Wall clock time and date at job start Sun Mar 7 2021 07:00:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35964 * 117.00092 * 2 1 4 4 C 1.39441 * 120.12149 * 180.02562 * 3 2 1 5 5 O 1.34773 * 133.24129 * 0.02562 * 4 3 2 6 6 C 1.34936 * 110.84418 * 179.97438 * 5 4 3 7 7 C 1.46989 * 125.14138 * 180.02562 * 6 5 4 8 8 O 1.21653 * 119.99719 * 180.02562 * 7 6 5 9 9 N 1.34775 * 120.00036 * 0.02735 * 7 6 5 10 10 C 1.46502 * 119.99625 * 179.97438 * 9 7 6 11 11 C 1.53003 * 109.46868 * 180.02562 * 10 9 7 12 12 H 1.08996 * 112.85093 * 43.80246 * 11 10 9 13 13 C 1.53781 * 113.61523 * 175.00126 * 11 10 9 14 14 C 1.53777 * 87.08160 * 139.97732 * 13 11 10 15 15 H 1.09000 * 113.61369 * 89.19923 * 14 13 11 16 16 N 1.46503 * 113.61782 * 220.01957 * 14 13 11 17 17 C 1.34940 * 126.03757 * 84.99361 * 16 14 13 18 18 C 1.35317 * 107.74438 * 179.77616 * 17 16 14 19 19 C 1.39872 * 107.92021 * 0.23195 * 18 17 16 20 20 N 1.30838 * 108.20312 * 359.97438 * 19 18 17 21 21 C 1.53782 * 87.08335 * 334.56807 * 14 13 11 22 22 C 1.35811 * 109.71584 * 0.27248 * 6 5 4 23 23 C 1.40608 * 119.13971 * 179.97438 * 4 3 2 24 24 C 1.39783 * 120.11772 * 0.02580 * 23 4 3 25 25 C 1.50697 * 120.09511 * 179.97438 * 24 23 4 26 26 O 1.42902 * 109.46937 * 74.95837 * 25 24 23 27 27 Si 1.86297 * 109.47223 * 194.95797 * 25 24 23 28 28 C 1.36633 * 119.81123 * 359.95569 * 24 23 4 29 29 C 1.38261 * 120.12067 * 359.97438 * 3 2 1 30 30 H 1.08998 * 109.47536 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47152 * 299.99813 * 1 2 3 32 32 H 1.08998 * 109.47292 * 59.99544 * 1 2 3 33 33 H 0.96999 * 120.00352 * 359.97438 * 9 7 6 34 34 H 1.08997 * 109.47215 * 60.00446 * 10 9 7 35 35 H 1.09001 * 109.47090 * 299.99857 * 10 9 7 36 36 H 1.08998 * 113.61407 * 25.42959 * 13 11 10 37 37 H 1.08994 * 113.60974 * 254.52723 * 13 11 10 38 38 H 1.08002 * 126.13053 * 0.04913 * 17 16 14 39 39 H 1.08003 * 126.04109 * 180.21059 * 18 17 16 40 40 H 1.08001 * 125.89521 * 179.97438 * 19 18 17 41 41 H 1.09003 * 113.61471 * 139.98366 * 21 14 13 42 42 H 1.09005 * 113.61291 * 270.88113 * 21 14 13 43 43 H 1.07998 * 126.95462 * 179.73905 * 22 6 5 44 44 H 1.09001 * 109.46864 * 314.95847 * 25 24 23 45 45 H 0.96695 * 113.99935 * 60.00164 * 26 25 24 46 46 H 1.48497 * 110.00035 * 180.02562 * 27 25 24 47 47 H 1.48505 * 109.99851 * 301.32081 * 27 25 24 48 48 H 1.07999 * 119.75386 * 180.02562 * 28 24 23 49 49 H 1.08007 * 119.66124 * 0.04455 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2873 -0.0005 5 8 4.4140 0.3573 -0.0016 6 6 5.6318 0.9386 -0.0023 7 6 6.9131 0.2183 -0.0040 8 8 7.9595 0.8387 -0.0040 9 7 6.9286 -1.1293 -0.0055 10 6 8.2057 -1.8471 -0.0078 11 6 7.9435 -3.3545 -0.0099 12 1 7.1561 -3.6462 -0.7048 13 6 9.2207 -4.2018 -0.1351 14 6 8.5944 -5.1562 0.8952 15 1 7.9855 -5.9423 0.4486 16 7 9.5516 -5.6679 1.8792 17 6 9.9228 -5.0512 3.0206 18 6 10.8159 -5.8501 3.6493 19 6 11.0006 -6.9918 2.8625 20 7 10.2451 -6.8824 1.7999 21 6 7.7787 -3.9530 1.3971 22 6 5.4945 2.2897 0.0044 23 6 4.0555 2.5509 -0.0011 24 6 3.2766 3.7116 -0.0005 25 6 3.9382 5.0656 -0.0005 26 8 4.4609 5.3403 -1.3018 27 14 2.6864 6.3685 0.4536 28 6 1.9137 3.6151 -0.0004 29 6 1.2957 2.3726 -0.0005 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 6.0942 -1.6240 -0.0051 34 1 8.7752 -1.5783 0.8819 35 1 8.7732 -1.5762 -0.8981 36 1 10.1168 -3.6969 0.2257 37 1 9.3532 -4.6488 -1.1203 38 1 9.5673 -4.0938 3.3719 39 1 11.3007 -5.6428 4.5918 40 1 11.6540 -7.8204 3.0925 41 1 6.7472 -4.1992 1.6489 42 1 8.2806 -3.3800 2.1769 43 1 6.2874 3.0229 0.0095 44 1 4.7504 5.0731 0.7264 45 1 3.7923 5.3494 -2.0003 46 1 3.3263 7.7085 0.4565 47 1 1.5580 6.3470 -0.5117 48 1 1.3128 4.5125 -0.0004 49 1 0.2174 2.3120 -0.0002 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567758_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:00:39 Heat of formation + Delta-G solvation = 49.340931 kcal Electronic energy + Delta-G solvation = -34150.532170 eV Core-core repulsion = 29435.594796 eV Total energy + Delta-G solvation = -4714.937375 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.156 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -43.77193 -42.29482 -41.08866 -40.51375 -39.74749 -39.13368 -37.12452 -35.95045 -33.67082 -32.75015 -31.95674 -31.17689 -30.96164 -29.19568 -28.29201 -26.91826 -26.32151 -25.32286 -24.02182 -24.01855 -22.25122 -21.97894 -21.81983 -21.62024 -20.33388 -19.72857 -19.05231 -18.69942 -18.26514 -17.86744 -17.78787 -17.26596 -16.98825 -16.87868 -16.61271 -16.23535 -16.06395 -15.88183 -15.82876 -15.45805 -15.33716 -14.82597 -14.67890 -14.59164 -14.54407 -14.34957 -14.21009 -13.87085 -13.51040 -13.43161 -13.42683 -13.29586 -13.26076 -12.99747 -12.48253 -12.34514 -12.26960 -12.13102 -11.90697 -11.72059 -11.66845 -11.65725 -11.44423 -11.03986 -10.61662 -10.39446 -10.37632 -9.84293 -9.52256 -9.02189 -4.89457 -0.68964 0.08441 0.59712 0.94197 1.15102 1.29987 1.58454 1.59079 1.86732 1.88173 1.92322 1.97938 2.12828 2.37946 3.08836 3.20699 3.29406 3.39109 3.53484 3.54526 3.61776 3.64921 3.80787 3.85621 3.86158 3.97310 4.03443 4.12328 4.16567 4.25342 4.32727 4.42038 4.43505 4.46830 4.49381 4.57508 4.64706 4.67578 4.72911 4.76860 4.82485 4.83937 4.85652 4.87067 4.94675 5.03650 5.05787 5.13348 5.20622 5.27558 5.34051 5.56220 5.73888 6.14565 6.16353 6.27369 6.49304 6.75979 6.78924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.332 6.332 3 C 0.138 3.862 4 C 0.022 3.978 5 O -0.179 6.179 6 C -0.032 4.032 7 C 0.601 3.399 8 O -0.547 6.547 9 N -0.700 5.700 10 C 0.131 3.869 11 C -0.103 4.103 12 H 0.125 0.875 13 C -0.133 4.133 14 C 0.125 3.875 15 H 0.124 0.876 16 N -0.367 5.367 17 C 0.052 3.948 18 C -0.290 4.290 19 C 0.032 3.968 20 N -0.342 5.342 21 C -0.131 4.131 22 C -0.114 4.114 23 C -0.096 4.096 24 C -0.100 4.100 25 C -0.089 4.089 26 O -0.548 6.548 27 Si 0.781 3.219 28 C -0.089 4.089 29 C -0.166 4.166 30 H 0.116 0.884 31 H 0.077 0.923 32 H 0.073 0.927 33 H 0.419 0.581 34 H 0.075 0.925 35 H 0.072 0.928 36 H 0.086 0.914 37 H 0.086 0.914 38 H 0.199 0.801 39 H 0.163 0.837 40 H 0.199 0.801 41 H 0.100 0.900 42 H 0.101 0.899 43 H 0.171 0.829 44 H 0.115 0.885 45 H 0.386 0.614 46 H -0.305 1.305 47 H -0.263 1.263 48 H 0.165 0.835 49 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.412 0.678 2.502 9.762 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.246 6.246 3 C 0.092 3.908 4 C -0.026 4.026 5 O -0.081 6.081 6 C -0.082 4.082 7 C 0.387 3.613 8 O -0.426 6.426 9 N -0.351 5.351 10 C 0.008 3.992 11 C -0.122 4.122 12 H 0.143 0.857 13 C -0.172 4.172 14 C 0.023 3.977 15 H 0.142 0.858 16 N -0.149 5.149 17 C -0.094 4.094 18 C -0.319 4.319 19 C -0.153 4.153 20 N -0.164 5.164 21 C -0.170 4.170 22 C -0.135 4.135 23 C -0.097 4.097 24 C -0.101 4.101 25 C -0.197 4.197 26 O -0.356 6.356 27 Si 0.685 3.315 28 C -0.106 4.106 29 C -0.185 4.185 30 H 0.134 0.866 31 H 0.095 0.905 32 H 0.091 0.909 33 H 0.256 0.744 34 H 0.093 0.907 35 H 0.090 0.910 36 H 0.104 0.896 37 H 0.105 0.895 38 H 0.216 0.784 39 H 0.180 0.820 40 H 0.215 0.785 41 H 0.119 0.881 42 H 0.119 0.881 43 H 0.188 0.812 44 H 0.133 0.867 45 H 0.235 0.765 46 H -0.234 1.234 47 H -0.189 1.189 48 H 0.182 0.818 49 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -8.948 0.779 1.387 9.088 hybrid contribution 0.431 -0.103 -0.511 0.676 sum -8.517 0.676 0.876 8.588 Atomic orbital electron populations 1.23484 0.75343 1.06021 1.03139 1.86142 1.24267 1.25773 1.88420 1.17967 0.86111 0.86829 0.99875 1.19178 0.88210 0.87088 1.08107 1.84007 1.12642 1.34957 1.76490 1.21932 0.84047 0.92684 1.09553 1.16644 0.84912 0.82828 0.76940 1.90907 1.31448 1.68353 1.51905 1.45816 1.11556 1.04789 1.72913 1.21494 0.84382 0.90278 1.03059 1.22521 0.99426 0.91942 0.98325 0.85669 1.23409 0.97737 0.96013 1.00059 1.23125 0.89549 0.95727 0.89252 0.85793 1.48957 1.33713 1.14371 1.17877 1.22980 0.98005 1.00463 0.87957 1.21882 1.07727 0.97006 1.05327 1.24357 0.98748 1.00196 0.92016 1.77305 1.12725 1.02164 1.24198 1.23578 1.01821 0.93950 0.97601 1.22853 0.95363 0.94523 1.00737 1.19576 0.92348 0.92819 1.04987 1.19547 0.93467 0.93879 1.03218 1.25378 1.07710 0.98669 0.87932 1.86607 1.38959 1.92796 1.17261 0.93902 0.75406 0.73489 0.88725 1.20882 0.92930 0.98834 0.97986 1.21369 1.01803 0.89616 1.05670 0.86619 0.90481 0.90891 0.74375 0.90682 0.90965 0.89563 0.89485 0.78405 0.81962 0.78456 0.88125 0.88075 0.81183 0.86686 0.76451 1.23361 1.18854 0.81822 0.80358 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.35 10.50 -93.15 -0.98 -1.33 16 3 C 0.14 0.24 6.70 22.57 0.15 0.39 16 4 C 0.02 0.13 7.35 23.14 0.17 0.30 16 5 O -0.18 -1.15 10.28 -13.46 -0.14 -1.28 16 6 C -0.03 -0.21 7.07 24.00 0.17 -0.04 16 7 C 0.60 3.77 7.80 86.54 0.67 4.44 16 8 O -0.55 -7.05 16.83 -4.20 -0.07 -7.12 16 9 N -0.70 0.76 5.55 -466.78 -2.59 -1.83 16 10 C 0.13 -0.44 5.51 86.38 0.48 0.04 16 11 C -0.10 0.80 3.75 -10.27 -0.04 0.76 16 12 H 0.13 -1.31 8.14 -2.39 -0.02 -1.33 16 13 C -0.13 0.57 7.44 31.12 0.23 0.80 16 14 C 0.12 -0.31 5.04 45.52 0.23 -0.08 16 15 H 0.12 -0.35 8.14 -2.39 -0.02 -0.37 16 16 N -0.37 -1.39 3.81 -324.99 -1.24 -2.63 16 17 C 0.05 0.06 10.69 83.54 0.89 0.95 16 18 C -0.29 -0.85 10.80 21.99 0.24 -0.61 16 19 C 0.03 0.18 12.03 85.24 1.03 1.21 16 20 N -0.34 -3.22 12.58 -57.02 -0.72 -3.93 16 21 C -0.13 1.00 6.98 31.12 0.22 1.21 16 22 C -0.11 -0.80 10.68 23.79 0.25 -0.55 16 23 C -0.10 -0.50 6.16 -20.24 -0.12 -0.63 16 24 C -0.10 -0.05 5.26 -19.87 -0.10 -0.15 16 25 C -0.09 0.03 2.70 71.24 0.19 0.23 16 26 O -0.55 -1.74 12.88 -148.98 -1.92 -3.66 16 27 Si 0.78 -3.34 30.25 68.60 2.08 -1.26 16 28 C -0.09 0.35 8.62 22.02 0.19 0.54 16 29 C -0.17 0.67 9.03 22.40 0.20 0.88 16 30 H 0.12 -1.20 8.14 -2.39 -0.02 -1.22 16 31 H 0.08 -0.86 7.66 -2.38 -0.02 -0.88 16 32 H 0.07 -0.77 7.66 -2.39 -0.02 -0.79 16 33 H 0.42 -2.07 8.19 -92.71 -0.76 -2.83 16 34 H 0.07 -0.17 7.84 -2.39 -0.02 -0.19 16 35 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 36 H 0.09 -0.19 8.10 -2.39 -0.02 -0.21 16 37 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 38 H 0.20 -1.13 6.69 -2.91 -0.02 -1.15 16 39 H 0.16 -0.20 8.06 -2.91 -0.02 -0.22 16 40 H 0.20 0.05 8.06 -2.91 -0.02 0.03 16 41 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 42 H 0.10 -0.81 6.07 -2.38 -0.01 -0.83 16 43 H 0.17 1.14 8.06 -2.91 -0.02 1.12 16 44 H 0.12 -0.04 7.96 -2.39 -0.02 -0.06 16 45 H 0.39 -1.25 8.70 -74.06 -0.64 -1.90 16 46 H -0.31 -1.31 7.11 99.48 0.71 -0.61 16 47 H -0.26 0.90 6.69 99.48 0.67 1.56 16 48 H 0.16 -1.48 4.81 -2.91 -0.01 -1.49 16 49 H 0.18 -1.95 6.26 -2.91 -0.02 -1.97 16 Total: 0.00 -27.33 412.85 0.20 -27.12 By element: Atomic # 1 Polarization: -14.40 SS G_CDS: -0.38 Total: -14.78 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: 6.16 Total: 10.70 kcal Atomic # 7 Polarization: -3.84 SS G_CDS: -4.55 Total: -8.39 kcal Atomic # 8 Polarization: -10.28 SS G_CDS: -3.11 Total: -13.39 kcal Atomic # 14 Polarization: -3.34 SS G_CDS: 2.08 Total: -1.26 kcal Total: -27.33 0.20 -27.12 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.463 kcal (2) G-P(sol) polarization free energy of solvation -27.326 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.204 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.122 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds