.0607 1.3951 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 -0.8901 31 1 1.5617 2.4678 1.2085 32 1 3.5347 1.7702 -0.0322 33 1 2.8311 1.0426 2.0581 34 1 3.6543 -0.1130 4.0695 35 1 3.2203 -2.5164 4.3746 36 1 1.9786 -4.1590 4.7575 37 1 3.4990 -4.5409 3.9146 38 1 2.4846 -6.6211 3.0254 39 1 0.9638 -6.2398 3.8682 40 1 2.1559 -6.2951 6.0423 41 1 3.6762 -6.6762 5.1989 42 1 3.1119 -8.6454 6.9501 43 1 2.6937 -10.9365 5.3523 44 1 1.1731 -10.5552 6.1954 45 1 2.1567 -13.0690 6.7241 46 1 1.6112 -12.7192 8.4215 47 1 5.1861 -13.5302 5.7655 48 1 5.9210 -16.0476 5.6425 49 1 5.1127 -17.2496 7.8823 50 1 4.9791 -10.9828 7.8702 51 1 4.5311 -11.8458 6.3362 52 1 1.1396 -2.6070 0.6427 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567758_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:59:31 Heat of formation + Delta-G solvation = 26.588779 kcal Electronic energy + Delta-G solvation = -31150.166655 eV Core-core repulsion = 26698.301908 eV Total energy + Delta-G solvation = -4451.864747 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.188 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.31769 -41.29798 -40.94498 -39.90921 -39.09057 -37.33074 -35.79579 -34.96595 -32.68132 -32.59098 -31.32525 -30.95807 -29.57235 -27.82384 -27.14894 -26.73276 -24.69284 -23.71642 -23.30057 -22.27328 -21.78091 -21.75856 -21.33691 -20.32753 -18.97804 -18.60851 -18.41238 -17.97691 -17.57825 -17.43243 -17.23346 -16.95278 -16.85687 -16.50258 -15.85403 -15.63181 -15.50991 -15.40120 -15.16070 -14.93657 -14.63112 -14.55193 -14.27352 -14.25321 -14.01580 -13.95286 -13.54894 -13.51930 -13.42933 -13.39415 -13.25233 -13.01866 -12.61645 -12.51710 -12.44288 -12.21008 -12.04939 -12.02799 -11.84395 -11.73165 -11.68406 -11.52894 -10.95033 -10.37326 -10.31768 -10.22513 -9.89791 -9.49665 -9.23499 -4.97322 0.20699 0.40525 0.96651 1.25875 1.51665 1.55241 1.64040 1.82195 1.97098 1.98201 2.26516 2.64120 2.95603 3.06891 3.32484 3.38395 3.40418 3.51671 3.72999 3.73852 3.74204 3.81566 3.86289 3.92492 3.96263 3.97191 4.08010 4.10398 4.13924 4.19682 4.23292 4.27278 4.30637 4.34867 4.37349 4.45367 4.50926 4.55349 4.62253 4.64138 4.66862 4.76617 4.86883 4.91455 4.96885 5.01691 5.10624 5.13586 5.24784 5.28367 5.34904 5.44485 5.67538 5.76325 6.08776 6.31664 6.40313 6.61862 6.81589 7.10897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.074 4.074 3 Si 0.688 3.312 4 C -0.035 4.035 5 C -0.163 4.163 6 C -0.072 4.072 7 C -0.205 4.205 8 C 0.134 3.866 9 O -0.310 6.310 10 C 0.059 3.941 11 C -0.105 4.105 12 C -0.138 4.138 13 C 0.513 3.487 14 O -0.533 6.533 15 N -0.732 5.732 16 C 0.131 3.869 17 C -0.119 4.119 18 H 0.107 0.893 19 C -0.136 4.136 20 C 0.137 3.863 21 H 0.124 0.876 22 N -0.363 5.363 23 C 0.052 3.948 24 C -0.273 4.273 25 C 0.045 3.955 26 N -0.298 5.298 27 C -0.140 4.140 28 C -0.123 4.123 29 H 0.383 0.617 30 H 0.076 0.924 31 H -0.250 1.250 32 H -0.255 1.255 33 H 0.120 0.880 34 H 0.130 0.870 35 H 0.131 0.869 36 H 0.064 0.936 37 H 0.064 0.936 38 H 0.084 0.916 39 H 0.084 0.916 40 H 0.098 0.902 41 H 0.098 0.902 42 H 0.402 0.598 43 H 0.071 0.929 44 H 0.074 0.926 45 H 0.094 0.906 46 H 0.086 0.914 47 H 0.171 0.829 48 H 0.148 0.852 49 H 0.183 0.817 50 H 0.086 0.914 51 H 0.096 0.904 52 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.994 3.683 0.560 4.779 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.185 4.185 3 Si 0.589 3.411 4 C -0.036 4.036 5 C -0.181 4.181 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.089 3.911 9 O -0.224 6.224 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.178 4.178 13 C 0.300 3.700 14 O -0.409 6.409 15 N -0.385 5.385 16 C 0.008 3.992 17 C -0.139 4.139 18 H 0.125 0.875 19 C -0.175 4.175 20 C 0.035 3.965 21 H 0.141 0.859 22 N -0.146 5.146 23 C -0.094 4.094 24 C -0.302 4.302 25 C -0.141 4.141 26 N -0.118 5.118 27 C -0.179 4.179 28 C -0.141 4.141 29 H 0.231 0.769 30 H 0.094 0.906 31 H -0.175 1.175 32 H -0.180 1.180 33 H 0.137 0.863 34 H 0.148 0.852 35 H 0.149 0.851 36 H 0.083 0.917 37 H 0.082 0.918 38 H 0.102 0.898 39 H 0.103 0.897 40 H 0.117 0.883 41 H 0.116 0.884 42 H 0.236 0.764 43 H 0.090 0.910 44 H 0.092 0.908 45 H 0.112 0.888 46 H 0.105 0.895 47 H 0.188 0.812 48 H 0.166 0.834 49 H 0.200 0.800 50 H 0.105 0.895 51 H 0.115 0.885 52 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.346 3.792 1.904 4.848 hybrid contribution 0.970 -0.560 0.076 1.123 sum 3.316 3.232 1.980 5.036 Atomic orbital electron populations 1.86506 1.17001 1.81853 1.49686 1.24735 0.85909 1.10532 0.97274 0.95339 0.80699 0.77869 0.87220 1.19117 0.96798 0.92990 0.94663 1.20806 1.02613 0.99180 0.95453 1.20858 0.97660 0.93799 0.96715 1.21289 1.04727 0.95751 1.00606 1.18987 0.94770 0.82986 0.94377 1.86085 1.74172 1.19793 1.42325 1.22831 0.98713 0.93804 0.86271 1.21232 1.03564 0.91767 0.97769 1.21527 1.03476 0.92418 1.00348 1.20582 0.79039 0.88612 0.81800 1.90766 1.39157 1.75480 1.35506 1.45997 1.58556 1.10010 1.23960 1.21315 1.00834 0.80256 0.96836 1.22621 0.95870 0.96412 0.98963 0.87463 1.23460 0.96541 0.94454 1.03090 1.22854 0.94331 0.78945 1.00368 0.85859 1.48710 1.44089 1.08014 1.13738 1.22467 0.97776 0.98628 0.90536 1.21566 1.12686 0.93956 1.02040 1.23950 0.97214 0.99723 0.93227 1.77385 1.23578 0.89996 1.20880 1.23570 0.97474 0.95320 1.01524 1.20256 1.02847 0.93597 0.97426 0.76939 0.90564 1.17513 1.17953 0.86281 0.85239 0.85087 0.91740 0.91764 0.89771 0.89736 0.88326 0.88356 0.76382 0.91036 0.90790 0.88764 0.89536 0.81188 0.83434 0.79969 0.89493 0.88549 0.84619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.50 12.81 -35.23 -0.45 -0.95 16 2 C -0.07 -0.05 2.79 36.00 0.10 0.05 16 3 Si 0.69 -0.52 29.85 -169.99 -5.07 -5.59 16 4 C -0.04 -0.11 5.38 -104.65 -0.56 -0.68 16 5 C -0.16 -0.47 8.67 -39.56 -0.34 -0.81 16 6 C -0.07 -0.12 10.04 -39.60 -0.40 -0.52 16 7 C -0.21 -0.33 9.04 -39.43 -0.36 -0.68 16 8 C 0.13 0.43 6.69 -39.22 -0.26 0.17 16 9 O -0.31 -0.91 10.14 -19.44 -0.20 -1.11 16 10 C 0.06 -0.04 4.74 37.16 0.18 0.14 16 11 C -0.11 0.05 4.87 -26.73 -0.13 -0.08 16 12 C -0.14 0.42 5.70 -27.88 -0.16 0.26 16 13 C 0.51 -0.08 7.83 -10.99 -0.09 -0.16 16 14 O -0.53 -2.51 15.98 5.56 0.09 -2.42 16 15 N -0.73 2.14 5.56 -60.30 -0.33 1.80 16 16 C 0.13 -0.31 5.51 -4.04 -0.02 -0.33 16 17 C -0.12 0.52 3.75 -89.81 -0.34 0.18 16 18 H 0.11 -0.59 8.14 -51.93 -0.42 -1.02 16 19 C -0.14 0.34 7.44 -25.91 -0.19 0.15 16 20 C 0.14 -0.23 5.04 -67.12 -0.34 -0.57 16 21 H 0.12 -0.24 8.14 -51.93 -0.42 -0.66 16 22 N -0.36 -0.51 3.81 -54.07 -0.21 -0.72 16 23 C 0.05 0.02 10.69 -17.22 -0.18 -0.16 16 24 C -0.27 -0.31 10.80 -40.01 -0.43 -0.74 16 25 C 0.04 0.10 12.02 -17.37 -0.21 -0.11 16 26 N -0.30 -1.17 12.58 30.62 0.39 -0.78 16 27 C -0.14 0.57 6.98 -25.92 -0.18 0.39 16 28 C -0.12 -0.45 9.63 -39.44 -0.38 -0.83 16 29 H 0.38 -1.66 8.74 45.56 0.40 -1.26 16 30 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 31 H -0.25 -0.58 7.05 56.52 0.40 -0.18 16 32 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 33 H 0.12 0.26 4.86 -52.49 -0.26 0.00 16 34 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 35 H 0.13 -0.13 6.30 -52.49 -0.33 -0.46 16 36 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 37 H 0.06 -0.14 7.66 -51.93 -0.40 -0.53 16 38 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 39 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 40 H 0.10 -0.49 8.14 -51.93 -0.42 -0.92 16 41 H 0.10 -0.50 8.14 -51.92 -0.42 -0.93 16 42 H 0.40 -2.35 8.47 -40.82 -0.35 -2.69 16 43 H 0.07 -0.09 7.85 -51.93 -0.41 -0.50 16 44 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 45 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 46 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 47 H 0.17 -0.43 6.69 -52.48 -0.35 -0.79 16 48 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 49 H 0.18 -0.10 8.06 -52.49 -0.42 -0.52 16 50 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 51 H 0.10 -0.38 6.07 -51.93 -0.32 -0.69 16 52 H 0.14 0.44 8.06 -52.49 -0.42 0.01 16 LS Contribution 428.27 15.07 6.45 6.45 Total: 0.00 -12.47 428.27 -11.56 -24.03 By element: Atomic # 1 Polarization: -8.44 SS G_CDS: -7.93 Total: -16.37 kcal Atomic # 6 Polarization: -0.05 SS G_CDS: -4.30 Total: -4.34 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -0.16 Total: 0.30 kcal Atomic # 8 Polarization: -3.92 SS G_CDS: -0.56 Total: -4.48 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.07 Total: -5.59 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -12.47 -11.56 -24.03 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.617 kcal (2) G-P(sol) polarization free energy of solvation -12.466 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.150 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.561 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.028 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.589 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds