Wall clock time and date at job start Sun Mar 7 2021 07:00:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33811 * 122.45383 * 2 1 4 4 C 1.50703 * 124.52075 * 359.97438 * 3 2 1 5 5 O 1.42900 * 109.46948 * 46.27730 * 4 3 2 6 6 Si 1.86297 * 109.47049 * 166.27648 * 4 3 2 7 7 S 1.70621 * 110.95903 * 179.97438 * 3 2 1 8 8 C 1.75835 * 91.55848 * 0.02562 * 7 3 2 9 9 C 1.46583 * 125.45411 * 179.97438 * 8 7 3 10 10 O 1.21703 * 119.99959 * 180.02562 * 9 8 7 11 11 N 1.34776 * 120.00426 * 0.02562 * 9 8 7 12 12 C 1.46498 * 120.00283 * 180.02562 * 11 9 8 13 13 C 1.52992 * 109.47276 * 180.02562 * 12 11 9 14 14 H 1.08997 * 112.90965 * 316.25761 * 13 12 11 15 15 C 1.53960 * 113.66433 * 87.55078 * 13 12 11 16 16 C 1.53788 * 87.11026 * 139.89124 * 15 13 12 17 17 H 1.08997 * 113.68800 * 89.20048 * 16 15 13 18 18 N 1.46500 * 113.61216 * 220.09010 * 16 15 13 19 19 C 1.34942 * 126.03961 * 12.49998 * 18 16 15 20 20 C 1.35319 * 107.74380 * 179.97438 * 19 18 16 21 21 C 1.39866 * 107.92115 * 359.97438 * 20 19 18 22 22 N 1.30835 * 108.20154 * 359.74505 * 21 20 19 23 23 C 1.53778 * 113.61569 * 184.99970 * 13 12 11 24 24 C 1.36641 * 109.08604 * 0.23839 * 8 7 3 25 25 H 1.08998 * 109.46900 * 84.17744 * 1 2 3 26 26 H 1.08995 * 109.47194 * 204.18297 * 1 2 3 27 27 H 1.09008 * 109.46429 * 324.17810 * 1 2 3 28 28 H 1.08994 * 109.47060 * 286.27348 * 4 3 2 29 29 H 0.96695 * 114.00312 * 59.99959 * 5 4 3 30 30 H 1.48507 * 110.00142 * 179.97438 * 6 4 3 31 31 H 1.48504 * 110.00351 * 301.31870 * 6 4 3 32 32 H 0.96996 * 119.99769 * 0.02562 * 11 9 8 33 33 H 1.09006 * 109.47000 * 60.00372 * 12 11 9 34 34 H 1.09004 * 109.47162 * 300.00353 * 12 11 9 35 35 H 1.09000 * 113.53716 * 25.34187 * 15 13 12 36 36 H 1.09002 * 113.74485 * 254.46874 * 15 13 12 37 37 H 1.08000 * 126.12948 * 359.95297 * 19 18 16 38 38 H 1.07998 * 126.03617 * 180.02562 * 20 19 18 39 39 H 1.08002 * 125.89737 * 180.02562 * 21 20 19 40 40 H 1.08998 * 113.61708 * 105.47458 * 23 13 12 41 41 H 1.08992 * 113.61667 * 334.65366 * 23 13 12 42 42 H 1.08007 * 123.35510 * 179.75639 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1291 0.0000 4 6 1.6356 2.5161 -0.0006 5 8 0.5919 2.5904 0.9727 6 14 2.9629 3.7551 0.4163 7 16 3.8970 0.7891 0.0007 8 6 3.5936 -0.9429 0.0002 9 6 4.6230 -1.9864 0.0000 10 8 4.3000 -3.1598 -0.0008 11 7 5.9273 -1.6466 0.0006 12 6 6.9560 -2.6895 -0.0002 13 6 8.3411 -2.0397 0.0014 14 1 8.4175 -1.2019 -0.6916 15 6 8.8742 -1.7245 1.4110 16 6 10.2501 -2.1960 0.9114 17 1 10.8505 -1.4020 0.4675 18 7 10.9921 -2.9877 1.8957 19 6 10.4915 -3.5093 3.0352 20 6 11.4935 -4.1680 3.6622 21 6 12.6456 -4.0453 2.8788 22 7 12.3448 -3.3428 1.8168 23 6 9.4951 -3.0486 -0.1221 24 6 2.2446 -1.1601 -0.0058 25 1 -0.3633 0.1043 -1.0224 26 1 -0.3633 -0.9374 0.4210 27 1 -0.3632 0.8334 0.6015 28 1 1.2288 2.7376 -0.9872 29 1 0.8824 2.4043 1.8760 30 1 2.3945 5.1271 0.4185 31 1 3.5477 3.4451 1.7457 32 1 6.1847 -0.7114 0.0016 33 1 6.8456 -3.3081 -0.8909 34 1 6.8451 -3.3100 0.8891 35 1 8.4507 -2.3601 2.1887 36 1 8.8417 -0.6652 1.6658 37 1 9.4736 -3.4172 3.3843 38 1 11.4168 -4.6960 4.6012 39 1 13.6150 -4.4625 3.1085 40 1 9.9635 -3.0579 -1.1062 41 1 9.2427 -4.0466 0.2359 42 1 1.8018 -2.1453 -0.0112 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567758_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:00:44 Heat of formation + Delta-G solvation = 74.593073 kcal Electronic energy + Delta-G solvation = -25182.626823 eV Core-core repulsion = 21451.753374 eV Total energy + Delta-G solvation = -3730.873448 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.114 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.29843 -41.00573 -40.14399 -39.59209 -37.57658 -35.74615 -32.83390 -32.18682 -30.94216 -30.22870 -29.18820 -27.13722 -26.36367 -24.83441 -23.97467 -22.27769 -21.80738 -21.63249 -20.41438 -20.25925 -19.41093 -18.45713 -17.84267 -17.22236 -17.20248 -16.86615 -16.67110 -16.30412 -15.94904 -15.56221 -15.39107 -15.19197 -14.94092 -14.65906 -14.49492 -14.34040 -13.98456 -13.92313 -13.58449 -13.51366 -13.40654 -13.19871 -13.12779 -12.89438 -12.52032 -12.42569 -12.38537 -12.02000 -11.83183 -11.82477 -11.51487 -11.14678 -10.86508 -10.30350 -10.29934 -9.81699 -9.48107 -9.47154 -5.27591 -0.67387 0.22755 0.61901 0.98274 1.00674 1.26663 1.40655 1.53457 1.74919 1.93464 1.99616 2.13520 2.97392 3.07596 3.08149 3.34264 3.42194 3.47558 3.67848 3.77225 3.95007 3.98319 4.08449 4.13039 4.27408 4.32010 4.35645 4.37474 4.47297 4.52368 4.56845 4.62500 4.66834 4.76704 4.78062 4.82209 4.88453 4.99350 5.02675 5.15004 5.21943 5.34425 5.40798 5.77782 6.10471 6.13154 6.26262 6.83123 7.02992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.088 4.088 3 C -0.237 4.237 4 C -0.031 4.031 5 O -0.517 6.517 6 Si 0.653 3.347 7 S 0.195 5.805 8 C -0.260 4.260 9 C 0.592 3.408 10 O -0.524 6.524 11 N -0.727 5.727 12 C 0.133 3.867 13 C -0.121 4.121 14 H 0.109 0.891 15 C -0.142 4.142 16 C 0.138 3.862 17 H 0.124 0.876 18 N -0.363 5.363 19 C 0.052 3.948 20 C -0.273 4.273 21 C 0.044 3.956 22 N -0.297 5.297 23 C -0.135 4.135 24 C -0.048 4.048 25 H 0.070 0.930 26 H 0.065 0.935 27 H 0.091 0.909 28 H 0.129 0.871 29 H 0.379 0.621 30 H -0.233 1.233 31 H -0.241 1.241 32 H 0.399 0.601 33 H 0.078 0.922 34 H 0.074 0.926 35 H 0.096 0.904 36 H 0.088 0.912 37 H 0.171 0.829 38 H 0.148 0.852 39 H 0.183 0.817 40 H 0.087 0.913 41 H 0.094 0.906 42 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.339 3.864 -0.329 3.893 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.101 4.101 3 C -0.356 4.356 4 C -0.143 4.143 5 O -0.324 6.324 6 Si 0.551 3.449 7 S 0.464 5.536 8 C -0.380 4.380 9 C 0.378 3.622 10 O -0.402 6.402 11 N -0.379 5.379 12 C 0.010 3.990 13 C -0.140 4.140 14 H 0.127 0.873 15 C -0.180 4.180 16 C 0.035 3.965 17 H 0.142 0.858 18 N -0.145 5.145 19 C -0.094 4.094 20 C -0.303 4.303 21 C -0.142 4.142 22 N -0.118 5.118 23 C -0.174 4.174 24 C -0.082 4.082 25 H 0.089 0.911 26 H 0.084 0.916 27 H 0.109 0.891 28 H 0.146 0.854 29 H 0.227 0.773 30 H -0.156 1.156 31 H -0.165 1.165 32 H 0.234 0.766 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.115 0.885 36 H 0.106 0.894 37 H 0.188 0.812 38 H 0.165 0.835 39 H 0.200 0.800 40 H 0.105 0.895 41 H 0.113 0.887 42 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 1.759 5.275 -1.469 5.752 hybrid contribution -2.053 -1.240 1.680 2.929 sum -0.294 4.035 0.211 4.051 Atomic orbital electron populations 1.20759 0.88812 1.03871 1.03214 1.18727 0.98381 0.90643 1.02325 1.24330 0.98283 1.00764 1.12263 1.24413 0.97690 0.95424 0.96770 1.86591 1.34142 1.91822 1.19842 0.95441 0.81692 0.80493 0.87288 1.82663 1.03469 0.98628 1.68876 1.24606 0.97937 0.96890 1.18556 1.16943 0.81565 0.87427 0.76261 1.90874 1.81596 1.18197 1.49485 1.45823 1.05400 1.10348 1.76337 1.21361 0.84447 0.89887 1.03310 1.22662 0.93524 1.00025 0.97784 0.87308 1.23619 0.93421 1.03342 0.97622 1.22844 0.90651 0.93951 0.89010 0.85806 1.48711 1.07508 1.41064 1.17256 1.22467 1.00298 0.97984 0.88630 1.21565 0.92944 1.11086 1.04694 1.23950 1.00002 0.98027 0.92182 1.77384 0.92287 1.19325 1.22795 1.23445 0.94809 0.98863 1.00323 1.20754 0.90929 1.00145 0.96338 0.91104 0.91610 0.89066 0.85368 0.77270 1.15640 1.16493 0.76624 0.90407 0.90728 0.88524 0.89375 0.81178 0.83460 0.79984 0.89466 0.88742 0.82757 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.06 9.74 36.01 0.35 0.41 16 2 C -0.09 -0.01 5.75 -106.45 -0.61 -0.62 16 3 C -0.24 0.23 5.61 -35.86 -0.20 0.03 16 4 C -0.03 0.06 2.68 36.01 0.10 0.15 16 5 O -0.52 0.48 10.27 -35.23 -0.36 0.12 16 6 Si 0.65 -1.57 30.97 -169.99 -5.26 -6.84 16 7 S 0.19 -0.40 19.33 -107.50 -2.08 -2.47 16 8 C -0.26 -0.18 6.45 -36.79 -0.24 -0.42 16 9 C 0.59 1.11 7.78 -12.90 -0.10 1.01 16 10 O -0.52 -3.01 16.84 5.19 0.09 -2.93 16 11 N -0.73 1.09 5.55 -61.65 -0.34 0.74 16 12 C 0.13 -0.28 5.51 -4.05 -0.02 -0.30 16 13 C -0.12 0.51 3.76 -89.72 -0.34 0.17 16 14 H 0.11 -0.60 8.14 -51.93 -0.42 -1.02 16 15 C -0.14 0.56 6.99 -25.82 -0.18 0.38 16 16 C 0.14 -0.24 5.04 -67.11 -0.34 -0.58 16 17 H 0.12 -0.26 8.14 -51.93 -0.42 -0.69 16 18 N -0.36 -0.48 3.81 -54.07 -0.21 -0.69 16 19 C 0.05 0.02 10.69 -17.22 -0.18 -0.16 16 20 C -0.27 -0.31 10.80 -40.01 -0.43 -0.74 16 21 C 0.04 0.09 12.03 -17.37 -0.21 -0.11 16 22 N -0.30 -1.14 12.58 30.62 0.39 -0.75 16 23 C -0.14 0.36 7.43 -25.92 -0.19 0.17 16 24 C -0.05 -0.05 9.78 -40.44 -0.40 -0.45 16 25 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.06 -0.06 8.10 -51.93 -0.42 -0.48 16 27 H 0.09 -0.04 5.54 -51.92 -0.29 -0.33 16 28 H 0.13 -0.32 7.96 -51.93 -0.41 -0.74 16 29 H 0.38 -1.30 8.70 45.56 0.40 -0.90 16 30 H -0.23 -0.12 7.11 56.52 0.40 0.29 16 31 H -0.24 0.14 7.11 56.52 0.40 0.55 16 32 H 0.40 -1.54 7.59 -40.82 -0.31 -1.85 16 33 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.07 -0.09 7.84 -51.93 -0.41 -0.50 16 35 H 0.10 -0.37 6.07 -51.93 -0.32 -0.69 16 36 H 0.09 -0.42 8.14 -51.93 -0.42 -0.85 16 37 H 0.17 -0.44 6.69 -52.49 -0.35 -0.79 16 38 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 39 H 0.18 -0.10 8.06 -52.49 -0.42 -0.53 16 40 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 41 H 0.09 -0.15 8.10 -51.93 -0.42 -0.57 16 42 H 0.15 0.18 8.06 -52.48 -0.42 -0.24 16 LS Contribution 363.22 15.07 5.47 5.47 Total: 0.00 -9.07 363.22 -10.83 -19.91 By element: Atomic # 1 Polarization: -5.96 SS G_CDS: -5.53 Total: -11.50 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -3.00 Total: -1.07 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.16 Total: -0.70 kcal Atomic # 8 Polarization: -2.53 SS G_CDS: -0.27 Total: -2.81 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.26 Total: -6.84 kcal Atomic # 16 Polarization: -0.40 SS G_CDS: -2.08 Total: -2.47 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -9.07 -10.83 -19.91 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567758_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.500 kcal (2) G-P(sol) polarization free energy of solvation -9.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.833 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.907 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.593 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds